Strain data

Search for keyword=[polyamine].
Weissella confusa
JCM number: 1093 <-- T. Mitsuoka S8-9 <-- DSM 20196 <-- ATCC 10881 (Leuconostoc mesenteroides) <-- C. S. McCleskey 548-D.
Source: Sugar cane [018,5135].
Biochemistry/Physiology: [3808].
Cell wall: Lys-Ala [021,3808].
G+C (mol%): 45 (Tm) [020], 46.6 (HPLC) [2433].
DNA-DNA relatedness: [3808,5135].
Phylogeny: 16S rRNA (M23036), 16S rRNA gene (AB023241, AB596944, LC063164), [2983,3808,5135].
Other taxonomic data: Whole-cell protein profile [5135].
Genome sequence: JQAY00000000.
More information: Cellular polyamines [6386].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD19708.
  
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Publication(s) using this strain [A06038, A07006, A12417, A16119, A22094, A22095, A24446].
Patent publication(s) using this strain [JP2008-263971A, JP2010-081935A, 2021-193933].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides simplex
JCM number: 1363 <-- K. Suzuki CNF 035 <-- AJ 1420 <-- ATCC 6946 <-- NCTC 4215 <-- H. L. Jensen.
Source: Soil [274].
Morphology: [252].
Biochemistry/Physiology: [255,381].
Cell wall: LL-A2pm, Gly [377,378]; LL-A2pm-Gly [251,375]; N-acetyl Mur [276]; glycerol teichoic acid (Glc) [2883].
Fatty acid: [643,1015,1074,1090], contains 2OH acids [238,243,1012,1013,1014,1016,1017].
Quinone: MK-8(H4) [263,376,1074,1090].
Polar lipid: [264,1074,1090].
G+C (mol%): 74.0 [382], 71.7 (Tm) [125], 74.4 (Tm) [380], 73.0 (Tm) [381], 72.9 (genome sequence) [12227].
DNA-DNA relatedness: [259,381].
Phylogeny: 16S rRNA catalog [273], 16S rRNA (M37693), 16S rRNA gene (AF005009, X53213, Z78212) [2561,4327,5213], 5S rRNA (M16174) [2499], RNase P RNA gene (AF110040) [4865].
Other taxonomic data: Protein profile [223]; 16S-23S rRNA ITS (AF017494) [4385]; Rapid identification primers [4387]; Polyamine [4623].
Taxonomy: [250,256,274,388,1090,2561].
Genome sequence: BJMC00000000, FOUK00000000.
More information: Oxidizes cholesterol [383,384,385,386,387]; Carbohydrate catabolism [183].
  
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Publication(s) using this strain [B05227, A06238, A09118].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides jensenii
JCM number: 1364 <-- K. Suzuki CNF 091 <-- IAM 12581 <-- NCIB 9770 <-- C. W. Evans <-- H. L. Jensen.
Source: Soil [389].
Biochemistry/Physiology: [381].
Cell wall: LL-A2pm-Gly [251,375]; glycerol teichoic acid (Gal) [2883].
Fatty acid: [381,643].
Quinone: MK-8(H4) [381].
G+C (mol%): 68.8 (Tm) [381].
DNA-DNA relatedness: [381].
Phylogeny: 16S rRNA gene (AF005006, X53214, Z78210) [2561,4327,5213], RNase P RNA gene (AF110038) [4865].
Other taxonomic data: 16S-23S rRNA ITS (AF017491) [4385]; Rapid identification primers [4387]; Polyamine [4623].
Taxonomy: [2561].
Genome sequence: BCRJ00000000.
More information: Degrades dinitro-o-cresol herbicides [389].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12678.
Publication(s) using this strain [B05227].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Terrabacter tumescens
JCM number: 1365 <-- IAM 12345 <-- CCM 1655 <-- MRI.
Source: Garden soil [274].
Morphology: [252].
Biochemistry/Physiology: [255,381].
Cell wall: LL-A2pm, Gly [377,378], LL-A2pm-Gly3 [251,375]; glycerol teichoic acid (Glc) [2883].
Fatty acid: [380,643,1074,1090].
Quinone: MK-8(H4) [376,381,1074,1090].
G+C (mol%): 72.4 [382], 69.8 (Tm) [125], 74.7, 75.2 (Tm) [380], 71.3 (Tm) [381].
DNA-DNA relatedness: [381].
Phylogeny: 16S rRNA gene (AF005023, X53215, X83812) [2561,3946], RNase P RNA gene (AF110049) [4865].
Other taxonomic data: Protein profile [223]; 16S-23S rRNA ITS (AF017510) [4385]; Polyamine [4623].
Taxonomy: [221,250,256,274,381,1090,2561].
Genome sequence: BMNZ00000000.
Publication(s) using this strain [A04007].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Eubacterium barkeri
JCM number: 1389 <-- ATCC 25849 <-- L. DS. Smith VPI 5359.
Source: Mud, the Potomac River, USA [2706].
Biochemistry/Physiology: [2706].
G+C (mol%): 45.0 (Tm) [1375].
Phylogeny: 16S rRNA (M23927) [3997,4034], 16S rRNA gene (LC036314).
Other taxonomic data: Protein profile [2652]; Polyamine [4622].
Genome sequence: FNOU00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD15807.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium butyricum
JCM number: 1391 <-- ATCC 19398 <-- NCTC 7423 <-- J. W. Howie strain Rowett.
This strain is not exported outside Japan.
Biosafety level 2.
Source: Intestine of swine.
Biochemistry/Physiology: [4516].
G+C (mol%): 28.0 (Tm) [639].
DNA-DNA relatedness: [1385].
Phylogeny: 16S rRNA (M59085), [1376,4033,4434], 16S rRNA gene (AB595129, AJ458420).
Other taxonomic data: Protein profile [2652]; Polyamine [4622]; SDS-PAGE [4516].
Taxonomy: [10984].
Genome sequence: AP019716, AP019717 (plasmid pCBU1), AP019718 (plasmid pCBU2), AP019719 (plasmid pCBU3), AQQF00000000 [10741].
More information: PFGE [4516].
Production: Butyricin 7423 [1382].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD18620.
  
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Publication(s) using this strain [A05009, A06045, A09238, A10272, A12041, A12071, A15143, A15170, A17473, A17518, A18129, A18166, A21512, A22193, A22195, A24150].
Patent publication(s) using this strain [JP2007-112805A, CN102041274, WO2017/033925].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium acetobutylicum
JCM number: 1419 <-- IAM 19013 <-- S. Sugama <-- ATCC 824 <-- E. R. Weyer.
Biochemistry/Physiology: [5118].
G+C (mol%): 28.0 (Tm) [1385], 33.4 (HPLC) [5118].
DNA-DNA relatedness: [5118].
Phylogeny: 16S rRNA gene (AB595131, S46735, U16166, X78070) [4431,5118].
Other taxonomic data: Polyamine [4622].
Genome sequence: AE001437, AE001438 (plasmid pSOL1) [5028].
Production: Butanol and acetone.
Assay: p-Aminobenzoic acid.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08097.
  
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Publication(s) using this strain [A07004, A11015, A11028].
Patent publication(s) using this strain [JP2007-000811A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Blautia producta
JCM number: 1471 <-- T. Mitsuoka S10-45.
Source: Human feces.
Biochemistry/Physiology: [7395].
Phylogeny: 16S rRNA gene (AB600998, D14144, X94966) [3530].
Genome sequence: ARET00000000, AUUC00000000, CP048626 [12942].
More information: Celluar polyamines [6386].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07421.
  
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Publication(s) using this strain [A05178, A08278, A09007, A09198, A10272, A11238, A11280, A12041, A12295, A12391, A12422, A15117, A15128, A15143, A16074, A16093, A18008, A18129, A18166, A19497, A20145, A20166, A20502, A21182, A21483, A21512, A22109, A22197, A22524, A23117, A23172, A23252, A23488, A24131, A24342].
Patent publication(s) using this strain [JP2013-184956A, WO/2013/031973 , 2015-71604, WO2017/073753, 2020-54279, 2020-58319, 2023-36988, P2024-56920A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chitinophaga arvensicola
JCM number: 2836 <-- H. Oyaizu M64 <-- T. Harada.
Source: Soil.
Morphology: Granular surface [2068].
Biochemistry/Physiology: [2068].
Fatty acid: i-C15:0, C16:1 (Δ11) [2068,6556].
Quinone: MK-7 [2068].
G+C (mol%): 46.0 (Tm) [2068].
Phylogeny: 16S rRNA gene (AM237311, D12657).
Other taxonomic data: Polyamine [5054].
Taxonomy: [2068,6556].
Genome sequence: FOJG00000000.
More information: Decomposes succinoglycan [2068].
  
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Publication(s) using this strain [A04168, A07177, A15404].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chitinophaga arvensicola
JCM number: 2871 <-- H. Oyaizu 469 <-- K. Kato.
Source: Rhizosphere of cucumber root.
Biochemistry/Physiology: [2068].
Fatty acid: i-C15:0, C16:1 (Δ11) [2068].
Quinone: MK-7 [2068].
G+C (mol%): 43.3 (Tm) [2068].
Other taxonomic data: Polyamine [5054].
Taxonomy: [2068].
More information: Decomposes succinoglycan [2068].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinoplanes philippinensis
JCM number: 3001 <-- KCC A-0001 <-- T. Furumai <-- T. Yamaguchi <-- J. N. Couch P-15.
Source: Rice paddy soil, the Philippines [794].
Biochemistry/Physiology: [794,1827,2867].
Numerical taxonomy: [2867].
Cell wall: A2pm [2963], chemotype II D [1818]; N-glycolyl Mur [2330,4176].
Fatty acid: [2330,2867].
Quinone: MK-9(H4), MK-10(H4) [916,2330], MK-9(H4) [2867].
Polar lipid: [2330].
G+C (mol%): 72.1 (chemical) [752], 71.4 (genome sequence) [12227].
DNA-DNA relatedness: [762].
Phylogeny: 16S rRNA catalog [2331,2858], 16S rRNA gene (D85474, U58525, X72864, X93187) [4127,4183,4211], gyrB (AB014132) [4682].
Other taxonomic data: Ribosomal protein [3544,3947]; Polyamine [2349].
Genome sequence: FONV00000000.
Publication(s) using this strain [A05223, A07276, A11245].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbispora rosea
JCM number: 3006 <-- KCC A-0006 <-- NI 9096 <-- Y. Ohara M-20.
Source: Garden soil, Kofu City, Yamanashi Pref., Japan [796].
Morphology: [2370].
Biochemistry/Physiology: [778,796,2352,4632].
Cell wall: Chemotype III B [991,2435]; N-acetyl Mur [993,4176].
Fatty acid: [2879,3324,4632,4958].
Quinone: MK-9(H2), MK-9(III,VIII-H4), MK-9 [2609,2879,3324].
Polar lipid: Type PIV [756,2879].
G+C (mol%): 71.1 (chemical) [752]; 71 (Tm) [2879]; 69.9 (HPLC) [4632]; 71.2 (genome sequence) [12227].
DNA-DNA relatedness: [752,2879,4632,14707].
Phylogeny: 16S rRNA gene [4183], gyrB (KF540069) [10625]; Phylogenomic analysis [14707].
Other taxonomic data: Polyamine [2349].
Taxonomy: [2879].
Genome sequence: FTNI00000000.
Publication(s) using this strain [A11245, A15227, A16034, A16221, A18334, A19016, A20017, A20185, B24323].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces purpurogeneiscleroticus
JCM number: 3080 <-- KCC A-0080 <-- IPV 1528 <-- HACC 186 (M. J. Thirumalachar C-3).
Source: Soil, Pimpri, India [692].
Biochemistry/Physiology: [692,693].
Numerical taxonomy: [760,2933].
Quinone: MK-9(H8) [916].
Phylogeny: 16S rRNA gene (AB184250, AB184544, AJ621604).
Other taxonomic data: Phage typing [910]; Polyamine [2349].
Taxonomy: [2340].
Genome sequence: LGEI00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermomonospora curvata
JCM number: 3096 <-- KCC A-0096 <-- A. Henssen B9.
Source: Straw [702].
Biochemistry/Physiology: [702,1053,2338].
Numerical taxonomy: [1053].
Cell wall: Chemotype III C [1296,2338]; N-acetyl Mur [4176].
Fatty acid: [2338].
Quinone: MK-9(H6), MK-9(H8) [3176].
G+C (mol%): 71.64 (genome sequence) [8556,12227].
Phylogeny: 16S rRNA catalog [2331,2858], 16S rRNA gene (AB588631, AF002262, D86945, X97893) [4183,4212,4333].
Other taxonomic data: Polyamine [2349]; Ribosomal protein [3952]; 16S-23S rRNA ITS (AF134112) [4887].
Genome sequence: CP001738 [8556].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08115.
Publication(s) using this strain [A17556, A22405].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Intrasporangium calvum
JCM number: 3097 <-- KCC A-0097 <-- CUB 430 <-- H. A. Lechevalier <-- L. V. Kalakoutskii 7 KIP.
Source: Air [698].
Morphology: [1057].
Biochemistry/Physiology: [698,8946,9056].
Cell wall: Chemotype I [991]; N-acetyl Mur [4176]; Gal, Man, Glc [9056].
Fatty acid: i-C14:0, i-C15:0, a-C15:0, i-C16:0, i-C16:1 [5213,8946,9056].
Quinone: MK-8 [916], MK-8(H4) [8946,9056].
Polar lipid: Type PIV [756], PE, DPG, PG, PI, PIM, NPG [9056].
G+C (mol%): 68.2 (HPLC) [5213], 68.8 (HPLC) [9056], 70.7 (genome sequence) [8554,12227].
DNA-DNA relatedness: [9056].
Phylogeny: 16S rRNA gene (AJ566282, D85486) [4183], RNase P RNA gene (AF110051) [4865].
Other taxonomic data: Polyamine [4623].
Genome sequence: CP002343 [8554].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces purpurogeneiscleroticus
JCM number: 3103 <-- KCC A-0103 <-- RIA 886 <-- HACC 186 (M. J. Thirumalachar C-3).
Source: Soil, Pimpri, India [692].
Biochemistry/Physiology: [692,693].
Numerical taxonomy: [760,2933].
Quinone: MK-9(H8) [916].
Phylogeny: 16S rRNA gene (AB184250, AB184544, AJ621604).
Other taxonomic data: Phage typing [910]; Polyamine [2349].
Taxonomy: [2340].
Genome sequence: LGEI00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
This product was produced by the KCC (Kaken Pharm. Co., Ltd.) Culture Collection of Actinomycetes (KCC) and transferred to JCM in 1983. Viability and purity assays were performed by KCC at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the nuclear ITS region of the rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbispora aerata
JCM number: 3110 <-- KCC A-0110 <-- H. Nonomura M2-59.
Source: Soil [705].
Biochemistry/Physiology: [705,2338,4632].
Cell wall: Chemotype III B [2338].
Fatty acid: [2320,2338,2879].
Quinone: MK-9(H2), MK-9(H4) [2320,2338,2609,2879].
Polar lipid: Type PIV [2879].
G+C (mol%): 67 (Tm) [2320]; 72 (Tm) [2879]; 70.3 (HPLC) [4632].
DNA-DNA relatedness: [2320,2879,4632].
Phylogeny: 16S rRNA gene [4125].
Other taxonomic data: Polyamine [2349].
Taxonomy: [2879].
More information: Type strain of Microbispora thermodiastatica [705].
  
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Publication(s) using this strain [A16047].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbispora aerata
JCM number: 3111 <-- KCC A-0111 <-- CBS 836.70 <-- IFO 14047 <-- H. Nonomura M2-64.
Source: Soil [705].
Biochemistry/Physiology: [705,4632].
Fatty acid: [2879].
Quinone: MK-9, MK-9(H2), MK-9(H4) [2609], MK-9(H4), MK-9(H6), MK-9(H2) [2879].
Polar lipid: Type PIV [2879].
G+C (mol%): 72 (Tm) [2879]; 70.1 (HPLC) [4632].
DNA-DNA relatedness: [2879,4632].
Phylogeny: 16S rRNA gene [4125].
Other taxonomic data: Polyamine [2349].
Taxonomy: [2879].
More information: Type strain of Microbispora thermorosea [705].
Publication(s) using this strain [A16047].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Laceyella sacchari
JCM number: 3137 <-- KCC A-0137 <-- J. Lacey A978.
Source: Sugar cane bagasse, Trinidad, West Indies, Trinidad and Tobago [1120].
Biochemistry/Physiology: [1120,2897].
Numerical taxonomy: [1053].
Cell wall: Chemotype III C [1053].
Fatty acid: [5899].
Quinone: MK-9, MK-8 [2897].
G+C (mol%): 48 (HPLC) [5899].
DNA-DNA relatedness: [4798].
Phylogeny: 16S rRNA gene (AF138737, AJ251779) [4746].
Other taxonomic data: Polyamine [2349]; Ribosomal protein [3952]; Genome-to-genome distances, average nucleotide identity [12633].
Taxonomy: [5899,12633].
Genome sequence: SMDD00000000.
Publication(s) using this strain [A19254].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Micromonospora purpureochromogenes
JCM number: 3156 <-- KCC A-0156 <-- IMRU 3343.
Source: Adobe soil, CA, USA.
Biochemistry/Physiology: [710,2334].
Cell wall: meso-A2pm, a trace of LL-A2pm, Gly; Xyl, Ara, Rha; N-glycolyl Mur [993].
G+C (mol%): 73.0 (HPLC) [5900], 72.98 (genome sequence) [12236].
DNA-DNA relatedness: [4682].
Phylogeny: 16S rRNA gene (X92611) [4119], gyrB (AB014161) [4682].
Other taxonomic data: Polyamine [2349].
Genome sequence: LT607410 [12236].
Publication(s) using this strain [B04003, B05135, B05188, B11086, B16433].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermoactinomyces vulgaris
JCM number: 3162 <-- KCC A-0162 <-- E. Küster MVD (Webley's strain D).
Biochemistry/Physiology: [1150,2897].
Fatty acid: [5899].
Quinone: MK-7 [2897].
G+C (mol%): 48 (HPLC) [5899].
DNA-DNA relatedness: [4798].
Phylogeny: 16S rRNA gene (AF089891, AF138739, M77491) [4746], 5S rRNA (X55252) [3962].
Other taxonomic data: Polyamine [2349]; Ribosomal protein [3952].
Genome sequence: REFP00000000.
Publication(s) using this strain [A15324, A19218].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides albus
JCM number: 3185 <-- KCC A-0185 <-- IMET 7807 <-- H. Prauser 652-48.
Source: Soil, Tihany, Hungary [727].
Biochemistry/Physiology: [727].
Cell wall: A2pm [2963], chemotype I [381,727]; N-acetyl Mur [4176].
Fatty acid: [381,1074,1090,4275].
Quinone: MK-8(H4) [381,1090].
Polar lipid: Type PI [756].
G+C (mol%): 68.6 (Tm) [381].
DNA-DNA relatedness: [381].
Phylogeny: 16S rRNA gene (AF004988, X53211) [2561,4327], RNase P RNA gene (AF110036) [4865], 5S rRNA (X55260).
Other taxonomic data: Phage typing [727]; Rapid identification primers [4387]; Polyamine [4623]; 16S-23S rRNA ITS (AF017470) [4385].
Genome sequence: BMQT00000000.
Publication(s) using this strain [B05227, A16025, B16394, A22281, A24447].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Laceyella sacchari
JCM number: 3214 <-- KCC A-0214 <-- CUB 618 <-- J. Lacey A978.
Source: Sugar cane bagasse, Trinidad, West Indies, Trinidad and Tobago [1120].
Biochemistry/Physiology: [1120,2897].
Numerical taxonomy: [1053].
Cell wall: Chemotype III C [1053].
Fatty acid: [5899].
Quinone: MK-9, MK-8 [2897].
G+C (mol%): 48 (HPLC) [5899].
DNA-DNA relatedness: [4798].
Phylogeny: 16S rRNA gene (AF138737, AJ251779) [4746].
Other taxonomic data: Polyamine [2349]; Ribosomal protein [3952]; Genome-to-genome distances, average nucleotide identity [12633].
Taxonomy: [5899,12633].
Genome sequence: SMDD00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinopolyspora halophila
JCM number: 3278 <-- KCC A-0278 <-- ATCC 27976 <-- T. J. Novitsky <-- M. Gochnauer.
Source: Contaminant of complex medium for Halobacterium [765].
Morphology: [2799].
Biochemistry/Physiology: [765,2893].
Cell wall: [1789], chemotype IV A [765,1277]; cell wall sugars [3312]; N-acetyl Mur [4176].
Fatty acid: [765,2377,2893].
Quinone: MK-9(H4) [2070], MK-9(H4), MK-10(H4) [2377,2893].
Polar lipid: [765,2377,2893].
G+C (mol%): 64.2 (UV) [765], 68 (HPLC) [2893], 68.0 (genome sequence) [12227].
DNA-DNA relatedness: [2862,2893].
Phylogeny: 16S rRNA gene (X54287) [2479,2862].
Other taxonomic data: Ribosomal protein [2932,3656]; Polyamine [2349].
Genome sequence: AQUI00000000.
More information: Growth conditions [1788]; Enzyme activity [1788].
Production: β-Lactamase [1790].
Publication(s) using this strain [A13060].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Nocardia pseudosporangifera"
JCM number: 3288 <-- KCC A-0288 <-- IAM 501 <-- N. Seto and H. Iizuka 2-40.
Source: Soil, Nishiyama oil field, Niigata Pref., Japan [1219].
Biochemistry/Physiology: [1219].
Numerical taxonomy: [2866].
Phylogeny: 16S rRNA gene (Z37136).
Other taxonomic data: Mycolic acid [4767]; Polyamine [2349].
More information: Utilizes alkanes and hydrogen gas [1219].
Publication(s) using this strain [A09268].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinomadura citrea
JCM number: 3295 <-- KCC A-0295 <-- MS 2135 <-- ATCC 27887 <-- INA 1849.
Source: Soil [847].
Biochemistry/Physiology: [847,1222].
Numerical taxonomy: [987,2414,2899].
Cell wall: Chemotype III B [847,1567,2875].
Fatty acid: [1567,2320,2875,2879,4958].
Quinone: MK-9(H6) [889,1567,2320], MK-9(H6), MK-9(H8), MK-9(H4) [2875].
Polar lipid: [2875].
G+C (mol%): 67.6 (Tm) [1567], 68 (Tm) [2320].
DNA-DNA relatedness: [1567,2320,2879].
Phylogeny: 16S rRNA gene (AJ420139, U49001) [4125].
Other taxonomic data: Polyamine [2349]; 16S-23S rRNA ITS (AF134091) [4887].
Genome sequence: JACCBT000000000, BMRD00000000.
Publication(s) using this strain [B08172, A11016].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dactylosporangium matsuzakiense
JCM number: 3311 <-- KCC A-0311 <-- Meiji Seika Kaisha, Ltd.; SF-2052.
Source: Soil, Matsuzaki, Izu Peninsula, Japan [1496].
Biochemistry/Physiology: [1496].
Cell wall: Chemotype II D (3OH-A2pm) [1496].
Phylogeny: 16S rRNA gene (D86940, X93193) [4127,4183], gyrB (AB014104) [4682].
Other taxonomic data: Polyamine [2349].
Genome sequence: BAAAXA010000000, BSFP00000000.
Production: Dactimicin [1496].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides luteus
JCM number: 3358 <-- IMET 7830 <-- H. Prauser 939-9.
Source: Soil [2164].
Biochemistry/Physiology: [2164].
Fatty acid: [1074,1090,4275].
Quinone: MK-8(H4) [1074,1090].
G+C (mol%): 67.5 (Tm) [2164].
DNA-DNA relatedness: [2164].
Phylogeny: 16S rRNA gene (AF005007, X53212) [2561,4327], RNase P RNA gene (AF110037) [4865].
Other taxonomic data: Rapid identification primers [4387]; Polyamine [4623]; 16S-23S rRNA ITS (AF017492) [4385].
Genome sequence: BMRK00000000.
Publication(s) using this strain [B05227].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thiobacillus thioparus
JCM number: 3860 <-- Y. Katayama THI112 <-- Y. Katayama and H. Kuraishi TK21.
Source: Activated sludge of the treatment of coke-oven liquor [2140].
Biochemistry/Physiology: [2140].
Fatty acid: C16:0, C16:1+ΔC17:0, 3OH-C10:0, 3OH-C12:0 [2142].
Quinone: Q-8 [2142].
G+C (mol%): 61.0 (Tm) [2140,2143].
Other taxonomic data: Polyamine [4995].
Taxonomy: Group III-1 [2142].
More information: Degrading activity of thiocyanate [2140].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acidithiobacillus ferrooxidans
JCM number: 3863 <-- Y. Katayama THI132 <-- ATCC 19859 <-- NCIB 9490 <-- P. Trussell.
Source: Mine water.
Fatty acid: C16:0, C16:1+ΔC17:0, C18:1+ΔC19:0, 3OH-C14:0 [2142].
Quinone: Q-8 [2142].
G+C (mol%): 58 (Tm) [2287].
DNA-DNA relatedness: [2287].
Other taxonomic data: Polyamine [4995].
Taxonomy: Group III-3 [2142].
Publication(s) using this strain [A04038, A05058, A07220, A12397, A18182, A20090, A24372].
Patent publication(s) using this strain [2019-154435, 2022-146325].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acidithiobacillus thiooxidans
JCM number: 3868 <-- Y. Katayama THI143 <-- M. Yagisawa <-- ATCC 15494 <-- J. D. Corrick CPB-25.
Source: Continuous waters of copper mines.
Fatty acid: C16:0, C16:1+ΔC17:0, C18:1+ΔC19:0, 3OH-C14:0 [2142].
Quinone: Q-8 [2142].
Other taxonomic data: Polyamine [4995].
Taxonomy: Group III-3 [2142].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thiobacillus denitrificans
JCM number: 3869 <-- Y. Katayama THI151 <-- ATCC 23642 <-- D. White 4G <-- NCIB 9546 <-- M. Hutchinson.
Source: Lagoon system treating carbonization effluent.
Fatty acid: C16:0, C16:1+ΔC17:0, 3OH-C10:0, 3OH-C12:0 [2142].
Quinone: Q-8 [2142].
G+C (mol%): 63.3 (Tm) [2143].
DNA-DNA relatedness: [2143].
Other taxonomic data: Polyamine [4995].
Taxonomy: Group III-1 [2142].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thiobacillus denitrificans
JCM number: 3870 <-- Y. Katayama THI152 <-- ATCC 23644 <-- D. White <-- NCIB 9548 <-- M. Hutchinson.
Source: Domestic sewage.
Fatty acid: C16:0, C16:1+ΔC17:0, 3OH-C10:0, 3OH-C12:0 [2142].
Quinone: Q-8 [2142].
Phylogeny: 16S rRNA gene (AJ243144).
Other taxonomic data: Polyamine [4995].
Taxonomy: Group III-1 [2142].
Genome sequence: AQWL00000000.
Publication(s) using this strain [A08222, A17086, A22556].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinoalloteichus cyanogriseus
JCM number: 4014 <-- KCC S-0014 <-- Y. Okami <-- T. Yamaguchi <-- NRRL B-1623.
Source: Rice straw.
Biochemistry/Physiology: [693].
Numerical taxonomy: [2933].
Cell wall: meso-A2pm [891].
G+C (mol%): 72.5 (genome sequence) [12227].
DNA-DNA relatedness: [7538].
Phylogeny: 16S rRNA gene (AB184345) [7538]; Concatenated 163 conserved core genes [13513].
Other taxonomic data: Polyamine [2349]; Average amino acid identity [13513]; Average nucleotide identity [13513]; Genome-to-genome distances [12227,13513].
Taxonomy: Reclassification [7538].
Genome sequence: JOAL00000000, JODV00000000.
More information: Type strain of Streptomyces caeruleus [693] and Actinoalloteichus caeruleus [13513].
Publication(s) using this strain [A08116].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces griseus
JCM number: 4047 <-- KCC S-0047 <-- Y. Okami (NIHJ 106) <-- IMRU 3463.
Biochemistry/Physiology: [687,2350].
Numerical taxonomy: [760,2933,3738,4207].
Cell wall: A2pm [2963].
Fatty acid: [2354,3738].
Quinone: MK-9(H8), MK-9(H6) [2332,3738], MK-9(H6) [2354].
G+C (mol%): 71 (UV) [755], 71.0 (Tm) [1567], 72 (HPLC) [6080], 72.2 (genome sequence) [12227].
DNA-DNA relatedness: [755,1567,2891,6053].
Phylogeny: 16S, 23S and 5S rRNA gene (M76388, X55435, X61478) [3959,3960], 16S rRNA gene (AB184211, AB184699, AF056711, AY094371, AY207604) [5731], 5S rRNA (M59345, X17368) [2959], gyrB (AB014119, HQ995515) [9236].
Other taxonomic data: Ribosomal protein [3544,3785]; Polyamine [2349]; rRNA-DNA relatedness [2608].
Taxonomy: Emended description [6053].
Genome sequence: FNTW00000000, MDDL00000000, UAVD00000000.
Production: Streptomycin [899].
Publication(s) using this strain [A06238].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermoviolaceus subsp. apingens
JCM number: 4312 <-- KCC S-0312 <-- A. Henssen R89 (A34).
Source: Fresh horse-swine mixed manure, Berlin, Germany [702].
Morphology: [1539].
Biochemistry/Physiology: [220].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (AB184685, Z68095) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Polyamine [2349].
Genome sequence: BMSR00000000.
Publication(s) using this strain [A24373].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermovulgaris
JCM number: 4338 <-- KCC S-0338 <-- A. Henssen R10.
Source: Fresh cow manure, Berlin, Germany [702].
Biochemistry/Physiology: [685].
Numerical taxonomy: [760,2381,2933,4207].
Quinone: MK-9(H8) [4555].
Polar lipid: PE, DPG, PI, PIDM [4555].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (Z68094) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Ribosomal protein [3785]; Polyamine [2349].
Genome sequence: MUME00000000.
Publication(s) using this strain [A04040].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudonocardia autotrophica
JCM number: 4348 <-- KCC S-0348 <-- IFO 12743 <-- SAJ <-- ISP 5011 <-- A. Takamiya aa-1-1.
Morphology: [2799].
Biochemistry/Physiology: [083,740,1795,4334].
Numerical taxonomy: [2933].
Cell wall: Chemotype IV A [1795]; cell wall sugars [3312].
Fatty acid: [2799,4334].
Quinone: MK-8(H4), MK-8(H2) [1795], MK-8(H4) [2294,2332,2799].
Polar lipid: [2799], type PIII [1795,4334].
G+C (mol%): 70 (Tm) [1795], 72 (Tm) [2816], 73.0 (genome sequence) [12227].
DNA-DNA relatedness: [2862].
Phylogeny: 16S rRNA gene (AJ252824, EU928972, X54288) [2378,2479,2862,3545,4782].
Other taxonomic data: Ribosomal protein [2932,3656]; Polyamine [2349].
Taxonomy: [3545].
Genome sequence: AP018920, AP018921 (plasmid pPA12743CP), MIGB00000000, SNWB00000000.
  
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Publication(s) using this strain [A11017, A16082].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces anulatus
JCM number: 4355 <-- KCC S-0355 <-- IFO 12755 <-- SAJ <-- ISP 5128 <-- P. Wilde Schön 192.
Biochemistry/Physiology: [740].
Numerical taxonomy: [760,2933].
G+C (mol%): 72 (UV) [755].
DNA-DNA relatedness: [755].
Phylogeny: 16S rRNA gene (AB184120, AY999838), gyrB (HQ995509) [9236].
Other taxonomic data: Polyamine [2349].
Production: Actinomycin C.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces albidoflavus
JCM number: 4357 <-- KCC S-0357 <-- IFO 12854 <-- SAJ <-- ISP 5233 <-- CBS R. Müller's strain.
Biochemistry/Physiology: [687,2350,2405,5170].
Numerical taxonomy: [760,2933].
G+C (mol%): 73 (UV) [755], 72.8 (Bd), 73 (Tm) [2853].
DNA-DNA relatedness: [755,2891,5170,8103].
Phylogeny: 16S rRNA gene (AB184196, Z76678) [4220].
Other taxonomic data: Protein profile [2892]; Polyamine [2349]; 16S-23S rRNA ITS [4220]; rRNA-DNA relatedness [2608].
Taxonomy: [8103].
Genome sequence: PKLQ00000000.
More information: Type strain of Streptomyces coelicolor [687,2405].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07092.
Publication(s) using this strain [A09254].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermovulgaris
JCM number: 4520 <-- KCC S-0520 <-- IFO 13089 <-- SAJ <-- ISP 5444 <-- A. Henssen R10.
Source: Fresh cow manure, Berlin, Germany [702].
Biochemistry/Physiology: [685].
Numerical taxonomy: [760,2381,2933,4207].
Quinone: MK-9(H8) [4555].
Polar lipid: PE, DPG, PI, PIDM [4555].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (Z68094) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Ribosomal protein [3785]; Polyamine [2349].
Genome sequence: MUME00000000.
Publication(s) using this strain [A04219].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces griseus
JCM number: 4644 <-- KCC S-0644 <-- IFO 12875 <-- SAJ <-- ISP 5236 <-- IMRU 3463.
Biochemistry/Physiology: [687,2350].
Numerical taxonomy: [760,2933,3738,4207].
Cell wall: A2pm [2963].
Fatty acid: [2354,3738].
Quinone: MK-9(H8), MK-9(H6) [2332,3738], MK-9(H6) [2354].
G+C (mol%): 71 (UV) [755], 71.0 (Tm) [1567], 72 (HPLC) [6080], 72.2 (genome sequence) [12227].
DNA-DNA relatedness: [755,1567,2891,6053].
Phylogeny: 16S, 23S and 5S rRNA gene (M76388, X55435, X61478) [3959,3960], 16S rRNA gene (AB184211, AB184699, AF056711, AY094371, AY207604) [5731], 5S rRNA (M59345, X17368) [2959], gyrB (AB014119, HQ995515) [9236].
Other taxonomic data: Ribosomal protein [3544,3785]; Polyamine [2349]; rRNA-DNA relatedness [2608].
Taxonomy: Emended description [6053].
Genome sequence: FNTW00000000, MDDL00000000, UAVD00000000.
Production: Streptomycin [899].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinoalloteichus cyanogriseus
JCM number: 4730 <-- KCC S-0730 <-- IFO 13344 <-- SAJ <-- ISP 5103 <-- E. Baldacci IPV 930.
Source: Rice straw.
Biochemistry/Physiology: [693].
Numerical taxonomy: [2933].
Cell wall: meso-A2pm [891].
G+C (mol%): 72.5 (genome sequence) [12227].
DNA-DNA relatedness: [7538].
Phylogeny: 16S rRNA gene (AB184345) [7538]; Concatenated 163 conserved core genes [13513].
Other taxonomic data: Polyamine [2349]; Average amino acid identity [13513]; Average nucleotide identity [13513]; Genome-to-genome distances [12227,13513].
Taxonomy: Reclassification [7538].
Genome sequence: JOAL00000000, JODV00000000.
More information: Type strain of Streptomyces caeruleus [693] and Actinoalloteichus caeruleus [13513].
Delivery category: Domestic, A or C; Overseas, A or C.
This product was produced by the KCC (Kaken Pharm. Co., Ltd.) Culture Collection of Actinomycetes (KCC) and transferred to JCM in 1983. Viability and purity assays were performed by KCC at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the nuclear ITS region of the rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces purpurogeneiscleroticus
JCM number: 4818 <-- KCC S-0818 <-- IFO 13358 <-- SAJ <-- ISP 5271 <-- HACC 186 (M. J. Thirumalachar C-3).
Source: Soil, Pimpri, India [692].
Biochemistry/Physiology: [692,693].
Numerical taxonomy: [760,2933].
Quinone: MK-9(H8) [916].
Phylogeny: 16S rRNA gene (AB184250, AB184544, AJ621604).
Other taxonomic data: Phage typing [910]; Polyamine [2349].
Taxonomy: [2340].
Genome sequence: LGEI00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
This product was produced by the KCC (Kaken Pharm. Co., Ltd.) Culture Collection of Actinomycetes (KCC) and transferred to JCM in 1983. Viability and purity assays were performed by KCC at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the nuclear ITS region of the rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermodiastaticus
JCM number: 4840 <-- KCC S-0840 <-- IFO 13468 <-- SAJ <-- ISP 5573 <-- CUB 387 <-- J. R. Denison.
Biochemistry/Physiology: [693].
Numerical taxonomy: [760,2933].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (AB018095, AB018096, AB249928, Z68101) [4123,4789].
DNA typing: Ribotyping [4555].
Other taxonomic data: Polyamine [2349].
Genome sequence: BNBV00000000.
Publication(s) using this strain [A04040, A24373].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Streptomyces thermoolivaceus subsp. thermoolivaceus"
JCM number: 4920 <-- KCC S-0920 <-- X. Yan T354.
Source: Manure [1547].
Biochemistry/Physiology: [1547].
Other taxonomic data: Polyamine [2349].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptococcus pyogenes
JCM number: 5674 <-- ATCC 12344 <-- R. Lancefield typing strain T1 <-- F. Griffith SF 130.
Biosafety level 2.
Source: Scarlet fever.
Phylogeny: 16S rRNA [3808], 16S rRNA gene (AB002521, LC071824).
Genome sequence: LN831034.
More information: Cellular polyamines [6386].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12769.
  
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Publication(s) using this strain [A05204, A07173, A15197, A17004, A18499, A20133, A21512, A22383, A22384].
Patent publication(s) using this strain [WO2010/101237, 2015-164416, 2015-38108, 2016-104726, AU2015215750, 2017-000985].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Enterococcus faecalis
JCM number: 5803 <-- DSM 20478 <-- NCDO 581 <-- NIRD (strain Tissier).
Biosafety level 2.
Biochemistry/Physiology: [1853].
Cell wall: [2149,2153].
Serology: Group D.
G+C (mol%): 38.6 (Tm) [1853].
DNA-DNA relatedness: [1853,2062].
Phylogeny: 16S rRNA gene (AB012212, AJ301831, AJ420803, DQ411814, LC071830, LC096215).
Genome sequence: ASDA00000000.
More information: Cellular polyamines [6386].
  
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Publication(s) using this strain [A04149, A04168, A04170, A04172, A04184, A04218, A04223, A05140, A05166, A05184, A05201, A05232, A06010, A06038, A07006, A07007, A07173, A08254, A08271, A08278, A09005, A09183, A09219, A09270, A10008, A10252, A10277, A11006, A11021, A11280, A11312, A11326, A12014, A12037, A12045, A12067, A12078, A12094, A12268, A12286, A12417, A12422, A12426, A12434, A12438, B13380, A13437, A13446, A13455, A13464, A14009, A14087, A14113, A14445, A14472, A14529, A15086, A15168, A15509, A15516, A15575, A15609, A16459, A16500, A16577, A17058, A17532, A18089, A18166, A18414, A18427, A18499, A19428, A19429, A20176, A20456, A21062, A21409, A21411, A21415, A21456, A21493, A22029, A22162, A22188, A22391, A22426, A22470, A22508, A23070, A23073, A23074, A23092, A23114, A23404, A23515, A24046, A24048, A24081, A24147, A24155, A24192, A24350, A24389, A24446, A24465, A24485].
Patent publication(s) using this strain [JP2007-112805A, JP2007-290998A, JP2007-084533A, JP2007-037503A, JP2007-289180A, WO2009/116382, JP2010-029130A, JP2010-265234A, WO/2010/122669, JP2011-217734A, JP2011-103879A, WO2012/133827, WO2012/176909, JP2012-67034A, JP2013-233110A, JP2013-169190A, WO/2015/119035, 2015-164416, US20160129035, AU2015215750, 2016-117665, 2017-158434, WO2019/177171, WO2020/066577, WO2022-102753, 2023-128589, 2023-179810].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Carnobacterium divergens
JCM number: 5816 <-- DSM 20623 <-- W. H. Holzapfel 66.
Source: Raw vacuum-packaged minced beef [1869].
Biochemistry/Physiology: [1869,3958].
Cell wall: [1869].
Fatty acid: [3958].
G+C (mol%): 34.8 (Tm) [1869], 35.5 (Tm) [3958].
DNA-DNA relatedness: [3958].
Phylogeny: 16S rRNA gene (LC097075, LC145556, M58816, X54270) [2983].
Genome sequence: JQLO00000000.
More information: Cellular polyamines [6386].
  
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Publication(s) using this strain [A04172, A06038, A06220, A07006, A08246].
Patent publication(s) using this strain [WO2008/102745, JP2013-169190A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides albus
JCM number: 5851 <-- K. Suzuki CNF 141 <-- IMET 7801 <-- H. Prauser Schl3.
Source: Kaolin prepared for the ceramic industry [727].
Biochemistry/Physiology: [727].
Cell wall: Chemotype I [727].
G+C (mol%): 66.5 (Tm) [727].
Phylogeny: 16S rRNA gene (AF004989) [4327].
Other taxonomic data: Phage typing [727]; 16S-23S rRNA ITS of rrn 1 (AF017471), 16S-23S rRNA ITS of rrn 2 (AF017472) [4385]; Rapid identification primers [4387]; Polyamine [4623].
Taxonomy: [727].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides albus
JCM number: 5860 <-- K. Suzuki CNF 153 <-- IMET 7815 <-- H. Prauser 895-14.
Source: Gyttja sediment, valley of the Altmühl River near Badanhausen, Germany.
Biochemistry/Physiology: [727].
Cell wall: Chemotype I [727].
Phylogeny: 16S rRNA gene (AF004999) [4327].
Other taxonomic data: Phage typing [727]; 16S-23S rRNA ITS (AF017482) [4385]; Rapid identification primers [4387]; Polyamine [4623].
Taxonomy: [727].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leuconostoc lactis
JCM number: 6123 <-- ATCC 19256 <-- NCDO 533 <-- E. Garvie <-- T. Gibson (L5).
Source: Milk.
Numerical taxonomy: [3773].
Cell wall: [010].
Fatty acid: [2789].
G+C (mol%): 43.4 [020], 45.0 (Tm) [3773].
DNA-DNA relatedness: [593,2471,3773].
Phylogeny: 16S rRNA (M23035) [3121,3127,3808], 16S rRNA gene (AB596941, LC071838).
DNA typing: Ribotype [4874].
Other taxonomic data: Protein profile [3773].
Genome sequence: BMWM00000000.
More information: Cellular polyamines [6386].
  
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Publication(s) using this strain [A05184, A06038, A06220, A07006, A07012, A09148, A13501, A21357, A24384, A24446].
Patent publication(s) using this strain [2021-193933, WO2022-039249].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium tertium
JCM number: 6289 <-- T. Mitsuoka <-- ATCC 14573 <-- J. D. MacLennan <-- L. McClung <-- R. Spray.
Cell wall: [1385,4322].
G+C (mol%): 24 (Tm) [1375].
Phylogeny: 16S rRNA gene (AB618789, AJ245413, Y18174).
Other taxonomic data: Polyamine [4622].
Genome sequence: BAAACM010000000, JAGGJY000000000.
  
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Publication(s) using this strain [A05187, A06045].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fusobacterium varium
JCM number: 6320 <-- Y. Benno <-- T. Mitsuoka <-- ATCC 8501 <-- A. H. Eggerth.
Phylogeny: 16S rRNA gene (AB640694).
Genome sequence: LR134390.
More information: Polyamine [13792].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD19171.
  
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Publication(s) using this strain [A18166, A22109].
Patent publication(s) using this strain [WO2023-277041].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Eubacterium limosum
JCM number: 6421 <-- T. Mitsuoka <-- ATCC 8486 <-- A. H. Eggerth ("Bacteroides limosum").
Biochemistry/Physiology: [4495].
Cell wall: Murein type B4 [1376].
G+C (mol%): 47.8 (Tm) [1376].
DNA-DNA relatedness: [1376].
Phylogeny: 16S rRNA (M59120) [1376], 16S rRNA gene (AB595134, LC019782).
Other taxonomic data: Polyamine [4622].
Genome sequence: CP019962.
More information: Betaine fermentation [4495]; Isoflavonoides biochanin A [4817].
  
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Publication(s) using this strain [A04184, A06251, A09198, A10101, A10249, A18166, A20446, A20487, A23132, A24048].
Patent publication(s) using this strain [JP2007-112805A, 2022-148943, WO2022-202961, 2023-150100, 2023-152713].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium nitritogenes
JCM number: 6485 <-- T. Mitsuoka <-- ATCC 25547 <-- L. V. Holdeman VPI 0263 <-- A. Prévot TA 20A.
Source: Antarctic soil.
Biochemistry/Physiology: [12221].
Phylogeny: 16S rRNA gene (AB018185, LC480784) [12221].
Other taxonomic data: Polyamine [4622].
Genome sequence: BAAACO010000000.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paraclostridium tenue
JCM number: 6486 <-- T. Mitsuoka <-- ATCC 25553 <-- W. E. C. Moore VPI 4157 <-- A. Prévot 1980.
Source: Post-abortion abscess.
Phylogeny: 16S rRNA (M59118), 16S rRNA gene (FR749984, FR749985, LC011042).
Other taxonomic data: Protein profile [2652]; Polyamine [4622].
Genome sequence: BAAACP00000000.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Peptococcus niger
JCM number: 6506 <-- Y. Benno <-- T. Mitsuoka <-- ATCC 27731 <-- VPI 7953.
Source: Navel swab [8679].
Biochemistry/Physiology: [8679].
G+C (mol%): 50 (Tm) [8679].
Phylogeny: 16S rRNA gene (AB644260).
Genome sequence: FNAF00000000.
More information: Cellular polyamines [6386].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium sp.
JCM number: 7449 <-- H. Oyaizu KS 0403 <-- NCIB 9337 <-- T. Gibson.
Biochemistry/Physiology: [2419].
Fatty acid: i-C15:0, n-C16:1, 3OH-i-C17:0, 3OH-i-C15:0 [2419].
Quinone: MK-6 [2419].
G+C (mol%): 33.6 (Tm) [2419].
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 5 [2419].
More information: The 16S rRNA gene sequence of this strain has 95.9 % similarity to that of the type strain of Flavobacterium johnsoniae (AM230489).
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium sp.
JCM number: 7450 <-- H. Oyaizu KS 0404 <-- NCIB 10150 <-- D. M. Webley C4.
Biochemistry/Physiology: [2419].
Fatty acid: i-C15:0, n-C16:1, 3OH-i-C17:0, 3OH-i-C15:0 [2419].
Quinone: MK-6 [2419].
G+C (mol%): 32.6 (Tm) [2419].
Phylogeny: 5S rRNA [3169], 16S rRNA gene (AM230488).
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 5 [2419].
More information: The 16S rRNA gene sequence of this strain has 96.0 % similarity to that of the type strain of Flavobacterium johnsoniae (AM230489).
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium sp.
JCM number: 7451 <-- H. Oyaizu KS 0405 <-- NCIB 11035 <-- W. M. Fogarty.
Biochemistry/Physiology: [2419].
Fatty acid: i-C15:0, 3OH-i-C15:0, n-C16:0 [2419].
Quinone: MK-6 [2419].
G+C (mol%): 32.4 (Tm) [2419].
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 5 [2419].
More information: The 16S rRNA gene sequence of this strain has 96.7 % similarity to that of the type strain of Flavobacterium johnsoniae (AM230489).
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Myroides odoratus
JCM number: 7458 <-- H. Oyaizu KS 0430 <-- AJ 2518 <-- ATCC 4651 <-- D. H. Bergey <-- M. Stutzer.
Biochemistry/Physiology: [2419,2803].
Fatty acid: i-C15:0, i-C17:1, 3OH-i-C17:0 [2419,4148].
Quinone: MK-6 [2419].
G+C (mol%): 35.1 (Tm) [2803], 35.3 (Tm) [2419].
DNA-DNA relatedness: [4148].
Phylogeny: 16S rRNA gene (AB517709, M58777) [3888], gyrB (AB034239) [5480].
Other taxonomic data: Protein profile [4148]; Polyamine [5054].
Taxonomy: [2803], cluster 6 [2419].
Genome sequence: AHKQ00000000, UGQN00000000.
Publication(s) using this strain [A06017, A06102, B11214].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Myroides odoratus
JCM number: 7459 <-- H. Oyaizu KS 0431 <-- NCTC 11179 <-- J. G. Wallace CL41/66.
Source: Urine.
Biochemistry/Physiology: [2419,2803].
Fatty acid: i-C15:0 [2419,4148].
Quinone: MK-6 [2419].
G+C (mol%): 34.4 (Tm) [2803].
DNA-DNA relatedness: [4148].
Other taxonomic data: Protein profile [4148]; Polyamine [5054].
Taxonomy: [2803], cluster 6 [2419].
Genome sequence: UGQL00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Myroides odoratimimus subsp. odoratimimus
JCM number: 7460 <-- H. Oyaizu KS 0432 <-- NCTC 11180 <-- M. P. Jevons.
Source: Wound swab, UK.
Biochemistry/Physiology: [2419,2803].
Fatty acid: i-C15:0 [2419,4148].
Quinone: MK-6 [2419].
G+C (mol%): 31.9 (Tm) [2803].
DNA-DNA relatedness: [4148].
Phylogeny: 16S rRNA gene (AJ854059), genome BLAST distance phylogeny [12724].
DNA typing: [12724].
Other taxonomic data: Protein profile [4148]; Polyamine [5054].
Taxonomy: [2803], cluster 6 [2419].
Genome sequence: UGQP000000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12103.
Publication(s) using this strain [A06017, A06102, A08024, B11214, B14407, A16522].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingobacterium multivorum
JCM number: 7461 <-- H. Oyaizu KS 0433 <-- AJ 2449 <-- IAM 1014.
Biochemistry/Physiology: [2419].
Fatty acid: 2OH-i-C15:0, n-C16:1, i-C15:0 [2419].
Quinone: MK-7 [2419].
G+C (mol%): 39.4 (Tm) [2419].
Phylogeny: 16S rRNA gene (LC379098).
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 4 [2419].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Flavobacterium sulfureum"
JCM number: 7462 <-- H. Oyaizu KS 0434 <-- AJ 2456 <-- IAM 1252.
Biochemistry/Physiology: [2419].
Fatty acid: i-C15:0, i-C17:1 [2419].
Quinone: MK-6 [2419].
G+C (mol%): 35.0 (Tm) [2419].
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 6 [2419].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingobacterium multivorum
JCM number: 7463 <-- H. Oyaizu KS 0435 <-- AJ 2457 <-- H. Iizuka and K. Komagata Kp-16.
Biochemistry/Physiology: [2419].
Fatty acid: 2OH-i-C15:0, i-C15:0, n-C16:1 [2419].
Quinone: MK-7 [2419].
G+C (mol%): 39.2 (Tm) [2419].
Phylogeny: 16S rRNA gene (LC379099).
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 4 [2419].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloarcula japonica
JCM number: 7785 <-- T. Takashina TR-1.
Source: Saltern soil at Noto Peninsula, Japan [2871].
Morphology: Triangular cell, asymmetric cell division [2870], ultrastructure of cell wall [3256].
Biochemistry/Physiology: [2871].
Polar lipid: [2871].
G+C (mol%): 63.3 (Bd) [2871].
DNA-DNA relatedness: [2871].
Phylogeny: 16S rRNA gene (D28872, EF645684, EF645685, EF645686) [7681,8352], rpoB' (AB477146) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649].
Genome sequence: AOLY00000000 [12471].
Publication(s) using this strain [A04036, B04134, A05202, B07026, A09023, A10175, B11138, A11179, B11215, A12159, B13315, A13557, B15246, A15495, A19033, B20422, A21127, A21131, B24137, A24414].
Patent publication(s) using this strain [2017-163852].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Faecalitalea cylindroides
JCM number: 7786 <-- ATCC 27805 <-- L. Holdeman VPI 3696.
Source: Human feces [3079].
Biochemistry/Physiology: [3079].
G+C (mol%): 26 (Tm) [3079].
Phylogeny: 16S rRNA gene (AB018186, LC011043).
Other taxonomic data: Polyamine [4622].
Taxonomy: [10218].
  
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Publication(s) using this strain [A12312].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Collinsella aerofaciens
JCM number: 7790 <-- ATCC 35085 <-- I. A. Macdonald G 20-7.
Source: Human feces [4448].
Biochemistry/Physiology: [4448]; III-A [4615].
G+C (mol%): 60 (HPLC) [4615].
DNA-DNA relatedness: [4448,4615].
Phylogeny: 16S rRNA gene (AB011814, AB595135) [4615].
Other taxonomic data: Polyamine [4622].
  
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Publication(s) using this strain [A17070, A17155, A20079, A20446, A21209, A22109, A23150, A24131].
Patent publication(s) using this strain [2023-150100, 2023-152713, 2023-161983, 7279983, WO2023-277041].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Collinsella aerofaciens
JCM number: 7791 <-- ATCC 29738 <-- W. E. C. Moore VPI C38-21.
Source: Human feces [4448].
Biochemistry/Physiology: [4448]; I-A [4615].
G+C (mol%): 61 (HPLC) [4615].
DNA-DNA relatedness: [4448,4615].
Phylogeny: 16S rRNA gene (AB011815, LC037211) [4615].
Other taxonomic data: Polyamine [4622].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium acetobutylicum
JCM number: 7828 <-- IAM 19011 <-- S. Sugama <-- ATCC 10132 <-- NRRL B-594 <-- E. McCoy A-14.
DNA-DNA relatedness: [8706].
Phylogeny: 16S rRNA gene (LC071787).
Other taxonomic data: Polyamine [4622].
Production: Acetone and n-butanol.
  
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Patent publication(s) using this strain [JP2009-189320A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium beijerinckii
JCM number: 7829 <-- IAM 19012 <-- S. Sugama <-- ATCC 4259 <-- NCTC 619 <-- A. C. Thaysen ("Bacillus butyricus").
DNA-DNA relatedness: [8706].
Phylogeny: 16S rRNA gene (LC071788).
Other taxonomic data: Polyamine [4622].
Genome sequence: CP002660, CP002661 (plasmid pSMBa), CP002662 (plasmid pSMBb).
Production: Acetone and n-butanol.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paraclostridium bifermentans
JCM number: 7832 <-- IAM 19224 <-- S. Sugama <-- Inst. Pasteur; TM.
Biosafety level 2.
Phylogeny: 16S rRNA gene (AB538434).
Other taxonomic data: Polyamine [4622].
Taxonomy: [11038].
Genome sequence: AVNB00000000.
Publication(s) using this strain [A14457].
Patent publication(s) using this strain [JP2007-252333A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium beijerinckii
JCM number: 7833 <-- IAM 19015 <-- S. Sugama <-- T. Asai and S. Haruta.
Biochemistry/Physiology: [5118].
G+C (mol%): 30.7 (HPLC) [5118].
DNA-DNA relatedness: [5118].
Phylogeny: 16S rRNA gene (AB020187, AB772584) [5118].
Other taxonomic data: Polyamine [4622].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium butyricum
JCM number: 7834 <-- IAM 19001 <-- S. Sugama <-- H. Beerens CH II.
This strain is not exported outside Japan.
Biosafety level 2.
Phylogeny: 16S rRNA gene (LC037212).
Other taxonomic data: Polyamine [4622].
  
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Publication(s) using this strain [A22109].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium sporogenes
JCM number: 7835 <-- IAM 19004 <-- S. Sugama <-- ATU, strain B2.
Biosafety level 2.
Phylogeny: 16S rRNA gene (AB971809).
Other taxonomic data: Polyamine [4622].
More information: Cataloged as Clostridium butyricum until Apr. 2014.
  
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Publication(s) using this strain [A09238].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium sporogenes
JCM number: 7836 <-- IAM 19016 <-- S. Sugama <-- ATU, strain 1.
Biosafety level 2.
Source: Soil.
Phylogeny: 16S rRNA gene (LC037213).
Other taxonomic data: Polyamine [4622].
More information: Cataloged as Clostridium butyricum until Feb. 2015.
Production: Acetone and n-butanol.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium beijerinckii
JCM number: 7837 <-- IAM 19225 <-- S. Sugama <-- Inst. Pasteur; 1320.
Phylogeny: 16S rRNA gene (LC258130).
Other taxonomic data: Polyamine [4622].
More information: Cataloged as Clostridium butyricum until May 2015.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium beijerinckii
JCM number: 7838 <-- IAM 19240 <-- S. Sugama <-- NCIB 6084 <-- Král Collection.
Phylogeny: 16S rRNA gene (LC071789).
Other taxonomic data: Polyamine [4622].
More information: Cataloged as Clostridium butyricum until Jul. 2015.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium beijerinckii
JCM number: 7839 <-- IAM 19092 <-- S. Sugama <-- ATU, strain 426.
Source: Soil.
Biochemistry/Physiology: [5118].
G+C (mol%): 31.8 (HPLC) [5118].
DNA-DNA relatedness: [5118].
Phylogeny: 16S rRNA gene (AB020188) [5118].
Other taxonomic data: Polyamine [4622].
Production: Acetone and n-butanol.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium beijerinckii
JCM number: 7840 <-- IAM 19108 <-- S. Sugama <-- ATU, strain BA-97.
Source: Soil.
Phylogeny: 16S rRNA gene (AB647330).
Other taxonomic data: Polyamine [4622].
More information: Cataloged as "Clostridium butyricum subsp. convexa" until May 2015.
Production: Acetone and n-butanol.
Publication(s) using this strain [A20446].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium sporogenes
JCM number: 7841 <-- IAM 19005 <-- S. Sugama <-- A. R. Prévot.
Biosafety level 2.
Phylogeny: 16S rRNA gene (LC153544).
Other taxonomic data: Polyamine [4622].
More information: Cataloged as "Clostridium butyricum subsp. saccharobutyricum" until May 2016.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium beijerinckii
JCM number: 7847 <-- IAM 19232 <-- S. Sugama <-- Inst. Pasteur; C8.
Biochemistry/Physiology: [5118].
G+C (mol%): 31 (HPLC) [5118].
DNA-DNA relatedness: [5118].
Phylogeny: 16S rRNA gene (AB020191, AB971810) [5118].
Other taxonomic data: Polyamine [4622].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium sporogenes
JCM number: 7849 <-- IAM 19234 <-- S. Sugama <-- Inst. Pasteur; GO1.
Biosafety level 2.
Phylogeny: 16S rRNA gene (AB971811).
Other taxonomic data: Polyamine [4622].
  
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Publication(s) using this strain [A14457].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium sporogenes
JCM number: 7850 <-- IAM 19235 <-- S. Sugama <-- ATU <-- Natl. Canner's Assoc., Washington, NCA 3679.
Biosafety level 2.
Phylogeny: 16S rRNA gene (LC037214).
Other taxonomic data: Polyamine [4622].
  
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Publication(s) using this strain [A09238, A14457].
Patent publication(s) using this strain [2021-136900].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aeromicrobium fastidiosum
JCM number: 8088 <-- NCIMB 12713 <-- M. D. Collins J41.
Source: Herbage [2900].
Biochemistry/Physiology: [2900,3587].
Cell wall: LL-A2pm [2900].
Fatty acid: [3587,4275].
Quinone: MK-9(H4) [3587].
Polar lipid: PE, PG [3587].
G+C (mol%): 71-72 (Tm) [2900].
DNA-DNA relatedness: [2900,3587].
Phylogeny: 16S rRNA gene (AF005022, X53189, X76862, Z78209) [2900,4327,5213], RNase P RNA gene (AF110048) [4865].
Other taxonomic data: Polyamine [4623]; 16S-23S rRNA ITS (AF017509) [4385].
Taxonomy: [3587].
Genome sequence: SDPP00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Treponema socranskii subsp. buccale
JCM number: 8155 <-- ATCC 35534 <-- R. M. Smibert.
Source: Subgingival crevice in a patient with moderate periodontal disease [2914].
Morphology: [2914].
Biochemistry/Physiology: [2914,4618].
Fatty acid: [3521].
G+C (mol%): 48.9 (HPLC) [4618].
DNA-DNA relatedness: [2914,4618].
Phylogeny: 16S rRNA gene (AB910735, AF033305) [4618].
Genome sequence: CP054258.
More information: Polyamine [13792].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Treponema socranskii subsp. socranskii
JCM number: 8157 <-- ATCC 35536 <-- R. M. Smibert et al.
Source: Human oral cavity.
Morphology: [2914].
Biochemistry/Physiology: [2914,4618].
Fatty acid: [3521].
G+C (mol%): 52.0 (Tm) [2914], 49.3 (HPLC) [4618].
DNA-DNA relatedness: [2914,4618].
Phylogeny: 16S rRNA gene (AB971814, AF033306) [4618].
Genome sequence: AUZJ00000000, AVQI00000000.
More information: Polyamine [13792].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12269.
  
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Publication(s) using this strain [A04186].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aeromicrobium erythreum
JCM number: 8359 <-- NRRL B-3381 <-- J. C. French.
Source: Soil, Puerto Rico [2985].
Cell wall: LL-A2pm, Glu, Gly, Ala [2985].
Fatty acid: 10Me-C18:0, n-C18:1, n-C16:0 [2985].
Quinone: MK-9(H4) [3587].
G+C (mol%): 70 (Tm) [2985], 72.1 (genome sequence) [12227].
Phylogeny: 16S rRNA (M37200) [2985], 16S rRNA gene (AF005021) [4385], RNase P RNA gene (AF110047) [4865].
Other taxonomic data: Polyamine [4623]; 16S-23S rRNA ITS (AF017508) [4385].
Taxonomy: [3587].
Genome sequence: CP011502.
More information: β-Lactamase activity [4675].
Production: Erythromycin [2985].
  
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Publication(s) using this strain [A20384, B21235].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrococcus woesei
JCM number: 8421 <-- DSM 3773 <-- W. Zillig Vul4.
Source: Hot sediments in vents of marine solfatatras at the beach of Vulcano Island, Italy [3006].
Morphology: [3006].
Biochemistry/Physiology: [3006].
G+C (mol%): 37.5 (HPLC) [3006].
DNA-DNA relatedness: [3006,3394,3700].
Phylogeny: 5S rRNA (X15329) [3974], 16S rRNA gene (AY519654, HE654000) [5797].
Other taxonomic data: DNA-dependent RNA polymerase [3006]; Polyamine [3632].
More information: Genome analyses [5797].
  
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Publication(s) using this strain [A04193].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrococcus furiosus
JCM number: 8422 <-- DSM 3638 <-- K. O. Stetter and G. Fiala Vc 1.
Source: Hot sediment at the beach of Porto di Levante, Vulcano Island, Italy [3007].
Morphology: [3007].
Biochemistry/Physiology: [3007].
Polar lipid: [4229].
G+C (mol%): 38.3 (Tm), 37.1 (HPLC) [3007].
DNA-DNA relatedness: [3007,3394].
Phylogeny: 16S rRNA gene (AB603518).
Other taxonomic data: Polyamine [3632].
Genome sequence: AE009950 [5319], CP023154.
More information: Preservation [3717].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07704.
  
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Publication(s) using this strain [A04193, A08175, A11327, A13147, A13513, A13523, A13527, A14107, A15176].
Patent publication(s) using this strain [JP2009-060921A].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cytophaga aurantiaca
JCM number: 8511 <-- NCIMB 8628 <-- H. Bortels.
Source: Soil.
Quinone: MK-7 [3903].
G+C (mol%): 42 (Bd) [2911].
Phylogeny: 16S rRNA gene (D12658) [3903].
Other taxonomic data: Polyamine [5054].
Genome sequence: ARBN00000000.
More information: Decomposes cellulose.
Publication(s) using this strain [A07177].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium johnsoniae subsp. johnsoniae
JCM number: 8514 <-- NCIMB 11054 <-- ATCC 17061 <-- C. B. van Niel MYX.1.1.1.
Source: Soil or mud, Rothamsted or Cambridge, UK.
Biochemistry/Physiology: [3060].
Quinone: MK-6 [3903].
Polar lipid: PE [9152].
G+C (mol%): 33 (Bd) [2911].
Phylogeny: 16S rRNA (D12664) [3903], 16S rRNA gene (AM230489), genome BLAST distance phylogeny [12724].
Other taxonomic data: API ZYM [3060]; Polyamine [5054].
Taxonomy: [4343,12724].
Genome sequence: CP000685, FRAO00000000, MUGZ00000000.
More information: Pectinolytic; Degrades reprecipitated chitin.
  
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Publication(s) using this strain [A04168, A04172, A11165, A15068, A15537, A17131].
Patent publication(s) using this strain [JP2013-169190A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aquimarina latercula
JCM number: 8515 <-- NCIMB 1399 <-- R. A. Lewin SIO 1.
Source: Seawater outflow of aquarium, La Jolla, CA, USA.
Biochemistry/Physiology: [3060].
Fatty acid: [6474].
Quinone: MK-6 [3903].
G+C (mol%): 34 (Bd) [2911].
Phylogeny: 16S rRNA gene (D12665) [3903].
Other taxonomic data: API ZYM [3060]; Polyamine [5054].
Taxonomy: [5924,6474].
Genome sequence: AUMK00000000.
More information: Agarolytic.
Publication(s) using this strain [B12163, B13187, B14221, B14263, B16441].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cellulophaga lytica
JCM number: 8516 <-- NCIMB 1423 <-- R. A. Lewin LIM-21.
Source: Mud, Limon, Costa Rica.
Biochemistry/Physiology: [3060].
Quinone: MK-6 [3903].
G+C (mol%): 33 (Bd) [2911].
DNA-DNA relatedness: [5272].
Phylogeny: 16S rRNA (D12666) [3903], 16S rRNA gene (AB517706).
Other taxonomic data: API ZYM [3060]; Polyamine [5054].
Taxonomy: [5272].
Genome sequence: CP002534.
More information: Agarolytic.
Publication(s) using this strain [A12129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium pectinovorum
JCM number: 8518 <-- NCIMB 9059 <-- B. C. J. G. Knight <-- M. J. Dorey 81.
Source: Soil.
Quinone: MK-6 [3903].
G+C (mol%): 34 (Bd) [2911].
Phylogeny: 16S rRNA gene (AB681003, AM230490, D12669) [3903].
Other taxonomic data: Polyamine [5054].
Taxonomy: [4343].
Genome sequence: FRBX00000000, MUHB00000000.
More information: Restricted griding motility; Degrades reprecipitated chitin; Pectolytic.
Publication(s) using this strain [B24505].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium psychrophilum
JCM number: 8519 <-- NCIMB 1947 <-- G. L. Bullock 3068 <-- E. J. Ordal.
Source: Coho salmon (Oncorhynchus kitsuch).
Biochemistry/Physiology: [3060].
Quinone: MK-6 [3903].
G+C (mol%): 32 (Bd) [2911], 32.5 (Tm) [3060].
DNA-DNA relatedness: [3060].
Phylogeny: 16S rRNA (D12670) [3903], 16S rRNA gene (AB078060) [8365].
Other taxonomic data: API ZYM [3060]; Polyamine [5054].
Taxonomy: [4343].
Genome sequence: FMVE000000000.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium saccharophilum
JCM number: 8520 <-- NCIMB 2072 <-- M. O. Moss 024.
Source: The River Wey, Surrey, UK.
Quinone: MK-6 [3903].
G+C (mol%): 32 (Bd) [2911].
Phylogeny: 16S rRNA (D12671) [3903], 16S rRNA gene (AM230491).
Other taxonomic data: Polyamine [5054].
Taxonomy: [4343].
Genome sequence: FRBY00000000.
More information: Agarolytic.
Publication(s) using this strain [B22246].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus celer
JCM number: 8558 <-- DSM 2476 <-- W. Zillig Vu13.
Source: Solfataric marine water hole on a beach of Vulcano, Italy [3143].
Morphology: [3143].
Biochemistry/Physiology: [3143,3802].
Polar lipid: [3174].
G+C (mol%): 56.9 (Tm), 56.3 (HPLC) [3143].
DNA-DNA relatedness: [3006,3143].
Phylogeny: 5S rRNA (M12711) [3972], 16S rRNA (M21529) [3175], 16S rRNA gene (AB603519, AY099174), 23S rRNA (M67497).
Other taxonomic data: DNA-dependent RNA polymerase [3143]; Polyamine [3632]; Sensitivity of ribosome to antibiotics [3699,3764,3933].
Genome sequence: CP014854.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12565.
Publication(s) using this strain [A04193, B05123, B07064, B07136, A07262, A13147, B13278].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus stetteri
JCM number: 8559 <-- DSM 5262 <-- A. Neuner K-3.
Source: Marine solfataric fields of the Kraternaya cove, Northern Kurils [3144].
Morphology: [3144].
Biochemistry/Physiology: [3144].
G+C (mol%): 50.2 (Tm) [3144].
DNA-DNA relatedness: [3144,3394].
Phylogeny: 16S rRNA gene (AY099186).
Other taxonomic data: Polyamine [3632].
Genome sequence: JAGGKB000000000.
  
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Publication(s) using this strain [B04029, A04193, B05123, B07136, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus litoralis
JCM number: 8560 <-- DSM 5473 <-- A. Neuner <-- K. O. Stetter <-- S. Belkin and H. W. Jannasch NS-C.
Source: Shallow submarine hot spring near Lucrino, the Bay of Naples, Italy [3180].
Morphology: [3180].
Biochemistry/Physiology: [3145,3180].
G+C (mol%): 38 [3145], 39.1 (Tm) [3180].
DNA-DNA relatedness: [3145].
Phylogeny: 16S rRNA gene (AB603515, FR749899).
Other taxonomic data: Polyamine [3632].
Genome sequence: AHVB00000000, CP006670 [9050].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12262.
  
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Publication(s) using this strain [A04193, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Metallosphaera hakonensis
JCM number: 8857 <-- S. Takayanagi HO 1-1.
Source: Lava field at Owakudani, Hakone, Japan [4080].
Biochemistry/Physiology: [4080].
Polar lipid: [4080].
G+C (mol%): 38.4 (Bd) [4080], 46.2 (HPLC) [5539].
DNA-DNA relatedness: [4080].
Phylogeny: 16S rRNA gene (D14052) [4080], 16S rRNA gene (D86414) [5539].
Other taxonomic data: Polyamine [4204].
Taxonomy: [5539].
Genome sequence: CP029287 [13094].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12564.
Publication(s) using this strain [A06021, A09212, A13145].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natronomonas pharaonis
JCM number: 8858 <-- IFO 14720 <-- DSM 2160 <-- H. G. Trüper strain Gabara.
Source: Alkaline brines of eutrophic desert lakes of Wadi Natrun, Egypt [3294].
Biochemistry/Physiology: [3293,3294].
Polar lipid: [3293,3627].
G+C (mol%): Major DNA, 61.2: minor DNA, 51.9 (Bd) [3293], 64.3 (Tm) [3294], 62.6 (Tm) [3637,3639].
DNA-DNA relatedness: [3637,3639].
Phylogeny: 16S rRNA gene (D87971) [4247].
Other taxonomic data: Polyamine [3757,3796].
Taxonomy: [3293,4247].
Genome sequence: CR936257 [6170].
More information: Preservation [3716].
  
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Publication(s) using this strain [A08243, A11179, B13057].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natronococcus occultus
JCM number: 8859 <-- NCIMB 2192 <-- W. G. Grant SP4.
Source: Salt pan liquor from the Lake Magadi, Kenya [3293].
Morphology: [3293].
Biochemistry/Physiology: [3293].
Polar lipid: [3293,3627,3629].
G+C (mol%): Major DNA, 64: minor DNA, 55.7 (Bd) [3293].
DNA-DNA relatedness: [3366].
Phylogeny: 16S rRNA gene (Z28378) [3647].
Other taxonomic data: Polyamine [3796]; Sensitivity of ribosome to antibiotics [3699].
Genome sequence: CP003929, CP003930 (plasmid), CP003931 (plasmid).
  
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Publication(s) using this strain [A05182, A10175, A12159].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrialba magadii
JCM number: 8861 <-- NCIMB 2190 <-- W. D. Grant <-- B. J. Tindall MS3.
Source: Lake Magadi, Kenya [3293].
Morphology: [3293,4247].
Biochemistry/Physiology: [3293,3367].
Quinone: MK-8, MK-8(H2) [2070].
Polar lipid: [3293,3623,3627].
G+C (mol%): Major DNA, 63: minor DNA, 49.7 (Bd) [3293].
DNA-DNA relatedness: [3367].
Phylogeny: 5S, 16S and 23S rRNA gene (X72495) [3646,3702].
Other taxonomic data: Polyamine [3757,3796].
Taxonomy: [4247].
Genome sequence: AOHS00000000 [12471], CP001932, CP001933 (plasmid pNMAG01), CP001934 (plasmid pNMAG02), CP001935 (plasmid pNMAG03) [9774].
Publication(s) using this strain [A10175].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Haloarcula sinaiiensis"
JCM number: 8862 <-- M. Kamekura <-- M. Kate <-- W. Stoeckenius <-- B. Javor.
Source: Brine at the Red Sea sabkha [3286].
Morphology: [3286].
Numerical taxonomy: [3282].
Polar lipid: [3282].
G+C (mol%): 59.7 (Tm) [3637,3639].
DNA-DNA relatedness: [3637,3639,3644].
Phylogeny: 16S rRNA gene (D14129, D14130) [3712,8352], rpoB' (AB478421) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649]; Sensitivity of ribosome to antibiotics [3641].
Genome sequence: AOLR00000000.
Publication(s) using this strain [A10175, A12159].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloferax gibbonsii
JCM number: 8863 <-- M. Kamekura <-- ATCC 33959 <-- G. Juez Ma-2.38.
Source: Solar saltern near Alicante, Spain [3281].
Biochemistry/Physiology: [3281].
Numerical taxonomy: [3282].
Polar lipid: [3282].
G+C (mol%): 61.8 (Tm) [3281].
DNA-DNA relatedness: [3644].
Phylogeny: 16S rRNA gene (D13378) [3712,8352], rpoB' (AB477164) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3641]; Sensitivity of ribosome to antibiotics [3641,3699]; Whole-cell protein profile [3865].
Genome sequence: AOLJ00000000 [12471].
Publication(s) using this strain [B07135, B08147, A10175, B20529].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloferax denitrificans
JCM number: 8864 <-- M. Kamekura <-- ATCC 35960 <-- L. I. Hochstein S1.
Source: Saltern in the southern portion of the San Francisco Bay [3289].
Biochemistry/Physiology: [3289].
Quinone: MK-8, MK-8(H2) [3289,3290].
Polar lipid: [3289,3290].
Phylogeny: 16S rRNA gene (D14128) [3712,8352], rpoB' (AB477163) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649].
Taxonomy: [3290].
Genome sequence: AOLP00000000 [12471].
Publication(s) using this strain [B07135, B08147, A10175, A16462, B20529].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum saccharovorum
JCM number: 8865 <-- IFO 14717 <-- DSM 1137 <-- L. I. Hochstein M6.
Source: Saltern in the San Francisco Bay area [3277].
Biochemistry/Physiology: [3276,3277,3278].
Numerical taxonomy: [3282].
Quinone: MK-8, MK-8(H2) [2070,4406].
Polar lipid: [3282,4057].
Serology: [3638].
G+C (mol%): 71.2 (Bd), 64.3 (Tm) [3637,3639].
DNA-DNA relatedness: [3366,3637,3639].
Phylogeny: 16S rRNA (X53570, X53571, X53572) [3932,4057,4058,8352], 16S rRNA gene (U17346, X82167), rpoB' (AB477184) [8352].
Other taxonomic data: dam-Methylation [3754]; Polyamine [3756,3796]; Sensitivity to antibiotics [3649,3965].
Taxonomy: [4058].
Genome sequence: AOJE00000000 [12471].
More information: Preservation [3716].
Publication(s) using this strain [A04036, B06083, A10175, A11179, B11215, A12159, B15257, B15295, A16285, B17194, B17239, A18343].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloferax mediterranei
JCM number: 8866 <-- IFO 14739 <-- ATCC 33500 <-- F. Rodoriguez-Valera R-4.
Source: Salt pond near Alicante, Spain [3830].
Morphology: [3288,3830].
Biochemistry/Physiology: [3288,3830].
Numerical taxonomy: [3282].
Quinone: MK-8 [3630].
Polar lipid: [3282,3624,3630].
Serology: [3638].
G+C (mol%): 60 (UV) [3288], 62.2 (Bd) [3366], 59.1 (Tm) [3637,3639].
DNA-DNA relatedness: [3366,3637,3639,3644].
Phylogeny: 5S rRNA (X14441) [3973], 16S rRNA gene (D11107, S39859, S76923) [3712,3906,3982,8352], rpoB' (AB477167) [8352].
Other taxonomic data: Genome fingerprint [3648]; Polyamine [3756,3796]; Sensitivity to antibiotics [3649,3965]; Sensitivity of ribosome to antibiotics [3641].
Taxonomy: [3282].
Genome sequence: AOLO00000000 [12471], CP001868, CP001869 (plasmid pHM100), CP001870 (plasmid pHM300), CP001871 (plasmid pHM500) [9133], CP039139, CP039140 (plasmid pHME505), CP039141 (plasmid pHME322), CP039142 (plasmid pHME132).
More information: Preservation [3716].
  
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Publication(s) using this strain [A05046, B07135, B08147, A10175, B20529].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halococcus morrhuae
JCM number: 8876 <-- ATCC 17082 <-- C. B. van Niel LD3.1 <-- B. Elazari-Volcani.
Source: Red Sea.
Description: [3291].
Numerical taxonomy: [3635].
Quinone: MK-8, MK-8(H2) [2070].
Polar lipid: [3293].
G+C (mol%): 57.8 [1260], major DNA, 64.6: minor DNA, 53.4 (Bd) [3293,3366].
DNA-DNA relatedness: [3293,3366,3644].
Phylogeny: 5S rRNA (J01865) [3977], 16S rRNA gene (X00662) [3765,8352], 23S rRNA gene (X05481) [3179], rpoB' (AB477157) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649,3965]; Sensitivity of ribosome to antibiotics [3699].
Taxonomy: [3291].
Genome sequence: AOMC00000000 [12471].
More information: Preservation [3716].
  
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Publication(s) using this strain [A05182, B07093, A07283, A09218, A10175, A11179, A12159, B15247, A17087, A18345].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloarcula vallismortis
JCM number: 8877 <-- ATCC 29715 <-- C. Gonzalez J.F.54.
Source: Salt pools of the Death Valley, CA, USA [3283].
Biochemistry/Physiology: [3283].
Numerical taxonomy: [3282].
Polar lipid: [3282].
G+C (mol%): 64.7 (Bd) [3366], 61.0 (Tm) [3637,3639].
DNA-DNA relatedness: [3366,3367,3639].
Phylogeny: 5S rRNA catalog [3645], 16S rRNA gene (D50851, EF645687, EF645688, U17593) [4057,4184,7681,8352], rpoB' (AB477148) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649]; Whole-cell protein profile [3865].
Taxonomy: [3282].
Genome sequence: AOLQ00000000 [12471], FNOF00000000.
More information: Preservation [3716].
Publication(s) using this strain [A05176, A05182, A10175, B11138, A12159, B13315, B17239, A19033].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halococcus saccharolyticus
JCM number: 8878 <-- ATCC 49257 <-- A. Ventosa P-423.
Source: Ponds of saltern in San Fernando, Cáidz, Spain [3292].
Biochemistry/Physiology: [3292].
Numerical taxonomy: [3635].
Polar lipid: [3292,3626,4556].
G+C (mol%): 59.5 (Tm) [3292], 64.0 (Tm) [4556].
DNA-DNA relatedness: [3644,4556].
Phylogeny: 16S rRNA gene (AB004876) [4556,8352], rpoB' (AB477159) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649].
Genome sequence: AOMD00000000 [12471].
Publication(s) using this strain [B07093, A10175, A13150, B15247, A18345].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloferax volcanii
JCM number: 8879 <-- NCIMB 2012 <-- H. Larsen DS2.
Source: Sediment from the Dead Sea [3287].
Biochemistry/Physiology: [3287].
Numerical taxonomy: [3282].
Quinone: MK-8, MK-8(H2) [2070].
Polar lipid: [3282].
Serology: [3638].
G+C (mol%): Major DNA, 66.5: minor DNA 55.3 (Bd) [3293], 63.4 (Tm) [3287], 64.9 (Tm) [3637,3639].
DNA-DNA relatedness: [3366,3637,3644].
Phylogeny: 5S rRNA gene (X02127, X02128) [3978], 5S rRNA (X02129) [3978], 16S rRNA gene (S76922) [3982,8352], 16S rRNA (K00421) [3931], rpoB' (AB477170) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649].
Taxonomy: [3282].
Genome sequence: CP001956, CP001957 (plasmid pHV1), CP001954 (plasmid pHV2), CP001953 (plasmid pHV3), CP001955 (plasmid pHV4) [8435].
More information: Preservation [3716].
  
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Publication(s) using this strain [A05182, B07135, B08147, A10175, B11215, A12159, B20529].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum sodomense
JCM number: 8880 <-- IFO 14740 <-- ATCC 33755 <-- A. Oren RD-26.
Source: Surface water from the Dead Sea [3279].
Biochemistry/Physiology: [3279].
Numerical taxonomy: [3282].
Quinone: MK-8, MK-8(H2) [4406].
Polar lipid: [3282,3628].
G+C (mol%): 68 (Bd) [3279], 67.4 (Bd) [3366], 66.0 (Tm) [3637,3639].
DNA-DNA relatedness: [3366,3637,3639].
Phylogeny: 16S rRNA gene (D13379, X82169) [3712,8352], rpoB' (AB477185) [8352], rhodopsins [8861].
Other taxonomic data: dam-Methylation [3754]; Polyamine [3796]; Sensitivity to antibiotics [3649].
Taxonomy: [4058].
Genome sequence: FOYN00000000.
More information: Preservation [3716].
  
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Publication(s) using this strain [B05125, B08111, B09080, A10175, A11179, A22221].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum lacusprofundi
JCM number: 8891 <-- ATCC 49239 <-- C. A. Mancuso ACAM 34.
Source: Diphasic water-sediment sample from the Deep Lake in Antarctica [3280].
Biochemistry/Physiology: [3280].
Quinone: MK-8, MK-8(H2) [4406].
Polar lipid: [3280,4057].
G+C (mol%): Major DNA, 65.8: minor DNA, 54.8 (Bd) [3280].
Phylogeny: 16S rRNA catalog [3280], 16S rRNA gene (X82170, U17365) [4057,4058,8352], rpoB' (AB477181) [8352].
Other taxonomic data: Polyamine [3796].
Taxonomy: [4058].
Genome sequence: CP001365 (chromosome 1), CP001366 (chromosome 2), CP001367 (plasmid pHLAC01).
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08340.
Publication(s) using this strain [B04087, B06083, B06095, A10175, B15257].
Delivery category: Domestic, A or C; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloarcula hispanica
JCM number: 8911 <-- IAM 13179 <-- F. Rodriguez-Valera Y27.
Source: Solar saltern near Alicante, Spain [3281].
Biochemistry/Physiology: [3281].
Numerical taxonomy: [3282].
Quinone: MK-8 [3630].
Polar lipid: [3282,3630].
G+C (mol%): 62.7 (Tm) [3281], 61.8 (Tm) [3637,3639].
DNA-DNA relatedness: [3637,3639,3644].
Phylogeny: 16S rRNA gene (EF645682, EF645683) [7681,8352], rpoB' (AB477145) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649].
Genome sequence: CP002921 (chromosome I), CP002922 (chromosome II), CP002923 (plasmid pHH400) [8819].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08341.
Publication(s) using this strain [A10175, B11138, B13315, A17087, A17129, A19033, B20422].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Haloarcula californiae"
JCM number: 8912 <-- IAM 13181 <-- U. Rdest strain GN.
Source: Brine from a saltern at Guerrero Negro, Baja, CA, USA [3286].
Biochemistry/Physiology: [3286].
Phylogeny: 16S rRNA gene (AB477984, AB477985) [8352], rpoB' (AB477144) [8352].
Other taxonomic data: Polyamine [3796].
Publication(s) using this strain [A10175, A11179, A12159, A19033].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sulfolobus acidocaldarius
JCM number: 8929 <-- DSM 639 <-- T. D. Brock 98-3.
Source: Locomotive Spring in Yellowstone National Park, WY, USA [3318].
Morphology: [3318,3319].
Biochemistry/Physiology: [3318,3679,3792].
Quinone: Caldariellaquinone [3691].
Polar lipid: [3680,3792,3950,4229].
G+C (mol%): 41 (Bd), 37 (Tm), 39 (HPLC) [3319], 39.9 (Bd) [3660].
DNA-DNA relatedness: [3320,3322,3323,3496,3497,3660,3698,3700].
Phylogeny: 5S rRNA [3697], 5S rRNA gene (U05019) [3666], 16S rRNA gene (D14876, D14053) [3755,4080], 23S rRNA gene (U32320) [4111], EF-1α gene (X52382) [3981], EF-2 gene [3869].
Other taxonomic data: DNA-dependent RNA polymerase [3319,3696,3811,3812]; Polyamine [3632,3756]; S-layer component profile [3679]; Whole-cell protein profile [3792].
Genome sequence: CP000077 [6051].
More information: Identity of the strain [3678]; Preservation [3716]; S-layer [3758].
  
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Publication(s) using this strain [A04042, A04046, A04221, A06021, A19512, A21402, B22309, A22498, A22527, B24073].
Patent publication(s) using this strain [WO2023-195544].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saccharolobus solfataricus
JCM number: 8930 <-- DSM 1616 <-- W. Zillig P1.
Source: Volcanic hot spring at Pisciarelli Solfatara, Italy [3319].
Morphology: [3319].
Biochemistry/Physiology: [3319,3679,12033].
Quinone: Caldariellaquinone [3691].
G+C (mol%): 40 (Bd), 36 (Tm), 34 (HPLC) [3319], 33.7 (Tm), 36.1 (HPLC) [3320], 34.0 (Tm), 33.7 (HPLC) [3496].
DNA-DNA relatedness: [3320,3322,3323,3496,3497].
Phylogeny: 16S rRNA gene (D26490, X90478) [3793,4110], 23S rRNA gene (U32322) [4111].
Other taxonomic data: 7S RNA gene (X17239) [3979]; DNA-dependent RNA polymerase [3319]; Genome size [4330]; Polyamine [3632]; Sensitivity to antibiotics [3699,3764]; S-layer component profile [3679].
Taxonomy: [12032,12033].
Genome sequence: LT549890.
More information: Identity of the strain [3678]; Preservation [3716]; S-layer [3758].
Publication(s) using this strain [A22498, B24073, A24340, A24361].
Patent publication(s) using this strain [WO2023-195544].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saccharolobus shibatae
JCM number: 8931 <-- DSM 5389 <-- D. W. Grogan <-- W. Zillig strain B12.
Source: Geothermal pools and bubbling 'mud pots' in Beppu, Kyushu, Japan [3320].
Biochemistry/Physiology: [3320,3679,12033].
G+C (mol%): 34.0 (Tm), 35.2 (HPLC) [3320].
DNA-DNA relatedness: [3320,3698,3700].
Phylogeny: 5S rRNA gene (X05870) [3976], 16S rRNA gene (M32504) [3320], 23S rRNA gene (U32321) [4111].
Other taxonomic data: Genome size [4330]; Polyamine [3632]; S-layer component profile [3679].
Taxonomy: [12032,12033].
Genome sequence: CP077717, CP077716.
  
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Publication(s) using this strain [A05037, A06021, A09212].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acidianus brierleyi
JCM number: 8954 <-- DSM 1651 <-- W. Zillig and K. O. Stetter <-- C. L. Brierley and J. A. Brierley.
Source: Thermal spring drainage in the Yellowstone National Park, WY, USA.
Biochemistry/Physiology: [3891].
Quinone: Caldariellaquinone [3691].
Polar lipid: [3792].
G+C (mol%): 37 (Bd), 31 (Tm), 32 (HPLC) [3319], 30.5 (Tm), 30.0 (HPLC) [3496].
DNA-DNA relatedness: [3322,3323,3496,3497,3700].
Phylogeny: 16S rRNA gene (D26490, X90477) [3793,4110].
Other taxonomic data: DNA-dependent RNA polymerase [3319]; Genome size [4330]; Polyamine [3632]; Whole-cell protein profile [3792]; Sensitivity of ribosome to antibiotics [3701].
Taxonomy: [3322].
Genome sequence: CP029289 [13094].
More information: S-layer [3758].
Publication(s) using this strain [A04046, A09212, A11039, A13106, B22309].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acidianus infernus
JCM number: 8955 <-- DSM 3191 <-- K. O. Stetter So4a.
Source: Solfatara Crater, Naples, Italy [3322].
Biochemistry/Physiology: [3322,3664].
G+C (mol%): 31 (Tm) [3322,3664], 30.5 (Tm), 33.0 (HPLC) [3496], 31 (Tm), 33.0 (HPLC) [3497].
DNA-DNA relatedness: [3322,3323,3496,3497,3664].
Phylogeny: 16S rRNA gene (D38773, X89852) [3792,4110], 23S rRNA gene (U32318) [4111].
Other taxonomic data: Genome size [4330]; Polyamine [3632]; Whole-cell protein profile [3664]; Sensitivity of ribosome to antibiotics [3701].
Genome sequence: WFIY00000000 [13095].
Publication(s) using this strain [A04046, A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloarcula marismortui
JCM number: 8966 <-- ATCC 43049 <-- L. Hochstein <-- B. J. Tindall <-- M. Ginzburg.
Source: Water from the Dead Sea [3365].
Phylogeny: 16S rRNA gene (AB355987, EF645692, EF645693) [4857,7681,8352], rpoB' [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity to antibiotics [3649].
Taxonomy: [3284].
Genome sequence: AY596297 (chromosome I), AY596298 (chromosome II), AY596290 (plasmid pNG100), AY596291 (plasmid pNG200), AY596292 (plasmid pNG300), AY596293 (plasmid pNG400), AY596294 (plasmid pNG500), AY596295 (plasmid pNG600), AY596296 (plasmid pNG700) [5811], CP039138, CP039132 (plasmid pHMA34), CP039133 (plasmid pHMA33), CP039134 (plasmid pHMA155), CP039135 (plasmid pHMA133), CP039136 (plasmid pHMA288), CP039137 (plasmid pHMA411).
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08120.
Publication(s) using this strain [A04036, B11138, B13315].
Patent publication(s) using this strain [JP2011-200153A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium salinarum
JCM number: 8978 <-- NCIMB 764 <-- N. E. Gibbons <-- A. G. Lochhead.
Source: Salted cowhide [3274].
Numerical taxonomy: [3274].
Quinone: MK-8, MK-8(H2) [2070].
G+C (mol%): 66.4 (Tm) [3637,3639].
DNA-DNA relatedness: [3366,3637,3639].
Phylogeny: 16S rRNA gene (AJ496185) [5863,8352], rpoB' (AB477150) [8352].
Other taxonomic data: Fructose biphosphate aldolases [3642]; Polyamine [3796]; Sensitivity to antibiotics [3649]; Whole-cell protein profile [3865].
Taxonomy: [3275,4079].
Genome sequence: CP038631, CP038632 (plasmid pHSAL1), CP038633 (plasmid pHSAL2), VRYN00000000.
  
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Publication(s) using this strain [B08081, B10127, A10175, B11215, A12159, A12175, A12381, B17239].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halococcus sp.
JCM number: 8979 <-- NCIMB 767 <-- N. E. Gibbons <-- LMD 33.42.
Polar lipid: [4556].
Phylogeny: 16S rRNA gene (D63786) [4247].
Other taxonomic data: Polyamine [3796].
More information: Identity of the strain [3858].
Publication(s) using this strain [A04036].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrinema pallidum
JCM number: 8980 <-- NCIMB 777 <-- C. W. F. McClare <-- D. J. Kushner.
Source: Salted cod.
Biochemistry/Physiology: [4510].
Quinone: MK-8, MK-8(H2) [2070].
DNA-DNA relatedness: [3366].
Phylogeny: 16S rRNA gene (AJ002949) [4510], 16S rRNA gene (AB477230) [8352].
Other taxonomic data: Polyamine [3796]; Sensitivity of ribosome to antibiotics [3641,3699]; Whole-cell protein profile [4510].
Genome sequence: AOII00000000 [12471].
More information: Identity of the strain [3857].
Publication(s) using this strain [A04036, B05073, B08092, A10079, A10175, A12449, A16463, A17087].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium salinarum
JCM number: 8981 <-- NCIMB 2259 <-- B. J. Tindall <-- DSM 669 <-- D. Keradjopoulos <-- NRC <-- A. G. Lochhead.
Source: Salted buffalo hide [3274].
Numerical taxonomy: [3275].
Polar lipid: [3282,3625].
Serology: [3638].
G+C (mol%): 67.9 (Tm) [3637,3639].
DNA-DNA relatedness: [3637,3639].
Phylogeny: 5S rRNA (M10691) [3980].
Other taxonomic data: Fructose biphosphate aldolases [3642]; Polyamine [3756,3757,3796].
Taxonomy: [3275].
Genome sequence: JACHGX000000000.
More information: Preservation [3716].
Publication(s) using this strain [A07154, A09158].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Stygiolobus azoricus
JCM number: 9021 <-- DSM 6296 <-- A. Segerer and K. O. Stetter FC6.
Source: Furnas Caldeiras, São Miguel Island, Azores [3323].
Biochemistry/Physiology: [3323].
G+C (mol%): 38 (Tm) [3323].
DNA-DNA relatedness: [3323].
Phylogeny: 16S rRNA gene (X90480) [4110], 23S rRNA gene (U32319) [4111].
Other taxonomic data: Genome size [4330]; Polyamine [3797].
Genome sequence: CP045483 [13095].
Publication(s) using this strain [A06021, A09212, A13145, B22308].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum vacuolatum
JCM number: 9060 <-- W. D. Grant M24.
Source: Brine from the Lake Magadi, Kenya [3367].
Biochemistry/Physiology: [3367].
Quinone: MK-8 [3367].
Polar lipid: [3367].
G+C (mol%): 62.7 (Tm) [3367].
DNA-DNA relatedness: [3367].
Phylogeny: 16S rRNA gene (D87972) [4247].
Other taxonomic data: Polyamine [3796].
Taxonomy: [4247].
Genome sequence: FZNQ00000000.
  
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Publication(s) using this strain [B04087, B05078, A10175, A11179, B15295].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermoplasma acidophilum
JCM number: 9062 <-- IFO 15155 <-- T. Itoh <-- ATCC 25905 <-- R. G. Wittler <-- T. D. Brock <-- G. Darland 122-1B2.
Source: Coal refuse pile [3373].
Biochemistry/Physiology: [3373,3650,3661].
Quinone: MK-7 [3689], MMK-7 [3690], MK-7, MMK-7 [3691].
G+C (mol%): 46 (Tm), 45 (HPLC) [3650], 45.0 (Bd) [3660], 46.9 (Bd) [3674], 46.8 (TLC) [3675].
DNA-DNA relatedness: [3650,3660,3698,3700].
Phylogeny: 5S, 16S and 23S rRNA genes [3907], 5S rRNA gene (M32297, X02709) [3975], 16S rRNA gene (M38637) [3905], 23S rRNA gene (M32298) [3687], EF-1α gene (X53866) [3867], EF-2 gene (X56840) [3868].
Other taxonomic data: DNA-dependent RNA polymerase [3811]; Polyamine [3632,5609]; Sensitivity of ribosome to antibiotics [3699,3764].
Taxonomy: [3650].
Genome sequence: AL139299 [4949].
More information: Fermenter cultivation [3866]; Preservation [3716].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07523.
  
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Publication(s) using this strain [A06199, A12082, A13114, A14433, A17135, B22309].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Metallosphaera sedula
JCM number: 9064 <-- IFO 15160 <-- T. Itoh TA-2.
Source: Acidic hot mud, Hakone, Japan [3792,5029].
Biochemistry/Physiology: [3792,5029].
Polar lipid: [3792,5029].
G+C (mol%): 47.1 (HPLC) [3792,5029].
DNA-DNA relatedness: [5029].
Phylogeny: 16S rRNA gene (D38776) [3792], 16S rRNA gene (D85508) [5029].
Other taxonomic data: Whole-cell protein profile [3792]; Polyamine [5609].
  
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Publication(s) using this strain [A04060].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sulfurisphaera ohwakuensis
JCM number: 9065 <-- IFO 15161 <-- T. Itoh TA-1.
Source: Acidic hot mud, Hakone, Japan [3792,4325].
Biochemistry/Physiology: [3792,4325].
Polar lipid: [3792,4325].
G+C (mol%): 32.9 (HPLC) [3792,4325].
Phylogeny: 16S rRNA gene (D38775, 85507) [3792,4325].
Other taxonomic data: Polyamine [4613]; Whole-cell protein profile [3792].
Genome sequence: CP045484 [13095].
More information: Preservation [3716].
Publication(s) using this strain [A06021, A08175, A09212].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum distributum
JCM number: 9100 <-- VKM B-1733 <-- I. S. Zvyagintseva 1m.
Source: Salt soil crust, Turkmenistan [3395].
Morphology: [3643].
Biochemistry/Physiology: [3395].
Polar lipid: [4057,4165].
G+C (mol%): 63.9 (Tm) [5655].
DNA-DNA relatedness: [4165,5655].
Phylogeny: 5S rRNA (L27343) [4165], 16S rRNA gene (D63572, L26170) [4057,4165,8352], rpoB' (AB477180) [8352].
Other taxonomic data: Polyamine [4558]; Multilocus sequence analysis (atpB, EF-2, ginA, ppsA and rpoB') [12920]; Phylogenomic analysis on 1347 core translated gene sequences [12920]; Average nucleotide identity, genome-to-genome distances [12920].
Taxonomy: [4057,4151,4185,12920].
Genome sequence: AOJM00000000 [12471].
Publication(s) using this strain [A04036, A06078, B07094, B07113, A10175, A11179, A14504, A20263].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloterrigena turkmenica
JCM number: 9101 <-- VKM B-1734 <-- I. S. Zvyagintseva 4k.
Source: Salt soil crust, Ashgabat, Turkmenistan [3395].
Morphology: [3643].
Biochemistry/Physiology: [3395].
Polar lipid: [4556].
G+C (mol%): 59.8 (Tm) [4556], 64.26 (genome sequence) [12473].
DNA-DNA relatedness: [4556,4742].
Phylogeny: 16S rRNA gene (AB004878) [4556].
Other taxonomic data: Polyamine [4558].
Taxonomy: [4556].
Genome sequence: CP001860, CP001861 (plasmid pHTUR01), CP001862 (plasmid pHTUR02), CP001863 (plasmid pHTUR03), CP001864 (plasmid pHTUR04), CP001865 (plasmid pHTUR05), CP001866 (plasmid pHTUR06) [12473].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08342.
  
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Publication(s) using this strain [B05125, B07134, B10129, A10175, A12159].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium salinarum
JCM number: 9118 <-- CCM 2148 <-- I. Dundas 1.
Source: Salted codfish.
Numerical taxonomy: [3282].
Quinone: MK-8, MK-8(H2) [2070].
DNA-DNA relatedness: [3366].
Other taxonomic data: Polyamine [4558]; Sensitivity to antibiotics [3649]; Sensitivity of ribosome to antibiotics [3641,3699].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium salinarum
JCM number: 9119 <-- CCM 2088 <-- I. Dundas <-- N. E. Gibbons CCNRLO 9.
G+C (mol%): Major DNA, 66: minor DNA, 57 (Bd) [3636].
DNA-DNA relatedness: [3366].
Other taxonomic data: Polyamine [4558].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium salinarum
JCM number: 9120 <-- CCM 2090 <-- I. Dundas Delft.
Numerical taxonomy: [3282].
Quinone: MK-8, MK-8(H2) [2070].
Polar lipid: [3282,3293].
G+C (mol%): Major DNA, 70.9: minor DNA 59.2 (Bd) [3293], major DNA, 67: minor DNA, 59 (Bd) [3636].
DNA-DNA relatedness: [3366].
Other taxonomic data: Polyamine [4558].
More information: Sensitivity to antitumor drugs [3892]; Incorporation of luecine into the isoprenoidal lipid [8044].
  
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Publication(s) using this strain [A04036, A10087, A11179].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium salinarum
JCM number: 9121 <-- CCM 2084 <-- I. Dundas <-- N. E. Gibbons CCNRLO 10.
DNA-DNA relatedness: [3366].
Other taxonomic data: Polyamine [4558].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Carnobacterium divergens
JCM number: 9133 <-- B. G. Shaw (Lactobacillus divergens MR358) 66.
Source: Raw vacuum-packaged minced beef [1869].
Biochemistry/Physiology: [1869,3958].
Cell wall: [1869].
Fatty acid: [3958].
G+C (mol%): 34.8 (Tm) [1869], 35.5 (Tm) [3958].
DNA-DNA relatedness: [3958].
Phylogeny: 16S rRNA gene (LC097075, LC145556, M58816, X54270) [2983].
Genome sequence: JQLO00000000.
More information: Cellular polyamines [6386].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sulfuracidifex metallicus
JCM number: 9184 <-- DSM 6482 <-- K. O. Stetter and G. Huber Kra23.
Source: Solfatara in Krafla, Iceland [3497,13139].
Morphology: [3497].
Biochemistry/Physiology: [3497.13139].
Quinone: Caldariellaquinone [3497,3683].
Polar lipid: [3683].
G+C (mol%): 38 (Tm), 37 (HPLC) [3497].
DNA-DNA relatedness: [3497,12916].
Phylogeny: 16S rRNA gene (X90479) [4110].
Other taxonomic data: DNA-dependent RNA polymerase [3497]; Genome size [4330]; Polyamine [3632]; Whole-cell protein profile [13139].
Taxonomy: [12916].
Genome sequence: CP135238, BBBY00000000, WGGD00000000.
More information: Ore leaching capacity [3497]; Iron oxidation [12916].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12586.
Publication(s) using this strain [A04046, A06021, A09212, B20268].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Metallosphaera sedula
JCM number: 9185 <-- DSM 5348 <-- K. O. Stetter and G. Huber TH2.
Source: Hot water pond at Pisciarelli Solfatara, near Naples, Italy [3496,13139].
Morphology: [3496].
Biochemistry/Physiology: [3496,3800,13139].
Quinone: Caldariellaquinone [3496,3683].
Polar lipid: [3683,3792].
G+C (mol%): 44.6 (Tm), 46.7 (HPLC) [3496], 45 (Tm), 47 (HPLC) [3497].
DNA-DNA relatedness: [3496,3497].
Phylogeny: 16S rRNA gene (D26490, X90481) [3793,4110].
Other taxonomic data: DNA-dependent RNA polymerase [3496]; Genome size [4330]; Polyamine [3632]; Sensitivity of ribosome to antibiotics [3701]; Whole-cell protein profile [3792,13139].
Genome sequence: CP000682 [10480].
More information: Ore leaching capacity [3496].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD13702.
Publication(s) using this strain [A06021, A09212, B22309].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Desulfurococcus mucosus
JCM number: 9186 <-- DSM 2161 <-- W. Zillig Hvv 3/9.
Source: Acidic hot spring in Hveravellir, Iceland [3492].
Morphology: [3492].
Biochemistry/Physiology: [3492].
Polar lipid: [3682].
G+C (mol%): 50.8 (Tm) [3492].
DNA-DNA relatedness: [11006].
Phylogeny: EF-1α gene (X73582) [3804], EF-2 gene (X68014) [3704,3804].
Other taxonomic data: DNA-dependent RNA polymerase [3811]; Polyamine [4098]; Sensitivity of ribosome to antibiotics [3699,3764,3933].
Taxonomy: [11006].
Genome sequence: AUQX00000000 [12891].
More information: Type strain of Desulfurococcus mobilis [1870,3492].
Publication(s) using this strain [A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Desulfurococcus mucosus
JCM number: 9187 <-- DSM 2162 <-- W. Zillig O7/1.
Source: Acidic hot spring in Askja, Iceland [3492].
Morphology: [3492].
Biochemistry/Physiology: [3492].
G+C (mol%): 51.3 (Tm), 52.9 (HPLC) [3492].
DNA-DNA relatedness: [3698,11006].
Phylogeny: 16S rRNA gene (NR_102882).
Other taxonomic data: DNA-dependent RNA polymerase [3492,3811]; Polyamine [4098].
Genome sequence: CP002363 [8753].
Publication(s) using this strain [A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Desulfurococcus amylolyticus
JCM number: 9188 <-- DSM 3822 <-- E. A. Bonch-Osmolovskaya Z-533.
Source: Thermal spring of Kamchatka and Kunashir Island [3493].
Morphology: [3493].
Biochemistry/Physiology: [3493,3803,3864].
G+C (mol%): 41 (Tm), 43.2 (HPLC) [3493].
DNA-DNA relatedness: [11006].
Phylogeny: 16S rRNA gene (AB661712, AF250331) [4805].
Other taxonomic data: Polyamine [4098].
Genome sequence: AZUU00000000.
Publication(s) using this strain [A09212, A13538, A18120].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrobaculum islandicum
JCM number: 9189 <-- DSM 4184 <-- K. O. Stetter and G. Huber GEO3.
Source: Hot water from the Krafla geothermal power plant, Iceland [3494].
Morphology: [3494].
Biochemistry/Physiology: [3494,3703].
Quinone: MK-6(H12) [4405].
Polar lipid: [3683].
G+C (mol%): 45 (Tm), 47 (HPLC) [3494].
DNA-DNA relatedness: [3494].
Phylogeny: 16S rRNA gene (L07511) [3722].
Other taxonomic data: Polyamine [4098].
Genome sequence: CP000504.
  
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Publication(s) using this strain [A08164, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrobaculum organotrophum
JCM number: 9190 <-- DSM 4185 <-- K. O. Stetter and G. Huber H10.
Source: Gassed spring hole in Grandalur, Iceland [3494].
Morphology: [3494].
Biochemistry/Physiology: [3494].
Quinone: MK-6(H12), fully saturated cyclic menaquinone [3693].
Polar lipid: [3683].
G+C (mol%): 46 (Tm), 48 (HPLC) [3494].
DNA-DNA relatedness: [3494].
Phylogeny: 16S rRNA gene (AB063647) [5264].
Other taxonomic data: Polyamine [4098].
  
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Publication(s) using this strain [A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acidianus ambivalens
JCM number: 9191 <-- DSM 3772 <-- W. Zillig Lei 10.
Source: Solfataric waterhole at Leirhukur fissure, Iceland [3495,3665].
Biochemistry/Physiology: [3495].
Polar lipid: [3792].
G+C (mol%): 32.7 [3495].
DNA-DNA relatedness: [3323].
Phylogeny: 16S rRNA gene (D38774, X90484) [3792,4110].
Other taxonomic data: DNA-dependent RNA polymerase [3495]; Genome size [4330]; Polyamine [3797]; Whole-cell protein profile [3792].
Taxonomy: [4110].
Genome sequence: WHYS00000000; CP045482 [13095].
Publication(s) using this strain [A04046, A07059, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum coriense
JCM number: 9275 <-- S. D. Nuttall CH2.
Source: Marine solar saltern in Geelong, Australia [3514].
Biochemistry/Physiology: [3514].
Polar lipid: [4057].
Phylogeny: 16S rRNA gene (L00922) [3514,3579,8352], rpoB' (AB477179) [8352].
Other taxonomic data: dam-Methylation [3514]; Polyamine [4558].
Taxonomy: [4057,4151].
Genome sequence: AOJL00000000 [12471].
Publication(s) using this strain [A04036, B04134, A04209, B07094, B07113, B09080, A10175, A11179, A22221].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloferax lucentense
JCM number: 9276 <-- S. D. Nuttal <-- M. Torreblanca Aa 2.2.
Source: Saltern in Alicante, Spain.
Biochemistry/Physiology: [5356].
Numerical taxonomy: [3282].
Polar lipid: [5356].
G+C (mol%): 64.5 (Tm) [5356].
DNA-DNA relatedness: [5356].
Phylogeny: 16S rRNA gene (AB081732, AH003665) [3515,5356,8352], rpoB' (AB477165) [8352].
Other taxonomic data: Polyamine [4558].
Taxonomy: [5356].
Genome sequence: AOLH00000000 [12471].
More information: Plasmid vector [3515].
Publication(s) using this strain [B04134, A06250, B07135, B08147, A10175, A16462].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermoproteus tenax
JCM number: 9277 <-- DSM 2078 <-- W. Zillig Kra1.
Source: Acidic solfataric hot spring, Krafla, Iceland [3321].
Morphology: [3321].
Biochemistry/Physiology: [3321,3499,3703].
Quinone: MK-6(H12), MK-5(H10), MK-4(H8), MK-6(H10), MK-5(H8), MK-4(H6), MMK-6(H12), MMK-5(H10) [3692].
Polar lipid: [3321,3681].
G+C (mol%): 55.9 (Tm), 55.3 (HPLC) [3321].
DNA-DNA relatedness: [3698].
Phylogeny: 16S rRNA catalog [3686].
Other taxonomic data: DNA-dependent RNA polymerase [3321,3811]; Polyamine [3756,4098]; Sensitivity of ribosome to antibiotics [3764,3933].
Genome sequence: FN869859 [9268].
More information: S-layer [3758].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08500.
  
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Publication(s) using this strain [A04060, A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrobaculum neutrophilum
JCM number: 9278 <-- DSM 2338 <-- K. O. Stetter V24Sta.
Source: Hot spring in Kerlingarjoll, Iceland [3499].
Biochemistry/Physiology: [3499,3676].
Phylogeny: 16S rRNA gene (AB009618) [4408].
Other taxonomic data: Polyamine [4098].
Taxonomy: [9364].
Genome sequence: CP001014.
More information: Intron [4408].
Publication(s) using this strain [A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanosarcina mazei
JCM number: 9314 <-- S. Asakawa TMA.
Source: Paddy field soil in Chikugo, Fukuoka, Japan [3798].
Biochemistry/Physiology: [3798].
Polar lipid: [3798].
G+C (mol%): 42.1 (HPLC) [3798].
DNA-DNA relatedness: [3798].
Other taxonomic data: Polyamine [5431].
Genome sequence: AP019780.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12566.
  
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Publication(s) using this strain [A06001, A07262, A22541].
Patent publication(s) using this strain [WO2009/038195].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanobrevibacter arboriphilus
JCM number: 9316 <-- H. Morii and Y. Koga A2.
Source: Anaerobic sewage digester in Kitakyusyu, Japan [3517].
Biochemistry/Physiology: [3517].
Polar lipid: [3889,3890].
Serology: [3517].
G+C (mol%): 29.6 (Tm) [3517], 25.9 (HPLC) [3729].
DNA-DNA relatedness: [3729].
Other taxonomic data: Polyamine [5431].
Publication(s) using this strain [A07262, A23158].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus profundus
JCM number: 9378 <-- T. Kobayashi DT5432.
Source: Hydrothermal vent at the Mid-Okinawa Trough [3633].
Morphology: [3633].
Biochemistry/Physiology: [3633].
G+C (mol%): 52.5 (HPLC) [3633].
Phylogeny: 16S rRNA gene (AY099184), 16S rRNA gene & ITS & 23S rRNA gene (Z75233) [3633].
Other taxonomic data: Polyamine [4098].
Genome sequence: CP014862, CP014863 (plasmid).
Production: Extracellular amylase [3728].
Publication(s) using this strain [B04029, A04053, A04193, B05123, B07136].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microlunatus phosphovorus
JCM number: 9379 <-- K. Nakamura NM-1.
Source: Activated sludge grown on diluted corn steep liquor, Japan [3847].
Biochemistry/Physiology: [3831].
Cell wall: LL-A2pm [3831].
Fatty acid: a-C15:0, i-C15:0, i-C16:0 [3831].
Quinone: MK-9(H4) [3831].
G+C (mol%): 67.9 (HPLC) [3831].
Phylogeny: 16S rRNA gene (D26169, Z78207) [3831,5213], RNase P RNA gene (AF110053) [4865].
Other taxonomic data: Polyamine [4623].
Genome sequence: AP012204.
More information: Accumulates polyphosphate [3831,3847].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08349.
Publication(s) using this strain [A04007, A06039].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrodictium brockii
JCM number: 9392 <-- DSM 2708 <-- K. O. Stetter S1.
Source: Submarine solfataric field off Vulcano, Italy [3563].
Biochemistry/Physiology: [3563].
Serology: [3563].
G+C (mol%): 51.5 (Tm), 51.6 (HPLC) [3563], 62 [3564].
Phylogeny: 16S rRNA gene (KC139250).
Other taxonomic data: Cell envelope [3563]; Polyamine [4098].
Taxonomy: [3564].
  
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Publication(s) using this strain [A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrodictium occultum
JCM number: 9393 <-- DSM 2709 <-- K. O. Stetter PL-19.
Source: Submarine solfataric field off Vulcano, Italy [3563].
Morphology: [3563,3663].
Biochemistry/Physiology: [3499,3563,3663].
Serology: [3563].
G+C (mol%): 61.3 (Tm), 62.2 (HPLC) [3563].
DNA-DNA relatedness: [3564].
Phylogeny: 5S rRNA gene (M21086) [3768], 16S rRNA gene (M21087) [3768].
Other taxonomic data: 7S RNA gene (M21085) [3768]; Polyamine [3756,4098].
Taxonomy: [3564].
Genome sequence: LNTB00000000 [12444].
  
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Publication(s) using this strain [A06021, A09212, A13145].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrodictium abyssi
JCM number: 9394 <-- DSM 6158 <-- K. O. Stetter AV2.
Source: Abyssal active 'black smoker' off Guaymas, Mexico [3564].
Morphology: [3564].
Biochemistry/Physiology: [3564].
Polar lipid: [3564].
G+C (mol%): 59.3 (Tm), 59.0 (HPLC) [3564].
DNA-DNA relatedness: [3564].
Phylogeny: 16S rRNA gene (KC139249, X99559) [4246].
Other taxonomic data: Genome size [4330]; Polyamine [4098].
Genome sequence: AP028907.
  
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Publication(s) using this strain [A09212, B23122, B24073].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hyperthermus butylicus
JCM number: 9403 <-- DSM 5456 <-- W. Zillig PLM1-5.
Source: Solfataric sea floor on the beach of the São Miguel Island, Azores [3576].
Morphology: [3576,3577].
Biochemistry/Physiology: [3576,3577].
G+C (mol%): 55.6 [3576,3577].
DNA-DNA relatedness: [3576].
Phylogeny: 16S rRNA gene (X99553) [4246].
Genome sequence: CP000493 [6866].
More information: DNA-dependent RNA polymerase [3576]; Polyamine [4098].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD13701.
  
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Publication(s) using this strain [A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Staphylothermus marinus
JCM number: 9404 <-- DSM 3639 <-- K. O. Stetter and G. Fiala F1.
Source: Geothermally heated sea floor at Vulcano, Italy [3575].
Morphology: [3575].
Biochemistry/Physiology: [3575].
G+C (mol%): 34.9 (Tm), 35.3 (HPLC) [3575].
DNA-DNA relatedness: [3575].
Phylogeny: 16S rRNA gene (X99560) [4246].
Other taxonomic data: Polyamine [4098].
Genome sequence: CP000575 [8329].
  
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Publication(s) using this strain [A06021, A09212, A13145].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium salinarum
JCM number: 9409 <-- NCIMB 2080 <-- ATCC 29341 <-- L. I. Hochstein R-1 <-- L. Briggs.
Quinone: MK-8, MK-8(H2) [2070].
DNA-DNA relatedness: [3644,3698].
Phylogeny: 5S rRNA gene [3767], 16S rRNA gene (M11583) [3767,3904], 23S rRNA gene [3767].
Other taxonomic data: DNA-dependent RNA polymerase [3696,3812]; Polyamine [4558].
Genome sequence: AM774415 [8432].
More information: Mutant of NRL strain of Halobacterium halobium [3640].
Publication(s) using this strain [A12175].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Luteococcus japonicus
JCM number: 9415 <-- IFO 12422 <-- M. Oda OUT 8086.
Source: Soil, the Tokara Islands, Japan [3547].
Biochemistry/Physiology: [3547].
Cell wall: LL-A2pm, Ala, Gly, Glu (1 : 2 : 1 : 2); N-acetyl Mur [3547].
Fatty acid: n-C16:1, n-C17:1, n-C18:1 [3547].
Quinone: MK-9(H4) [3547].
Polar lipid: DPG, PI, PG [3547].
G+C (mol%): 67 (HPLC) [3547].
DNA-DNA relatedness: [3547].
Phylogeny: 16S rRNA gene (D85487, Z78208) [3547,5213], RNase P RNA gene (AF110056) [4865].
Other taxonomic data: Polyamine [4623].
Genome sequence: RKHG00000000.
Publication(s) using this strain [A04007].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium sp.
JCM number: 9447 <-- IAM 13175 <-- F. Rodriguez-Valera.
Numerical taxonomy: [3282].
Polar lipid: [3282].
G+C (mol%): 65.4 (Tm) [3637,3639].
DNA-DNA relatedness: [3637,3639].
Phylogeny: 16S rRNA gene (AB081731).
Other taxonomic data: Polyamine [4558]; Sensitivity to antibiotics [3649].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aquifex pyrophilus
JCM number: 9492 <-- DSM 6858 <-- K. O. Stetter Kol5a.
Source: Submarine hot sandy sediment at a depth of 106 m at the Kolbeinsey Ridge north of Iceland [3617].
Cell wall: Type A1γ [3617].
Polar lipid: Alkyl glycerol ether [3617].
G+C (mol%): 39 (Tm), 41.5 (chemical) [3617].
DNA-DNA relatedness: [3617].
Phylogeny: 16S rRNA gene (M83548), [3816].
Other taxonomic data: Polyamine [4613].
  
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Publication(s) using this strain [A04179, A06006].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermoplasma volcanium
JCM number: 9571 <-- IFO 15438 <-- DSM 4299 <-- A. Segerer and K. O. Stetter GSS1.
Source: Solfatara, Vulcano, Porto di Levante, Italy [3650].
Morphology: [3650].
Biochemistry/Physiology: [3650].
G+C (mol%): 38 (Tm, HPLC) [3650].
DNA-DNA relatedness: [3650].
Phylogeny: 16S rRNA gene (AF339746, AJ299215).
Other taxonomic data: Polyamine [3632,5609].
Genome sequence: BA000011 [4950].
Publication(s) using this strain [A04192, A24072].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermoplasma volcanium
JCM number: 9572 <-- IFO 15439 <-- DSM 4300 <-- A. Segerer and K. O. Stetter KD3.
Source: Solfatara, Kawah Domas, Bandung, Indonesia [3650].
Morphology: [3650].
Biochemistry/Physiology: [3650].
G+C (mol%): 40 (Tm) [3650].
Other taxonomic data: Polyamine [3632].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum chaoviator
JCM number: 9573 <-- K. Ihara aus-1.
Source: Clay pan near Leonora, Western Australia [3667].
Biochemistry/Physiology: [8739].
Polar lipid: [8739].
G+C (mol%): Major DNA, 65 [3667], 65.5 [8739].
DNA-DNA relatedness: [8739].
Phylogeny: 16S rRNA gene (D32081) [8861], rhodopsins [8861].
Other taxonomic data: Polyamine [4558].
More information: Archaerhodopsin [3667,3668,3669].
Publication(s) using this strain [B09080].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum sp.
JCM number: 9574 <-- K. Ihara aus-2.
Source: Soil/salt water in desert of Western Australia [3668].
Phylogeny: 16S rRNA gene (D32082) [8861], rhodopsins [8861].
Other taxonomic data: Polyamine [4558].
More information: Archaerhodopsin [3668,3669].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrialba asiatica
JCM number: 9576 <-- M. Kamekura 172P1.
Source: Beach sands with granular salts attached, Japan [4057].
Biochemistry/Physiology: [4057,4964].
Polar lipid: [3711,4057].
G+C (mol%): 62.3 (HPLC) [4964].
DNA-DNA relatedness: [4057,4694].
Phylogeny: 16S rRNA gene (D14123) [4057].
Other taxonomic data: Polyamine [4558].
Taxonomy: [4964].
Genome sequence: AOIO00000000 [12471].
Production: Extracellular protease [3709].
Publication(s) using this strain [A04036, B04134, A05046, A05230, A06250, A10175, B11215, A12159].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrialba taiwanensis
JCM number: 9577 <-- M. Kamekura B1T.
Source: Solar salts, Taiwan [4057].
Biochemistry/Physiology: [4057,4964].
Polar lipid: [4057].
G+C (mol%): 62.3 (HPLC) [4964].
DNA-DNA relatedness: [4057,4964].
Phylogeny: 16S rRNA gene (D14124) [3712,4057].
Other taxonomic data: Polyamine [4558].
Taxonomy: [4964].
Genome sequence: AOIL00000000 [12471].
Publication(s) using this strain [A04036, A10175].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halococcus salifodinae
JCM number: 9578 <-- H. Stan-Lotter BIp.
Source: Salt mine near Bad Ischl, Austria [3659].
Morphology: [3658].
Biochemistry/Physiology: [3658].
Quinone: MK-8(H2), MK-8 [3658].
Polar lipid: [3658,4556].
G+C (mol%): 62 (HPLC) [3658].
Phylogeny: 16S rRNA gene (Z28387, AB004877) [3658,4556,8352], rpoB' (AB477160) [8352].
Other taxonomic data: Polyamine [4558]; Whole-cell protein profile [3658].
Genome sequence: AOME00000000 [12471].
  
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Publication(s) using this strain [A10175, A13150, B15247].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides plantarum
JCM number: 9626 <-- NCIMB 12834 <-- M. D. Collins <-- J. M. Grainger J70.
Source: Herbage [3561].
Biochemistry/Physiology: [3561].
Cell wall: LL-A2pm [3561].
Quinone: MK-8(H4) [3561].
G+C (mol%): 69 (Tm) [3561].
DNA-DNA relatedness: [3561].
Phylogeny: 16S rRNA gene (AF005008, X69973, Z78211) [3561,4327,5213], RNase P RNA gene (AF110039) [4865].
Other taxonomic data: Rapid identification primers [4387]; Polyamine [4623]; 16S-23S rRNA ITS (AF017493) [4385].
Genome sequence: VDMS00000000 [12979].
Publication(s) using this strain [B05227].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Archaeoglobus fulgidus
JCM number: 9628 <-- DSM 4304 <-- K. O. Stetter VC-16.
Source: Hot sediments of marine hydrothermal system, Vulcano, Italy [3718].
Morphology: [3718].
Biochemistry/Physiology: [3718].
Quinone: MK-7(H14) [3725].
Polar lipid: [3683,3720].
G+C (mol%): 46 (Tm) [3718,3719,3720].
DNA-DNA relatedness: [3720].
Phylogeny: 16S rRNA gene (Y00275) [3726], 16S rRNA (X05567) [3727], 23S rRNA (M64487) [3727].
Other taxonomic data: 7S RNA gene (X17237) [3979]; DNA-dependent RNA polymerase [3718]; Genome size [4330]; Polyamine [4204].
Genome sequence: AE000782 [4361].
  
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Publication(s) using this strain [A13533].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Archaeoglobus profundus
JCM number: 9629 <-- DSM 5631 <-- K. O. Stetter and S. Burggraf AV18.
Source: Deep sea hydrothermal system at Guaymas, Mexico [3720].
Morphology: [3720].
Biochemistry/Physiology: [3720].
Polar lipid: [3683,3720].
G+C (mol%): 41 (Tm) [3720].
DNA-DNA relatedness: [3720].
Phylogeny: 16S rRNA gene & ITS1 & 23S rRNA gene (AJ299219).
Other taxonomic data: Genome size [4330]; Polyamine [4204].
Genome sequence: CP001857, CP001858 (plasmid pArcpr01) [8334].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08343.
  
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Publication(s) using this strain [A09250, A23418].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrobaculum aerophilum
JCM number: 9630 <-- DSM 7523 <-- K. O. Stetter and P. Völkl IM2.
Source: Boiling marine water hole at the Maronti Beach, Ischia, Italy [3721].
Morphology: [3721].
Biochemistry/Physiology: [3721].
Polar lipid: [3721].
G+C (mol%): 52 (Tm, HPLC) [3721].
Phylogeny: 16S rRNA gene (L07510) [3721,3722].
Other taxonomic data: Genome size [4330]; Polyamine [4204].
Genome sequence: AE009441 [5196].
More information: Genomic map [4245].
Publication(s) using this strain [A06021, A09181, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanopyrus kandleri
JCM number: 9639 <-- DSM 6324 <-- K. O. Stetter and R. Huber AV19.
Source: Hydrothermally heated deep sea sediment at the Guaymas Basin, the Galf of California [3723].
Morphology: [3723].
Biochemistry/Physiology: [3723].
Polar lipid: [4229].
G+C (mol%): 59 (Tm), 60 (HPLC) [3723].
Phylogeny: 16S rRNA (M59932) [3724].
Other taxonomic data: Cell envelope [3723]; DNA-dependent RNA polymerase [3723]; Polyamine [4613].
Genome sequence: AE009439 [5183].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07495.
  
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Publication(s) using this strain [A08023, A09250, A18509, A22541].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus peptonophilus
JCM number: 9653 <-- C. Kato; JAMSTEC, Japan; OG1.
Source: Deep-sea hydrothermal vent in the western Pacific Ocean [3908].
Morphology: [3908].
Biochemistry/Physiology: [3908,4244].
G+C (mol%): 52 (HPLC) [3908].
DNA-DNA relatedness: [3908].
Phylogeny: 16S rRNA gene (D37982) [3908], 16S rRNA gene (AB055125).
Other taxonomic data: Polyamine [4204].
Genome sequence: CP014750, CP014751 (plasmid).
More information: Culturability [4150].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12568.
  
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Publication(s) using this strain [B04029, A04193, A04230, A05044, B05123, B07136].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natronococcus amylolyticus
JCM number: 9655 <-- T. Kudo Ah-36.
Source: Soil from shores of the Lake Magadi, Kenya [3794].
Biochemistry/Physiology: [3949].
Polar lipid: [3949].
G+C (mol%): 63.5 [3949].
Phylogeny: 16S rRNA gene (D43628) [3949].
Other taxonomic data: Polyamine [4558].
Genome sequence: AOIB00000000 [12471].
Production: Maltotriose-forming α-amylase [3794].
  
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Publication(s) using this strain [A07100, A10175].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloarcula argentinensis
JCM number: 9737 <-- K. Ihara arg-1.
Source: Salinas Chica in the Peninsula Vardez, Chubut, Argentina [4059].
Biochemistry/Physiology: [4184].
Polar lipid: [4184].
G+C (mol%): 62 (Tm) [4184].
DNA-DNA relatedness: [4184].
Phylogeny: 16S rRNA gene (D50849, EF645680, EF645681) [4184,7681,8352], rpoB' (AB477143) [8352].
Other taxonomic data: Polyamine [4558].
Genome sequence: AOLX00000000 [12471].
More information: Cruxrhodopsin [4059].
Publication(s) using this strain [A04036, A05176, B07026, A09023, A10175, B11138, A11179, B13315, A17087, A19033, B24137].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halomicrobium mukohataei
JCM number: 9738 <-- K. Ihara arg-2.
Source: Salinas Grandes in the Andes highlands, Jujuy, Argentina [4059].
Morphology: [5303].
Biochemistry/Physiology: [4184].
Polar lipid: [4184,5303].
G+C (mol%): 65 (Tm) [4184].
DNA-DNA relatedness: [4184].
Phylogeny: 16S rRNA gene (D50850, EF645690, EF645691) [4184,5303,7681,8352], rpoB' (AB477172) [8352].
Other taxonomic data: Polyamine [4558].
Taxonomy: [5303].
Genome sequence: CP001688, CP001689 (plasmid pHmuk01) [8330].
More information: Cruxrhodopsin-2 [4060].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08339.
  
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Publication(s) using this strain [A09023, B10129, A10175, B12083, B12122, A12159, B12351, B13037, B13062, B13097, B13315, B13335, B14016, B14130, B14246, B14250, B15155, B20304, A22284, B22532, B24211].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halococcus sp.
JCM number: 9742 <-- ATCC 43102 <-- NCIMB 767 <-- N. E. Gibbons <-- LMD 33.42.
Polar lipid: [4556].
Phylogeny: 16S rRNA gene (D63786) [4247].
Other taxonomic data: Polyamine [3796,4558].
More information: Identity of the strain [3858].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrinema sp.
JCM number: 9743 <-- M. Kamekura <-- M. Kates <-- R. Latta.
Polar lipid: [4057].
G+C (mol%): 59.2 (Tm) [4556].
Phylogeny: 16S rRNA gene (D14125) [4057].
Other taxonomic data: Polyamine [4558].
Taxonomy: [5541].
More information: Bacteriorhodopsin gene [4307]; Deltarhodopsin [6353]; History of the strain [4307]; Shows low DNA-DNA relatedness with the type strain of Haloterrigena turkmenica [4742].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07558.
Publication(s) using this strain [A04036, B04134, A06020, A11336].
Patent publication(s) using this strain [WO/2015/170609, 2023-56624].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rhodothermus marinus
JCM number: 9785 <-- K. Takai OKD7.
Source: Hydrothermal vent at a depth of 22 m (120-125°C), Tachibana Bay, Nagasaki Pref., Japan.
Biochemistry/Physiology: [4147].
Fatty acid: i-C17:0, a-C15:0, a-C17:0, i-C15:0 [4147,4788].
Quinone: MK-7 [4147].
G+C (mol%): 66.6 (HPLC) [4147].
DNA-DNA relatedness: [4788].
Phylogeny: 16S rRNA gene (AF217493, X95071) [4147,4788].
Other taxonomic data: Polyamine [4464].
Taxonomy: [4788].
More information: Type strain of Rhodothermus obamensis [4147]; Characterization of cellobiose 2-epimerase [8928].
Production: Cellobiose 2-epimerase [8928].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12124.
Publication(s) using this strain [A08170, B08232, A11042, A15098, A17063, A17115, A24487].
Patent publication(s) using this strain [JP2008-095117A, JP2012-130332A, WO/2012/077322, JP2013-143962A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aeropyrum pernix
JCM number: 9820 <-- N. Nomura K1.
Source: Coastal solfataric vent at Kodakara-Jima Island, Japan [4152].
Biochemistry/Physiology: [4152].
Quinone: DMK-6(Hn), MTK-6(Hn) [4605].
Polar lipid: [4152].
G+C (mol%): 67 (HPLC) [4152].
Phylogeny: 16S rRNA gene (D83259) [4152], 16S and 23S rRNA gene (AB008745) [4362].
Other taxonomic data: Polyamine [4464].
Genome sequence: BA000002 [4603,4604].
More information: Intron [4362]; Serine proteinase [4550].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07499.
  
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Publication(s) using this strain [A04022, A04216, C05040, A06021, A07194, A07265, A09177, A09212, A10236, A10238, A10310, A10311, A11047, A11230, A11302, A12002, A12052, A12314, A13099, A13509, A22498, A24460].
Patent publication(s) using this strain [JP2008-092814A, 2020-28240, WO2023-195544].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobaculum gomorrense
JCM number: 9908 <-- DSM 9297 <-- A. Oren DS 2807.
Source: Dead Sea [4099].
Biochemistry/Physiology: [4099].
Polar lipid: [4099].
G+C (mol%): 70 (HPLC) [4099].
Phylogeny: 16S rRNA gene (L37444, AB477982, AB477983) [4099,8352], rpoB' (AB477151) [8352].
Other taxonomic data: Polyamine [4558].
Genome sequence: FQWV00000000.
Publication(s) using this strain [A10175, B11110, A12159, B13426, B17451, B22226].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrococcus horikoshii
JCM number: 9974 <-- C. Kato <-- F. Robb OT-3.
Source: Hydrothermal vent at the Okinawa Trough [4331].
Phylogeny: 16S rRNA gene (AY099169).
Other taxonomic data: Polyamine [4613].
Taxonomy: Designation as the type strain [4741].
Genome sequence: BA000001 [4503,4504].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD05990.
  
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Publication(s) using this strain [A04061, A04193, A05047, A05169, A05173, A05225, A08205, A08242, A09236, A13073, A13147, A17119, A23418].
Patent publication(s) using this strain [JP2007-174945A, JP2007-228897A, JP2007-300899A, JP2008-157807A, JP2009-060921A, JP2009-143857A, WO2009/139392, JP2011-157680A, US 20110014679 B2].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrococcus horikoshii
JCM number: 9975 <-- C. Kato <-- F. Robb JA-1.
Source: Hydrothermal vent at the Okinawa Trough [4331].
DNA-DNA relatedness: [4331].
Phylogeny: 16S rRNA gene (D87344) [4331], gdhA (AF035935) [4331].
Other taxonomic data: Polyamine [4613].
Publication(s) using this strain [A04060, A04157, A18567].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Eubacterium limosum
JCM number: 9978 <-- STAFF 1027 <-- ATCC 8486 <-- A. H. Eggerth ("Bacteroides limosum").
Biochemistry/Physiology: [4495].
Cell wall: Murein type B4 [1376].
G+C (mol%): 47.8 (Tm) [1376].
DNA-DNA relatedness: [1376].
Phylogeny: 16S rRNA (M59120) [1376], 16S rRNA gene (AB595134, LC019782).
Other taxonomic data: Polyamine [4622].
Genome sequence: CP019962.
More information: Betaine fermentation [4495]; Isoflavonoides biochanin A [4817].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium moniliforme
JCM number: 9990 <-- STAFF 1029 <-- ATCC 25546 <-- L. V. Holdeman VPI 0142B <-- A. Prévot 2055.
Source: Infected wound.
Phylogeny: 16S rRNA (L34622), 16S rRNA gene (AB540985, HF558373).
Other taxonomic data: Polyamine [4622].
Genome sequence: JAGGJZ000000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloarcula amylolytica
JCM number: 10024 <-- P. Zhou A5.
Source: Salt lake of Xinjiang, China [4187].
Biochemistry/Physiology: [4187,14636].
Polar lipid: [4187].
G+C (mol%): 67.4 (Tm) [4187].
Phylogeny: 16S rRNA gene, rpoB' gene (PP070410), phylogenomic analyses [14636].
Other taxonomic data: Polyamine [5431].
Genome sequence: JAYMGX000000000 [14636].
More information: It is assigned as the type strain of 'Haloarcula aidinensis' [4187]; It is regarded as a strain of Haloarcula amylolytica [14636].
Publication(s) using this strain [A04036, A04209].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloarcula sp.
JCM number: 10025 <-- P. Zhou B2.
Source: Salt lake of Xinjiang, China [4187].
Biochemistry/Physiology: [4187].
Polar lipid: [4187].
G+C (mol%): 67.9 (Tm) [4187].
Phylogeny: 16S rRNA gene [4188].
Other taxonomic data: Polyamine [5431].
More information: It is assigned as a strain of 'Haloarcula aidinensis' [4187].
Publication(s) using this strain [A04060].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanosarcina barkeri
JCM number: 10043 <-- DSM 800 <-- M. P. Bryant MS.
Source: Anaerobic sewage-sludge digester, Urbana, IL, USA [4190].
Description: [4190,4222,4223].
Polar lipid: [4557].
G+C (mol%): 38.8 (Bd) [4189], 39 (Tm) [4227].
DNA-DNA relatedness: [3698,4227].
Phylogeny: 16S rRNA catalog [4189], 16S rRNA gene (AJ012094).
Other taxonomic data: Polyamine [5431].
Taxonomy: [4189].
Genome sequence: CP009528, CP009527 (plasmid).
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12632.
  
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Publication(s) using this strain [A06207, A06232, A07190, A07197, A07262, A12317, A12318, A14448, A15106, A18003, A18546, A19089, A21005, A22171, A22541, A23158, A24391].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanothermobacter thermautotrophicus
JCM number: 10044 <-- DSM 1053 <-- J. G. Zeikus ΔH.
Source: Anaerobic sewage-sludge [4191].
Biochemistry/Physiology: [4191].
Serology: [4193,4691].
G+C (mol%): 49.7 (Bd) [4189], 52 (Bd) [4191], 50.7 (Tm) [4193].
DNA-DNA relatedness: [3698,4192,4193,6684].
Phylogeny: 16S rRNA catalog [4189], 5S rRNA (X62857) [4192], 16S rRNA gene (X68720) [4228].
Other taxonomic data: Phage typing [4691]; Polyamine [4464]; Whole-cell protein profile [4193].
Taxonomy: [4192,4691].
Genome sequence: AE000666 [4300].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD06276.
  
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Publication(s) using this strain [A06207, A07197, A07262, A11320, A13109, A14203, A16084, A16154, A16556, A23158, A24337].
Patent publication(s) using this strain [JP2013-034389A, JP2013-201980A].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanocaldococcus jannaschii
JCM number: 10045 <-- DSM 2661 <-- J. A. Leigh and W. J. Jones JAL-1.
Source: Base of 'white smoker' chimney on the East Pacific Rise [4194].
Morphology: [4194].
Biochemistry/Physiology: [4194].
Polar lipid: [4557].
G+C (mol%): 31 (Bd) [4194].
Phylogeny: 16S rRNA catalog [4194], 16S rRNA (M59126), 16S rRNA gene (AB603516).
Other taxonomic data: Polyamine [4464].
Taxonomy: [5327].
Genome sequence: L77117, L77118 (plasmid pDSM2661_1), L77119 (plasmid pDSM2661_2) [4306].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12154.
  
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Publication(s) using this strain [B04082, A06028, A07262, A08023, B14155, A16116, A16154, A17582, A20136, A22541].
Patent publication(s) using this strain [2015-202063].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Picrophilus oshimae
JCM number: 10054 <-- DSM 9789 <-- W. Zillig KAW2/2.
Source: Dry, hot soil in the vicinity of Kawayu, Hokkaido, Japan [4195].
Morphology: [4195].
Biochemistry/Physiology: [4195].
Polar lipid: [4195].
G+C (mol%): 36 (HPLC) [4195].
Phylogeny: 16S rRNA gene (X84901) [4195].
DNA typing: RFLP pattern [4195].
Other taxonomic data: DNA-dependent RNA polymerase [4195]; Polyamine [4464].
Taxonomy: [4196].
Genome sequence: FWYE00000000.
Publication(s) using this strain [A04192, B22309].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Picrophilus oshimae
JCM number: 10055 <-- DSM 9790 <-- W. Zillig KAW2/3.
Source: Dry, hot soil in the vicinity of Kawayu, Hokkaido, Japan [4195].
Biochemistry/Physiology: [4195].
Phylogeny: 16S rRNA gene (NR_074187).
DNA typing: RFLP pattern [4195].
Other taxonomic data: Polyamine [4464].
Taxonomy: [4196].
Genome sequence: AE017261 [5712].
More information: The type strain of Picrophilus torridus. Picrophilus torridus is regarded as a later heterotypic synonym of Picrophilus oshimae [14052].
Publication(s) using this strain [A04192].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermocladium modestius
JCM number: 10088 <-- T. Itoh IC-125.
Source: Mud from a spring pool, Noji-onsen, Fukushima, Japan [4407].
Biochemistry/Physiology: [4407].
G+C (mol%): 52.4 (HPLC) [4407].
DNA-DNA relatedness: [4407].
Phylogeny: 16S rRNA gene (AB005296) [4407].
Other taxonomic data: Polyamine [4613].
Genome sequence: BBBF00000000; BMNL00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08742.
  
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Publication(s) using this strain [A04053, A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermocladium modestius
JCM number: 10089 <-- T. Itoh IC-139.
Source: Hot spring water, Kawayu-onsen, Hokkaido, Japan [4407].
Biochemistry/Physiology: [4407].
G+C (mol%): 51.9 (HPLC) [4407].
DNA-DNA relatedness: [4407].
Other taxonomic data: Polyamine [4613].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermocladium modestius
JCM number: 10090 <-- T. Itoh IC-142.
Source: Hot spring water, Tamagawa-onsen, Akita, Japan [4407].
Biochemistry/Physiology: [4407].
G+C (mol%): 52.4 (HPLC) [4407].
DNA-DNA relatedness: [4407].
Other taxonomic data: Polyamine [4613].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermotoga maritima
JCM number: 10099 <-- DSM 3109 <-- K. O. Stetter MSB8.
Source: Geothermally heated sea sediment, Porto di Levante, Vulcano, Italy [4100].
Cell wall: Mur, GlcNAc, D-Glu, L & D-Ala, L & D-Lys (0.4 : 0.7 : 1 : 1.4 : 0.9) [4100].
Fatty acid: C12 - C18 fatty acid (7%), long chain dicarboxylic fatty acids (10%) and unknown hydrophobic compounds (83%) [4100].
G+C (mol%): 46 (Tm) [4100].
Phylogeny: 16S rRNA (M21774), [3816].
Other taxonomic data: Polyamine [4464,5950].
Genome sequence: AE000512 [4644].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07695.
  
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Publication(s) using this strain [A04179, A04191, B05123, A06006, B07136, A07195, A08174, B14155, A16464].
Patent publication(s) using this strain [JP2007-111017A, JP2008-048725A, WO2019/065156].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum distributum
JCM number: 10118 <-- NCIMB 13203 <-- VKM B-1733 <-- I. S. Zvyagintseva 1m.
Source: Salt soil crust, Turkmenistan [3395].
Morphology: [3643].
Biochemistry/Physiology: [3395].
Polar lipid: [4057,4165].
G+C (mol%): 63.9 (Tm) [5655].
DNA-DNA relatedness: [4165,5655].
Phylogeny: 5S rRNA (L27343) [4165], 16S rRNA gene (D63572, L26170) [4057,4165,8352], rpoB' (AB477180) [8352].
Other taxonomic data: Polyamine [4558].
Taxonomy: [4057,4151,4185].
Genome sequence: AOJN00000000 [12471].
Publication(s) using this strain [B08111, B09080, A14504].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus fumicolans
JCM number: 10128 <-- CIP 104690 <-- A. Godfroy ST557.
Source: Deep-sea hydrothermal vent in the Northern Fiji Basin [4252].
Biochemistry/Physiology: [4252].
G+C (mol%): 55 (Tm), 54 (HPLC) [4252].
Phylogeny: 16S rRNA gene (Z70250) [4252], 16S rRNA gene (AB055122).
Other taxonomic data: Polyamine [4613,4920].
More information: Correction of the CIP number [4645].
Publication(s) using this strain [B04029, A04193, B05123, B07136, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanobacterium formicicum
JCM number: 10132 <-- DSM 1535 <-- R. S. Wolfe and W. E. Balch <-- M. P. Bryant MF.
Source: Sewage sludge digestor, Urbana, IL, USA [4253].
Polar lipid: [4557].
G+C (mol%): 40.7 (Bd) [4189].
Phylogeny: 16S rRNA catalog [4189], 16S rRNA gene (AF169245).
Other taxonomic data: Polyamine [5431].
Taxonomy: [4255,4256].
Genome sequence: BBES01000000, LN515531.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12633.
  
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Publication(s) using this strain [A07262, A09250, B13323, A15106, A21005, A24391].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanospirillum hungatei
JCM number: 10133 <-- DSM 864 <-- M. P. Bryant <-- J. G. Ferry JF1.
Source: Sewage sludge [4257].
Biochemistry/Physiology: [4257].
G+C (mol%): 45 (Bd) [4257].
Phylogeny: 16S rRNA catalog [4189], 16S rRNA (M60880) [4299], 16S rRNA gene (AB517987) [8383].
Other taxonomic data: Polyamine [5431].
Genome sequence: CP000254.
  
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Publication(s) using this strain [A07262, B14409, A17544, A23158, A23368].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Stetteria hydrogenophila
JCM number: 10135 <-- DSM 11227 <-- M. Thomm 4ABC.
Source: Marine sediment of a hydrothermal system at PaleohoriBay in Milos, Greece [4264].
Biochemistry/Physiology: [4264].
G+C (mol%): 65 (HPLC) [4264].
DNA-DNA relatedness: [4264].
Phylogeny: 16S rRNA gene (Y07784) [4264].
Other taxonomic data: Polyamine [4613].
  
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Publication(s) using this strain [A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus guaymasensis
JCM number: 10136 <-- F. Canganella TYS.
Source: Guaymas Basin hydrothermal vent, Gulf of California [4526].
Biochemistry/Physiology: [4526,4527].
Polar lipid: [4527].
G+C (mol%): 46.0 (HPLC) [4526].
DNA-DNA relatedness: [4509].
Phylogeny: 16S rRNA gene (Y08385) [4509,4527].
Other taxonomic data: Polyamine [4920].
Genome sequence: CP007140.
Publication(s) using this strain [B04029, A04193, B05123, B07136, A07262, B13278].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus aggregans
JCM number: 10137 <-- F. Canganella TY.
Source: Guaymas Basin hydrothermal vent, Gulf of California [4526].
Biochemistry/Physiology: [4526,4527].
Polar lipid: [4527].
G+C (mol%): 42.0 (HPLC) [4526].
DNA-DNA relatedness: [4509].
Phylogeny: 16S rRNA gene (Y08384) [4509,4527].
Other taxonomic data: Polyamine [4920].
Genome sequence: CP099582.
Publication(s) using this strain [A04193, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermaerobacter marianensis
JCM number: 10246 <-- K. Takai 7p75a.
Source: Mud, the Mariana Trench Challenger Deep at a depth of 10,897 m [4570].
Biochemistry/Physiology: [4570].
Fatty acid: [4570].
G+C (mol%): 72.5 (HPLC) [4570].
Phylogeny: 16S rRNA gene (AB011495) [4570].
Other taxonomic data: Polyamine [4921].
Genome sequence: CP002344 [8522].
  
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Publication(s) using this strain [A04179, B06075, B09167, A11258, A15500].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum distributum
JCM number: 10247 <-- VKM B-1739 <-- I. S. Zvyagintseva 4p.
Source: Salt crust, Ashgabat, Turkmenistan [3395].
Biochemistry/Physiology: [3395,5655].
Polar lipid: [4165,5655].
G+C (mol%): 64.4 (Tm) [5655].
DNA-DNA relatedness: [4165,5655].
Phylogeny: 16S rRNA (L26117) [4165,5655,8352], 16S rRNA gene (AB090169), rpoB' (AB477187) [8352].
Other taxonomic data: Polyamine [5431]; Multilocus sequence analysis (atpB, EF-2, ginA, ppsA and rpoB') [12920]; Phylogenomic analysis on 1347 core translated gene sequences [12920]; Average nucleotide identity, genome-to-genome distances [12920].
Taxonomy: Proposal as the type strain of Halorubrum terrestre [5655]; Reclassification to Halorubrum distributum [12920].
Genome sequence: AOIW00000000 [12471].
  
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Publication(s) using this strain [B04134, A06078, B07029, A10175, A14504, A20263].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Faecalitalea cylindroides
JCM number: 10261 <-- DSM 3983 <-- ATCC 27803 <-- E. P. Cato VPI 3654.
Source: Human feces [3079].
Biochemistry/Physiology: [3079,10218].
G+C (mol%): 31 (Tm) [3079].
Phylogeny: 16S rRNA gene (AB558487, L34617).
Other taxonomic data: Polyamine [4622].
Taxonomy: [10218].
Genome sequence: AWVI00000000.
  
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Publication(s) using this strain [A07179, A09198, A10101, A15541, A22109, A24131].
Patent publication(s) using this strain [2023-150100, 2023-152713].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lancefieldella rimae
JCM number: 10299 <-- DSM 7090 <-- ATCC 49626 <-- VPI D140H-11A.
Source: Human gingival crevices [4477].
Biochemistry/Physiology: [3162,4477].
Fatty acid: [4477].
Enzyme electrophoretic profile: [4477].
G+C (mol%): 45 (Tm) [4477].
DNA-DNA relatedness: [4477].
Phylogeny: 16S rRNA gene (AB540986, X67149) [3162].
Taxonomy: [3162,12227].
Genome sequence: ACFE00000000, JQCP00000000.
More information: Cellular polyamines [6386].
  
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Publication(s) using this strain [B08036, A10013, A10214].
Patent publication(s) using this strain [WO2010/098103, WO2017/073753].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Caldivirga maquilingensis
JCM number: 10306 <-- T. Itoh and P. C. Sanchez IC-166.
Source: Acidic hot spring, Mt. Maquiling, the Philippines [4592].
Biochemistry/Physiology: [4592].
G+C (mol%): 43.3 (HPLC) [4592].
DNA-DNA relatedness: [4592].
Other taxonomic data: Polyamine [4920].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Caldivirga maquilingensis
JCM number: 10307 <-- T. Itoh and P. C. Sanchez IC-167.
Source: Acidic hot spring, Mt. Maquiling, the Philippines [4592].
Biochemistry/Physiology: [4592].
G+C (mol%): 43.0 (HPLC) [4592].
DNA-DNA relatedness: [4592].
Phylogeny: 16S rRNA gene (AB013926) [4592].
Other taxonomic data: Polyamine [4920].
Genome sequence: CP000852.
More information: Intron [5461].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD06301.
  
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Publication(s) using this strain [A06021, A09212, A15564].
Patent publication(s) using this strain [JP2011-109937A].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanothermus fervidus
JCM number: 10308 <-- DSM 2088 <-- K. O. Stetter V24S.
Source: Hot spring, Iceland [4337].
Biochemistry/Physiology: [4337].
Cell wall: [4709].
Polar lipid: [4229,4557,4709].
Serology: [4709].
G+C (mol%): 33 (Tm, HPLC) [4337].
DNA-DNA relatedness: [3698,4709].
Phylogeny: 16S rRNA (M59145).
Other taxonomic data: Polyamine [4613].
Genome sequence: CP002278 [9771].
  
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Publication(s) using this strain [A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sulfophobococcus zilligii
JCM number: 10309 <-- DSM 11193 <-- R. Hensel K1.
Source: Hot alkaline spring near Hveragerdi, Iceland [4338].
Biochemistry/Physiology: [4338].
G+C (mol%): 54.7 (Tm) [4338].
Phylogeny: 16S rRNA gene (X98064) [4338].
Other taxonomic data: Polyamine [4613].
  
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Publication(s) using this strain [A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanobacterium sp.
JCM number: 10400 <-- K. Adachi 3544-4.
Source: Soil (cellulose-amended) from a paddy field, Okinawa, Japan [4626].
Biochemistry/Physiology: [4626].
Phylogeny: 16S rRNA gene (Y18732) [4626].
Other taxonomic data: Polyamine [5431].
Publication(s) using this strain [A07262, A09250].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Palaeococcus ferrophilus
JCM number: 10417 <-- K. Takai strain DMJ.
Source: Deep-sea hydrothermal vent chimney, Myojin Knoll, Okinawa Trough, Japan [4718].
Biochemistry/Physiology: [4718].
Polar lipid: [4718].
G+C (mol%): 53.5 (HPLC) [4718].
Phylogeny: 16S rRNA gene (AB019239) [4718].
Other taxonomic data: Polyamine [4920].
Genome sequence: LANF00000000.
More information: The JCM accession number was incorrectly cited as JCM 10246 in the original description [4718], but this was corrected in Ref. [4745].
  
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Publication(s) using this strain [A04193, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrinema pellirubrum
JCM number: 10476 <-- NCIMB 786 <-- M. Formisano.
Biochemistry/Physiology: [4510].
Quinone: MK-8, MK-8(H2) [2070].
G+C (mol%): Major DNA, 69.9: minor DNA, 60.0 (Bd) [3366].
DNA-DNA relatedness: [3366].
Phylogeny: 16S rRNA gene (AJ002947) [4510], 16S rRNA gene (AB477231) [8352].
Other taxonomic data: Whole-cell protein profile [4510]; Polyamine [5431].
Genome sequence: AOIE00000000 [12471], CP003372, CP003373 (plasmid pNATPE01), CP003374 (plasmid pNATPE02).
Publication(s) using this strain [A04036, A07059, A07100, B08092, A10079, A10175, B11062, A12159, A12449, A15456, A22284].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorubrum trapanicum
JCM number: 10477 <-- NCIMB 13488 <-- W. D. Grant <-- NRC 34021.
Phylogeny: 16S rRNA gene (X82168) [4058].
Other taxonomic data: Polyamine [5431].
Taxonomy: An equivalent strain, NCIMB 13488, is proposed as the neotype strain of Halorubrum trapanicum; however, the Judicial Commission of ICSP decided that it may be the type strain of the species [4544,5458].
Genome sequence: BAAADX010000000, JAGGKE010000000.
Publication(s) using this strain [B07029, B07094, B08111, B09080, A10175].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrinema versiforme
JCM number: 10478 <-- P. Zhou XF10.
Source: Aibi salt lake, Xinjiang, China [4742].
Polar lipid: [4742].
G+C (mol%): 64.2 (HPLC) [4742].
Phylogeny: 16S rRNA gene (AB023426) [4742].
Other taxonomic data: Polyamine [5431].
Genome sequence: AOID00000000 [12471].
Publication(s) using this strain [B06137, A07100, B08092, A10175, A11179, A14504, A18510].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermosipho japonicus
JCM number: 10495 <-- K. Takai IHB1.
Source: Deep-sea hydrothermal vent chimney, Iheya Basin in the Okinawa area, Japan [4703].
Biochemistry/Physiology: [4703].
Fatty acid: [4703].
G+C (mol%): 31.4 (HPLC) [4703].
DNA-DNA relatedness: [4703].
Phylogeny: 16S rRNA gene (AB024932) [4703].
Other taxonomic data: Polyamine [4921].
Genome sequence: JACHEX010000000.
  
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Publication(s) using this strain [A04179, B11111, B13278].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sulfurisphaera tokodaii
JCM number: 10545 <-- T. Oshima 7.
Source: Beppu hot springs, Japan [5166].
Biochemistry/Physiology: [5161,12134].
DNA-DNA relatedness: [5161].
Phylogeny: 16S rRNA gene [5161].
Other taxonomic data: Polyamine [5609].
Taxonomy: Reclassification [12134].
Genome sequence: BA000023 [5046].
More information: Thermostable esterase [5951]; Glucose-1-phophate thymidylyltransferase homologue [6171].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07500.
Publication(s) using this strain [A04022, A04062, A05175, A06021, A06197, A06248, A08165, A08256, A09211, A09212, A10060, A11073, A11310, A13073, A13491, A14089, A15163, A17582, A18007, A18422, A20094, B22309].
Patent publication(s) using this strain [JP2007-174945A, JP2007-325524A, JP2008-148584A, WO2009/107821, 2017-216930, 2021-78427].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanogenium cariaci
JCM number: 10550 <-- DSM 1497 <-- W. E. Balch <-- R. S. Wolfe and J. A. Romesser JR1.
Source: Sediment, the Cariaco Trench [4560].
Biochemistry/Physiology: [4560,4562].
Polar lipid: [4557].
G+C (mol%): 51.6 (Bd) [4189,4560].
Phylogeny: 16S rRNA catalog [4189], 16S rRNA (M59130), 16S rRNA gene (FR733663).
Other taxonomic data: Polyamine [5431].
Taxonomy: [4562].
Genome sequence: BBBG00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12569.
  
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Publication(s) using this strain [A07262, B24285].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanomicrobium mobile
JCM number: 10551 <-- DSM 1539 <-- R. S. Wolfe BP <-- P. H. Smith <-- M. J. B. Paynter and R. E. Hungate 1.
Source: Bovine rumen contents [4563].
Biochemistry/Physiology: [4563].
G+C (mol%): 48.8 (Bd) [4189].
Phylogeny: 16S rRNA catalog [4189], 16S rRNA gene (M59142).
Other taxonomic data: Polyamine [5431].
Genome sequence: JOMF00000000.
  
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Publication(s) using this strain [A07262, A21005].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus gorgonarius
JCM number: 10552 <-- DSM 10395 <-- E. A. Bonch-Osmolovskaya W-12.
Source: Geothermal vent in the tidal zone of Whale Island, New Zealand [4564].
Biochemistry/Physiology: [4564].
G+C (mol%): 50.6 (Tm) [4564].
DNA-DNA relatedness: [4564].
Phylogeny: 16S rRNA gene (Y16226) [4564], 16S rRNA gene (AB055123).
Other taxonomic data: Polyamine [4920].
Genome sequence: CP014855.
Publication(s) using this strain [B04029, A04193, B05123, B07136, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus pacificus
JCM number: 10553 <-- DSM 10394 <-- E. A. Bonch-Osmolovskaya P-4.
Source: Geothermally heated bottom deposits of the Bay of Plenty, New Zealand [4564].
Biochemistry/Physiology: [4564].
G+C (mol%): 53.3 (Tm) [4564].
DNA-DNA relatedness: [4564].
Phylogeny: 16S rRNA gene (Y16227) [4564], 16S rRNA gene (AB055124).
Other taxonomic data: Polyamine [4920].
Genome sequence: CP015102.
Publication(s) using this strain [A04193, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus zilligii
JCM number: 10554 <-- DSM 2770 <-- H. Morgan AN1.
Source: Thermal pool at Kuirau Park, Rotorua, New Zealand [4565].
Biochemistry/Physiology: [4565].
G+C (mol%): 46.2 (Tm) [4565], 54.48 (genome sequence) [9132].
Phylogeny: 16S rRNA gene (U76534) [4566].
Other taxonomic data: Polyamine [4920,5609].
Genome sequence: AJLF00000000 [9132].
  
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Publication(s) using this strain [A04193, A07262, A08175].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hydrogenobacter subterraneus
JCM number: 10560 <-- K. Takai HGP1.
Source: Water sample from a deep subsurface geothermal water pool at a depth of 1,500 m in the Hacchoubaru geothermal plant, Oita, Japan [5004].
Biochemistry/Physiology: [5004].
Fatty acid: [5004].
G+C (mol%): 44.7 (HPLC) [5004].
DNA-DNA relatedness: [5004].
Phylogeny: 16S rRNA gene (AB026268) [5004].
Other taxonomic data: Polyamine [5950].
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, A or C; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrobaculum oguniense
JCM number: 10595 <-- Y. Sako TE7.
Source: Terrestrial hot spring at Oguni-cho, Kumamoto, Japan [4896].
Biochemistry/Physiology: [4896].
G+C (mol%): 48 (HPLC) [4896].
DNA-DNA relatedness: [4896].
Phylogeny: 16S rRNA gene (AB029339) [4896].
Other taxonomic data: Polyamine [5609].
Genome sequence: CP003316 [9162].
More information: Intron [5461].
  
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Publication(s) using this strain [A06021, A07175, A09212, A22498].
Patent publication(s) using this strain [WO2023-195544].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanocalculus pumilus
JCM number: 10627 <-- M. Hatsu HMT-1.
Source: Leachate of waste disposal site, the port of Osaka, Japan [4803].
Biochemistry/Physiology: [4803].
G+C (mol%): 51.9 (HPLC) [4803].
DNA-DNA relatedness: [4803].
Phylogeny: 16S rRNA gene (AB008853, AB020530) [4803].
Other taxonomic data: Polyamine [5431].
  
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Publication(s) using this strain [A07262, A13145].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natronorubrum bangense
JCM number: 10635 <-- Y. Xu A33.
Source: Sediment of the Bange salt-alkaline lake, Tibet [4614].
Biochemistry/Physiology: [4614].
Polar lipid: [4614].
G+C (mol%): 59.9 (Tm) [4614].
Phylogeny: 16S rRNA gene (Y14028) [4614].
Other taxonomic data: Polyamine [5431].
Genome sequence: AOHY00000000 [12471], CP031305, CP031306 (plasmid unnamed1), CP031307 (plasmid unnamed2), CP031308 (plasmid unnamed3), CP031309 (plasmid unnamed4).
Publication(s) using this strain [A05172, A10175, A12159, A13145, A14504, A15576, A16122, A18510, A19489].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natronorubrum tibetense
JCM number: 10636 <-- Y. Xu GA33.
Source: Sediment of the Bange salt-alkaline lake, Tibet [4614].
Biochemistry/Physiology: [4614].
Polar lipid: [4614].
G+C (mol%): 60.1 (Tm) [4614].
Phylogeny: 16S rRNA gene (AB005656) [4614].
Other taxonomic data: Polyamine [5431].
Genome sequence: ARPH00000000 [12471].
Publication(s) using this strain [A10175].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halogeometricum borinquense
JCM number: 10706 <-- ATCC 700274 <-- R. Montalvo-Rodríguez PR3.
Source: Solar saltern, Cabo Rojo, Puerto Rico [4670].
Biochemistry/Physiology: [4670,9666].
Polar lipid: [4670,9666].
G+C (mol%): 59 (HPLC) [4670].
Phylogeny: 16S rRNA gene (AF002984) [4670,8352], rpoB' (AB477171) [8352].
Other taxonomic data: Polyamine [5431].
Genome sequence: AOHT00000000 [12471], CP001690 [8328].
  
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Publication(s) using this strain [A04036, B06068, B07134, A07283, B10129, B10159, A10175, B10177, B10187, A12133, A12159].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Alkaliphilus transvaalensis
JCM number: 10712 <-- K. Takai SAGM1.
Source: Mine water containment dam at 3.2 km below land surface in the East Driefontein gold mine, near Carletonville, South Africa [5002].
Biochemistry/Physiology: [5002].
Fatty acid: [5002].
G+C (mol%): 36.4 (HPLC) [5002].
Phylogeny: 16S rRNA gene (AB037677) [5002].
Other taxonomic data: Polyamine [5950].
Genome sequence: JHYF00000000.
  
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Publication(s) using this strain [A04179, B15161].
Patent publication(s) using this strain [2015-86127].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanococcus maripaludis
JCM number: 10722 <-- DSM 2067 <-- W. J. Jones JJ.
Source: Salt marsh sediment near Pawley's Island, SC, USA [4708].
Biochemistry/Physiology: [4162,4164,4708].
Serology: [4164,4708].
G+C (mol%): 33 (Bd) [4708], 33.4 (HPLC) [4162].
DNA-DNA relatedness: [4164].
Phylogeny: 16S rRNA catalog [4708], 16S rRNA (U38484) [4164], 16S rRNA gene (KC139247).
Other taxonomic data: Whole-cell protein profile [4164]; Polyamine [5431].
Genome sequence: CP026606.
  
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Publication(s) using this strain [B04082, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanothermus sociabilis
JCM number: 10723 <-- DSM 3496 <-- K. O. Stetter KF1-Fl.
Source: Solfataric waterhole, Kerlingarfjöll, Iceland [4709].
Biochemistry/Physiology: [4709].
Cell wall: [4709].
Polar lipid: [4709].
Serology: [4709].
G+C (mol%): 33 (Tm), 32.1 (HPLC) [4709].
DNA-DNA relatedness: [4709].
Phylogeny: 16S rRNA gene (AF095273, HE654004).
Other taxonomic data: Polyamine [4920].
  
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Publication(s) using this strain [A07262, A08023].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermus aquaticus
JCM number: 10724 <-- DSM 625 <-- T. D. Brock YT-1.
Source: Mushroom Spring, Yellowstone National Park, WY, USA [4710].
Biochemistry/Physiology: [4710,4774].
Cell wall: Orn [4772].
Quinone: MK-8.
G+C (mol%): 67.4 (Bd) [4710].
DNA-DNA relatedness: [4772].
Phylogeny: 16S rRNA gene (L09663) [4832].
Other taxonomic data: Polyamine [4464]; Sensitivity to antibiotics [4710].
Genome sequence: LHCI00000000.
Publication(s) using this strain [A18083].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanoculleus chikugoensis
JCM number: 10825 <-- S. Asakawa MG62.
Source: Paddy field soil, Chikugo, Fukuoka, Japan [5035].
Biochemistry/Physiology: [5035].
Polar lipid: [5035].
G+C (mol%): 62.2 (HPLC) [5035].
DNA-DNA relatedness: [5035].
Phylogeny: 16S rRNA gene (AB038795) [5035].
Other taxonomic data: Polyamine [5431].
Genome sequence: AP019781.
Publication(s) using this strain [A07262, A08023].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus aegaeus
JCM number: 10828 <-- M. Thomm P5.
Source: Sediment of Palaeochori Bay, Milos, Greece [4847].
Biochemistry/Physiology: [4847].
G+C (mol%): 45.5 (HPLC) [4847].
DNA-DNA relatedness: [4847].
Phylogeny: 16S rRNA gene (AJ012643).
Other taxonomic data: Polyamine [5609].
  
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Publication(s) using this strain [A04193, A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Staphylothermus hellenicus
JCM number: 10830 <-- M. Thomm P8.
Source: Geothermally heated sediment at Palaeochori Bay, Milos, Greece [4847].
Biochemistry/Physiology: [4847].
G+C (mol%): 38.8 (HPLC) [4847].
DNA-DNA relatedness: [4847].
Phylogeny: 16S rRNA gene (AJ012645) [4847].
Other taxonomic data: Polyamine [5609].
Genome sequence: CP002051 [8820].
  
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Publication(s) using this strain [A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natronobacterium nitratireducens
JCM number: 10879 <-- P. Zhou C231.
Source: Clay from Chahannao soda lake, Inner Mongolia, China [5037].
Biochemistry/Physiology: [5037].
Polar lipid: [5037].
G+C (mol%): 63.8 (HPLC) [5037].
DNA-DNA relatedness: [5037, 14635].
Phylogeny: 16S rRNA gene (AB045012) [5037,8352], rpoB' (AB477154) [8352], phylogenomic analyses [14635].
Other taxonomic data: Polyamine [5431].
Taxonomy: [5353].
Genome sequence: AOMA00000000 [12471].
More information: The species is proposed to transfer from Halobiforma to Natronobacterium as Natronobacterium nitratireducens [14635].
  
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Publication(s) using this strain [A07100, A10175, A14504].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natronobacterium nitratireducens
JCM number: 10880 <-- P. Zhou C42.
Source: Clay from Chahannao soda lake, Inner Mongolia, China [5037].
Biochemistry/Physiology: [5037].
Polar lipid: [5037].
G+C (mol%): 63.5 (HPLC) [5037].
DNA-DNA relatedness: [5037].
Other taxonomic data: Polyamine [5431].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermotoga petrophila
JCM number: 10881 <-- T. Maruyama RKU-1.
Source: Oil reservoir near the coast of the Sea of Japan, Niigata, Japan [4743,5039].
Biochemistry/Physiology: [4743,5039].
G+C (mol%): 46.8 (HPLC) [4743], 46.6 (HPLC) [5039].
DNA-DNA relatedness: [5039].
Phylogeny: 16S rRNA gene (AB027016) [4743,5039], gyrB (AB039770) [5039].
Other taxonomic data: Polyamine [5950].
Genome sequence: CP000702.
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermotoga naphthophila
JCM number: 10882 <-- T. Maruyama RKU-10.
Source: The production fluid of the Kubiki oil reservoir, Niigata, Japan [5039].
Biochemistry/Physiology: [5039].
G+C (mol%): 46.1 (HPLC) [5039].
DNA-DNA relatedness: [5039].
Phylogeny: 16S rRNA gene (AB027017) [5039], gyrB (AB039771) [5039].
Other taxonomic data: Polyamine [5950].
Genome sequence: CP001839.
Publication(s) using this strain [A04179, A14514, A15145, A15146, A24189].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermus thermophilus
JCM number: 10941 <-- S. Kuramitsu <-- T. Oshima HB8.
Source: Hot spring water at Mine Hot Spring, Shizuoka, Japan [4770,4771].
Biochemistry/Physiology: [4771,4774].
Cell wall: Orn [4772].
Quinone: MK-8 [4772].
G+C (mol%): 69 (chemical) [4771].
DNA-DNA relatedness: [4772,4774].
Phylogeny: 16S rRNA gene (AB603517, X07998) [4832].
Other taxonomic data: Polyamine [5950].
Taxonomy: Designation as the type strain [4772,4774].
Genome sequence: AP008226 (chromosome), AP008227 (plasmid pTT27), AP008228 (plasmid pTT8); AP024984.1 (chromosome), AP024985.1 (plasmid pTT27), AP024986.1 (plasmid pTT8).
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD05989.
  
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Publication(s) using this strain [A04179, A08174, A12080, A13001, A14503, A19186, A19533, A20077, A21402, A22527, A24347, A24486].
Patent publication(s) using this strain [2019-156695].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ferroplasma acidiphilum
JCM number: 10970 <-- DSM 12658 <-- P. N. Golyshin strain Y.
Source: Bioleaching pilot plant, Tula, Russia [4790].
Biochemistry/Physiology: [4790].
Polar lipid: [4790].
G+C (mol%): 36.5 (HPLC) [4790].
Phylogeny: 16S rRNA gene (AJ224936) [4790].
Other taxonomic data: Polyamine [5609].
Genome sequence: CP015363.
  
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Publication(s) using this strain [A04179, A04192, A12437, A14434].
Delivery category: Domestic, A or C; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pelotomaculum thermopropionicum
JCM number: 10971 <-- H. Imachi SI.
Source: Methanogenic granular sludge in a thermophilic upflow anaerobic sludge blanket reactor [4796].
Biochemistry/Physiology: [5302].
Fatty acid: i-C15:0 [5302].
Quinone: MK-7, MK-7(H4) [5302].
G+C (mol%): 52.8 (HPLC) [5302].
Phylogeny: 16S rRNA gene (AB035723) [4796].
Other taxonomic data: Polyamine [5950].
Genome sequence: AP009389 [12520].
More information: Syntrophic association with hydrogenotrophic methanogens [4796]; Central catabolic pathway [12520].
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hydrogenothermus marinus
JCM number: 10974 <-- M. Thomm VM1.
Source: Marine hydrothermal area of Vulcano Island, Italy [5038].
Biochemistry/Physiology: [5038].
Fatty acid: C18:0, C18:1ω9c, C20:1ω9c [5038].
Quinone: MTK-7 analog [5038].
Polar lipid: [5038].
G+C (mol%): 43.0 (HPLC) [5038].
Phylogeny: 16S rRNA gene (AJ292525) [5038].
Other taxonomic data: Polyamine [5950].
Genome sequence: REFO00000000.
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus waiotapuensis
JCM number: 10985 <-- J. M. González WT1.
Source: Freshwater hot spring in the Lake Taupo area of North Island, New Zealand [4802].
Biochemistry/Physiology: [4802].
G+C (mol%): 50.4 (Tm) [4802].
DNA-DNA relatedness: [4802].
Phylogeny: 16S rRNA gene (AF134982) [4802], 16S rRNA gene (AB055127).
Other taxonomic data: Polyamine [5609].
Genome sequence: JAVDZE010000000.
  
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Publication(s) using this strain [A04193, A07262, A24421].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrialba hulunbeirensis
JCM number: 10989 <-- Y. Ma X21.
Source: Sediment from a soda lake in Inner Mongolia Autonomous Region, China [5036].
Biochemistry/Physiology: [5036].
Polar lipid: [5036].
G+C (mol%): 64.3 (Tm) [5036].
DNA-DNA relatedness: [5036].
Phylogeny: 16S rRNA gene (AF262026) [5036].
Other taxonomic data: Polyamine [5431].
Genome sequence: AOIM00000000 [12471].
Publication(s) using this strain [A07100, A10175, A14504].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrialba chahannaoensis
JCM number: 10990 <-- Y. Ma C112.
Source: Sediment from a soda lake in Inner Mongolia Autonomous Region, China [5036].
Biochemistry/Physiology: [5036].
Polar lipid: [5036].
G+C (mol%): 63.7 (Tm) [5036].
DNA-DNA relatedness: [5036].
Phylogeny: 16S rRNA gene (AJ004806) [5036].
Other taxonomic data: Polyamine [5431].
Genome sequence: AOIN00000000 [12471].
Publication(s) using this strain [A07100, A10175, A14504].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lachnoanaerobaculum saburreum
JCM number: 11021 <-- CIP 105341 <-- J. P. Carlier AIP 10202 <-- ATCC 33271 <-- L. V. Holdeman VPI 11763 <-- J. M. Hardie T2.
Source: Human oral cavity [9327].
Biochemistry/Physiology: [9327].
G+C (mol%): 37 (HPLC) [9327].
Phylogeny: 16S rRNA gene (AB525414).
Other taxonomic data: Polyamine [4622].
Genome sequence: AEPW00000000.
  
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Publication(s) using this strain [A13538].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haloarcula marismortui
JCM number: 11048 <-- DSM 11927 <-- A. Oren <-- M. Kessel 801030/1.
Source: Brine water from Sebkha Gavish, Southern Sinai, Egypt [4831].
Morphology: [4831].
Biochemistry/Physiology: [4806].
Polar lipid: [4806].
G+C (mol%): 60.1 (Tm) [4806].
DNA-DNA relatedness: [4806].
Phylogeny: 16S rRNA gene (AB010964, AB010965, EF645689, EF645694) [4806,7681,8352], rpoB' (AB477147) [8352].
Other taxonomic data: Polyamine [5431].
Genome sequence: RBWW00000000.
More information: The type strain of Haloarcula quadrata [4831]. It is regarded as a later heterotypic synonym of Haloarcula marismortui [14066].
Publication(s) using this strain [A04036, B07026, A09023, A10175, B11138, A11179, B13315, A17087, A19033].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halorhabdus utahensis
JCM number: 11049 <-- DSM 12940 <-- M. Wainø AX-2.
Source: Sediment of Great Salt Lake, UT, USA [4807].
Biochemistry/Physiology: [4807].
Quinone: MK-8, MK-8(H2) [4807].
Polar lipid: [4807].
G+C (mol%): 64 (HPLC) [4807].
Phylogeny: 16S rRNA gene (AF071880) [4807,8352], rpoB' (AB477175) [8352].
Other taxonomic data: Polyamine [5431].
Genome sequence: CP001687 [8404].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08338.
  
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Publication(s) using this strain [A10175, B11162, A12159, A22263].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrinema thermotolerans
JCM number: 11050 <-- DSM 11552 <-- R. Montalvo-Rodríguez PR5.
Source: Saltern crystallizer pond, Cabo Rojo, Puerto Rico [4808].
Biochemistry/Physiology: [4808].
Polar lipid: [4808].
G+C (mol%): 63.3 (HPLC) [4808].
DNA-DNA relatedness: [4808].
Phylogeny: 16S rRNA gene (AF115478) [4808].
Other taxonomic data: Polyamine [5431].
Taxonomy: Proposal of transfer of Haloterrigena thermotolerans to the genus Natrinema as Natrinema thermotolerans [13503].
Genome sequence: AOIR00000000 [12471], CP031303.
Publication(s) using this strain [B05125, A10175].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Halobacterium sp.
JCM number: 11081 <-- ATCC 700922 <-- S. DasSarma <-- F. Doolittle NRC-1.
Phylogeny: 16S rRNA gene (AB603514).
Other taxonomic data: Polyamine [5431].
Genome sequence: AE004437, AE004438 (plasmid pNRC200) [4848], AF016485 (plasmid pNRC100) [4856].
More information: Genome organization [4849].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07823.
  
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Publication(s) using this strain [A04036, B07134, A12175, C14090, A20559, A23134].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanothermococcus okinawensis
JCM number: 11175 <-- K. Takai IH1.
Source: Deep-sea hydrothermal vent chimney at the Iheya Ridge, in the Okinawa Trough, Japan [5263].
Biochemistry/Physiology: [5263].
G+C (mol%): 33.5 (HPLC) [5263].
DNA-DNA relatedness: [5263].
Phylogeny: 16S rRNA gene (AB057722) [5263].
Other taxonomic data: Polyamine [5431].
Genome sequence: CP002792, CP002793.
  
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Publication(s) using this strain [A07262, A13145, A16556].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natrialba aegyptia
JCM number: 11194 <-- DSM 13077 <-- B. H. A. Rehm <-- F. F. Hezayen 40.
Source: Hypersaline soil close to Aswan, Egypt [4964].
Biochemistry/Physiology: [4964].
Polar lipid: [4964].
G+C (mol%): 61.5 (HPLC) [4964].
DNA-DNA relatedness: [4964].
Phylogeny: 16S rRNA gene (AF251941) [4964].
Other taxonomic data: Polyamine [5431].
Genome sequence: AOIP00000000 [12471].
Production: Extracellular poly(glutamic acid) [4964].
Publication(s) using this strain [A07100, A10175].
Patent publication(s) using this strain [JP2007-314434A, JP2008-120725A, JP2009-120585A, JP2009-079027A, JP2009-079026A, JP2009-079025A, JP2009-057349A, JP2009-057348A, JP2009-057347A, JP2011-092213A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Vulcanisaeta distributa
JCM number: 11212 <-- T. Itoh IC-017.
Source: Hot spring water, Ohwakudani, Kanagawa, Japan [5264].
Biochemistry/Physiology: [5264].
G+C (mol%): 45.4 (HPLC) [5264].
DNA-DNA relatedness: [5264].
Phylogeny: 16S rRNA gene (AB063630) [5264].
Other taxonomic data: Polyamine [5609].
Genome sequence: CP002100 [8376].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08462.
  
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Publication(s) using this strain [A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Vulcanisaeta souniana
JCM number: 11219 <-- T. Itoh IC-059.
Source: Hot spring water, Sounzan, Kanagawa, Japan [5264].
Biochemistry/Physiology: [5264].
G+C (mol%): 44.9 (HPLC) [5264].
DNA-DNA relatedness: [5264].
Phylogeny: 16S rRNA gene (AB063645) [5264].
Other taxonomic data: Polyamine [5609].
Genome sequence: BBBK00000000; BMNM01000000; AP026830 [14323].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12572.
  
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Publication(s) using this strain [A09212, C23428].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermaerobacter nagasakiensis
JCM number: 11223 <-- T. Nunoura TS1a.
Source: Shallow marine hydrothermal vent in Tachibana Bay, Nagasaki, Japan [5182].
Biochemistry/Physiology: [5182].
G+C (mol%): 69 (HPLC) [5182].
DNA-DNA relatedness: [5182].
Phylogeny: 16S rRNA gene (AB061441) [5182].
Other taxonomic data: Polyamine [5950].
Publication(s) using this strain [A04179, B06075, B09167, A11258, A15500].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Marinitoga piezophila
JCM number: 11233 <-- J.-L. Birrien KA3.
Source: Hydrothermal vent chimney, the East-Pacific Ridge (13° N), at a depth of 2,630 m [5265].
Biochemistry/Physiology: [5265].
G+C (mol%): 29 (Tm) [5265].
Phylogeny: 16S rRNA gene (AF326121) [5265].
Other taxonomic data: Polyamine [5950].
Genome sequence: CP003257, CP003258 (plasmid) [12514].
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Petrotoga olearia
JCM number: 11234 <-- S. L'Haridon SL24.
Source: Deep, continental oil reservoir in Western Siberia, Russia [5301].
Biochemistry/Physiology: [5301].
G+C (mol%): 35 (Tm) [5301].
DNA-DNA relatedness: [5301].
Phylogeny: 16S rRNA gene (AJ311703) [5301].
Other taxonomic data: Polyamine [5950].
Genome sequence: AZRL00000000, REFG00000000.
  
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Publication(s) using this strain [A04179, A14100].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Petrotoga sibirica
JCM number: 11235 <-- S. L'Haridon SL25.
Source: Deep, continental oil reservoir in Western Siberia, Russia [5301].
Biochemistry/Physiology: [5301].
G+C (mol%): 33 (Tm) [5301].
DNA-DNA relatedness: [5301].
Phylogeny: 16S rRNA gene (AJ311702) [5301].
Other taxonomic data: Polyamine [5950].
Genome sequence: JAHC00000000, SODZ00000000.
  
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Publication(s) using this strain [A04179, A14100].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanosarcina baltica
JCM number: 11281 <-- M. Thomm GS1-A.
Source: Sediment in the Gotland Deep of the Baltic Sea [5185].
Biochemistry/Physiology: [5185].
Phylogeny: 16S rRNA gene (AJ238648) [5185].
Other taxonomic data: Polyamine [5431].
  
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Publication(s) using this strain [A07262].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haliangium ochraceum
JCM number: 11303 <-- R. Fudou SMP-2.
Source: Dry Laminariales seaweed sample collected from a sandy beach (Aburatsubo-wan) of the Miura Peninsula, Japan [4989].
Morphology: [4989].
Biochemistry/Physiology: [4989,5289].
Fatty acid: [5289].
Quinone: MK-8 [5289].
G+C (mol%): 67 (HPLC) [5289].
Phylogeny: 16S rRNA gene (AB016470).
Other taxonomic data: Polyamine [5806].
Genome sequence: CP001804 [8188].
Publication(s) using this strain [A04202].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Haliangium tepidum
JCM number: 11304 <-- R. Fudou SMP-10.
Source: Sea grass sample collected from a sandy beach on the Miura Peninsula, Kanagawa, Japan [5289].
Morphology: [5289].
Biochemistry/Physiology: [5289].
Fatty acid: [5289].
Quinone: MK-8 [5289].
G+C (mol%): 69 (HPLC) [5289].
Phylogeny: 16S rRNA gene (AB062751) [5289].
Other taxonomic data: Polyamine [5806].
  
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Publication(s) using this strain [A04202].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acidilobus aceticus
JCM number: 11320 <-- DSM 11585 <-- E. A. Bonch-Osmolovskaya 1904.
Source: Acidic hot spring of the Moutnovski volcano, Kamchatka, Russia [5014].
Biochemistry/Physiology: [5014].
G+C (mol%): 53.8 [5014].
Phylogeny: 16S rRNA gene (AF191225) [5014].
Other taxonomic data: Polyamine [5609].
  
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Publication(s) using this strain [A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyrobaculum arsenaticum
JCM number: 11321 <-- DSM 13514 <-- K. O. Stetter and R. Huber PZ6*.
Source: Hot spring at Pisciarelli Solfatara, Naples, Italy [5015].
Biochemistry/Physiology: [5015].
G+C (mol%): 58.3 (HPLC) [5015].
Phylogeny: 16S rRNA gene (AJ277124) [5015].
Other taxonomic data: Polyamine [5609].
Genome sequence: CP000660.
  
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Publication(s) using this strain [A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saccharolobus solfataricus
JCM number: 11322 <-- DSM 1617 <-- W. Zillig P2.
Source: Volcanic hot spring at Pisciarelli Solfatara, Italy [3319].
Biochemistry/Physiology: [3319,3679].
Other taxonomic data: S-layer component profile [3679]; Polyamine [5609].
Genome sequence: AE006641 [5016,5017].
More information: DNA-dependent RNA polymerase [3319].
  
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Publication(s) using this strain [A04014, A06021, A09212, A12321, A13450].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermocrinis albus
JCM number: 11386 <-- W. Eder and K. O. Stetter HI 11/12.
Source: Grayish filaments collected from a hot streamlet in Hveragerthi, Iceland [5291].
Biochemistry/Physiology: [5291].
G+C (mol%): 49.6 (HPLC) [5291].
Phylogeny: 16S rRNA gene (AJ278895) [5291].
Other taxonomic data: Polyamine [5950].
Genome sequence: CP001931 [8332].
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermovibrio ruber
JCM number: 11468 <-- H. Huber and K. O. Stetter ED11/3LLK.
Source: Sandy sediments from the beach off Lihir Island, Papua New Guinea [5304].
Biochemistry/Physiology: [5304].
G+C (mol%): 45 (Tm), 47 (HPLC) [5304].
Phylogeny: 16S rRNA gene (AJ316619) [5304].
Other taxonomic data: Polyamine [5950].
  
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Publication(s) using this strain [A04179, A08174].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Deferribacter desulfuricans
JCM number: 11476 <-- K. Takai SSM1.
Source: Deep-sea hydrothermal vent chimney at the Suiyo Seamount in the Izu-Bonin Arc, Japan [5456].
Biochemistry/Physiology: [5456].
Fatty acid: a-C15:0, i-C15:0, a-C17:0, i-C18:0.
G+C (mol%): 38.6 (HPLC) [5456].
DNA-DNA relatedness: [5456].
Phylogeny: 16S rRNA gene (AB086060) [5456].
Other taxonomic data: Polyamine [6389].
Genome sequence: AP011529 [12502].
  
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Publication(s) using this strain [A09250].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sulfurihydrogenibium subterraneum
JCM number: 11477 <-- K. Takai HGMK1.
Source: Subsurface hot aquifer water in the Hishikari gold mine, Kagoshima, Japan [5455].
Biochemistry/Physiology: [5455].
Fatty acid: n-C18:1, n-C18:0, n-C20:1 [5455].
G+C (mol%): 31.3 (HPLC) [5455].
Phylogeny: 16S rRNA gene (AB071324) [5455].
Other taxonomic data: Polyamine [5950].
Genome sequence: JHUV00000000.
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sporotomaculum syntrophicum
JCM number: 11495 <-- Y.-L. Qiu strain FB.
Source: Anaerobic sludge used to treat wastewaters from the manufacture of terephthalic acid [5422].
Biochemistry/Physiology: [5422].
Fatty acid: C16:1, C16:0 [5422].
Quinone: MK-7.
G+C (mol%): 46.8 (HPLC) [5422].
Phylogeny: 16S rRNA gene (AB076610) [5422].
Other taxonomic data: Polyamine [5950].
Genome sequence: LSRS010000000.
More information: In Ref. [5422], the JCM accession number was incorrectly cited as JCM 11475.
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Marinithermus hydrothermalis
JCM number: 11576 <-- S. Nakagawa T1.
Source: Deep-sea hydrothermal vent chimney at Suiyo Seamount in the Izu-Bonin Arc, Japan [5402].
Biochemistry/Physiology: [5402].
Fatty acid: i-C15:0, i-C17:0, C16:0, a-C15:0, 3OH-C11:0 [5402].
Quinone: MK-8 [5402].
G+C (mol%): 68.6 (HPLC) [5402].
Phylogeny: 16S rRNA gene (AB079382) [5402].
Other taxonomic data: Polyamine [5950].
Genome sequence: CP002630 [9021].
Publication(s) using this strain [A04179].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Plesiocystis pacifica
JCM number: 11591 <-- T. Iizuka SIR-1.
Source: Semi-dried sample of sea grass, Iriomote-jima Island, Japan [5408].
Morphology: [5408].
Biochemistry/Physiology: [5408].
Fatty acid: [5408].
Quinone: MK-8(H2) [5408].
G+C (mol%): 69.3 (HPLC) [5408].
Phylogeny: 16S rRNA gene (AB083432) [5408].
Other taxonomic data: Polyamine [5806].
Genome sequence: ABCS000000000.
Publication(s) using this strain [A04202].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermodiscus maritimus
JCM number: 11597 <-- K. O. Stetter S2.
Source: Hot marine sediment at the beach of Vulcano Island, Italy [5403].
Biochemistry/Physiology: [5403].
G+C (mol%): 49 (Tm, HPLC) [5403].
Phylogeny: 16S rRNA gene (X99554) [5403].
Other taxonomic data: Polyamine [5609].
  
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Publication(s) using this strain [A06021, A09212].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Persephonella hydrogeniphila
JCM number: 11663 <-- S. Nakagawa 29W.
Source: Deep-sea hydrothermal vent chimney at the Suiyo Seamount in the Izu-Bonin Arc, Japan [5457].
Biochemistry/Physiology: [5457].
Fatty acid: n-C20:1, n-C18:0, n-C18:1, n-C16:0 [5457].
G+C (mol%): 37.3 (HPLC) [5457].
DNA-DNA relatedness: [5457].
Phylogeny: 16S rRNA gene (AB086419) [5457].
Other taxonomic data: Polyamine [5950].
Genome sequence: OBEI00000000.
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Falsarthrobacter nasiphocae
JCM number: 11677 <-- CCUG 42953 <-- M. D. Collins <-- L. Hoyles <-- G. Foster M597/99/10.
Source: Nasal swab from a common seal (Phoca vitulina) [5250].
Biochemistry/Physiology: [5250].
Cell wall: Type A3α [L-Lys-L-Ala2-Gly2-3-L-Ala (Gly)] [5250].
Fatty acid: i-C15:0, i-C16:0, a-C17:0 [12031].
Quinone: MK-9(H2), MK-8(H2) [5250], MK-9(H2), MK-8(H2), MK-7(H2) [12031].
Polar lipid: DPG, PG, DMG, PL, PGL, APGL [12031].
G+C (mol%): 65 [5250].
Phylogeny: 16S rRNA gene (AJ292364) [5250].
Other taxonomic data: Polyamine (spermidine, spermine) [12031].
Taxonomy: [12031].
Genome sequence: BAAAIU010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Enhygromyxa salina
JCM number: 11769 <-- T. Iizuka SHK-1.
Source: Wet black mud at a shore facing Saroma-ko lagoon, Japan [5478].
Morphology: [5478].
Biochemistry/Physiology: [5478].
Fatty acid: [5478].
Quinone: MK-7 [5478].
G+C (mol%): 66.7 (HPLC) [5478].
Phylogeny: 16S rRNA gene (AB097590) [5478].
Other taxonomic data: Polyamine [5806].
Publication(s) using this strain [A04202].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermococcus sp.
JCM number: 11816 <-- T. Maruyama KS-1.
Source: Submarine hydrothermal sediments at an inlet of Kodakara-jima Island, Kagoshima, Japan [5293].
Biochemistry/Physiology: [5293].
G+C (mol%): 55.0 (HPLC) [5293].
Other taxonomic data: Polyamine [5609].
More information: Chaperonin [5294,5295]; FKBP-type peptidyl-prolyl cis-trans isomerase [5296].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12607.
Publication(s) using this strain [A05226, A07262].
Patent publication(s) using this strain [JP2007-187647A].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermodesulfatator indicus
JCM number: 11887 <-- H. Moussard CIR29812.
Source: Deep-sea hydrothermal vent site at the Kairei vent field on the Central Indian Ridge [5619].
Biochemistry/Physiology: [5619].
Fatty acid: [5619].
Quinone: MK-7 [5619].
Polar lipid: [5619].
G+C (mol%): 46 (HPLC) [5619].
Phylogeny: 16S rRNA gene (AF393376) [5619].
Other taxonomic data: Polyamine [5950].
Genome sequence: CP002683 [9113].
  
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Publication(s) using this strain [C04121, A04179, A18541].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Deferribacter abyssi
JCM number: 11955 <-- M. Miroshnichenko strain JR.
Source: Rainbow hydrothermal vent field of the Mid-Atlantic Ridge [5540].
Biochemistry/Physiology: [5540].
G+C (mol%): 30.8 [5540].
Phylogeny: 16S rRNA gene (AJ515882) [5540].
Other taxonomic data: Polyamine [6389].
Publication(s) using this strain [A09250].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Vulcanithermus mediatlanticus
JCM number: 11956 <-- M. Miroshnichenko strain TR.
Source: Deep-sea hydrothermal chimney at the Rainbow vent field on the Mid-Atlantic Ridge [5489].
Biochemistry/Physiology: [5489].
Fatty acid: i-C15:0, i-C17:0, branched cyclopentane-ring-containing C17:0, i-C17:1 [5489].
Quinone: MK-8 [5489].
Polar lipid: [5489].
G+C (mol%): 68.4 [5489].
Phylogeny: 16S rRNA gene (AJ507298) [5489].
Other taxonomic data: Polyamine [5950].
  
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Publication(s) using this strain [A04179].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Balnearium lithotrophicum
JCM number: 11970 <-- K. Takai 17S.
Source: Deep-sea hydrothermal vent chimney at the Suiyo Seamount in the Izu-Bonin Arc, Japan [5585].
Biochemistry/Physiology: [5585].
Fatty acid: [5585].
G+C (mol%): 34.6 (HPLC) [5585].
Phylogeny: 16S rRNA gene (AB105049) [5585].
Other taxonomic data: Polyamine [5950].
Genome sequence: FXTM01000000.
Publication(s) using this strain [A07246, A08174].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermovibrio ammonificans
JCM number: 12110 <-- C. Vetriani HB-1.
Source: Walls of an active deep-sea hydrothermal vent chimney on the East Pacific Rise [5618].
Biochemistry/Physiology: [5618].
G+C (mol%): 54.6 (HPLC) [5618].
DNA-DNA relatedness: [5618].
Phylogeny: 16S rRNA gene (AY263403) [5618].
Other taxonomic data: Polyamine [5950].
Genome sequence: CP002444 [9160].
  
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Publication(s) using this strain [C04099, A04179, A08174, C12447, A18541].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Anoxybacteroides voinovskiensis
JCM number: 12111 <-- I. Yumoto TH13.
Source: Water sample from the Voinovskie Hot Springs in Kamchatka, Russia [5741].
Biochemistry/Physiology: [5741].
Fatty acid: [5741].
G+C (mol%): 43.9 (HPLC) [5741].
DNA-DNA relatedness: [5741].
Phylogeny: 16S rRNA gene (AB110008) [5741].
Other taxonomic data: Polyamine [5950].
Taxonomy: Proposal of transfer from Anoxybacillus to Anoxybacteroides as Anoxybacteroides voinovskiensis [14577].
Genome sequence: BMNP01000000.
Publication(s) using this strain [C04088, A04179].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Georgenia muralis
JCM number: 12241 <-- CCM 4963 <-- H.-J. Busse <-- P. Altenburger 1A-C.
Source: Medieval wall painting in the church of St. Georgen, Styria, Austria [5220].
Biochemistry/Physiology: [5220].
Cell wall: Ala, Glu, Lys (2 : 2 : 1) (type A4α) [5220].
Fatty acid: [5220].
Quinone: MK-8(H4), MK-7(H4) [5220].
Polar lipid: DPG, PG, PIM [5220].
G+C (mol%): 69.7 (HPLC) [5220].
DNA-DNA relatedness: [5220].
Phylogeny: 16S rRNA gene (X94155) [5220].
DNA typing: Genomic fingerprinting [5220].
Other taxonomic data: Polyamine [5220].
Genome sequence: RKRA00000000.
Publication(s) using this strain [A12190, B23267].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudonovosphingobium resinovorum
JCM number: 12332 <-- NBRC 16058 <-- IFO 16058 <-- DSM 10700 <-- L. J. Nohynek KF1.
Source: Fluidized reactor [4392].
Biochemistry/Physiology: [5481,5482].
Numerical taxonomy: [4392].
Fatty acid: [4392,5481,5482].
Quinone: Q-10 [4392].
G+C (mol%): 66±1 (HPLC) [4392].
DNA-DNA relatedness: [4392].
Phylogeny: 16S rRNA gene (X94102) [4392], 16S rRNA gene (LC507452).
Other taxonomic data: Polyamine [4392].
Taxonomy: [5481,5482,7046].
More information: Type strain of Sphingomonas subarctica and Novosphingobium subarcticum [4392]; Degrades 2,4,6-tri- and 2,3,4,6-tetrachlorophenols [4392].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Marinilactibacillus piezotolerans
JCM number: 12337 <-- L. Toffin LT20.
Source: Deep sub-seafloor sediment core collected at Nankai Trough, off the coast of Japan [5890,8906].
Biochemistry/Physiology: [5890].
Fatty acid: [5890].
Polar lipid: [5890].
G+C (mol%): 42.0 (HPLC) [5890].
DNA-DNA relatedness: [5890].
Phylogeny: 16S rRNA gene (AY485792) [5890].
Other taxonomic data: Polyamine [6389].
Genome sequence: FOSJ01000000.
Publication(s) using this strain [C05132, A09037, A11046, A11180].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Agrococcus citreus
JCM number: 12398 <-- CIP 106287 <-- H.-J. Busse D-1/1a.
Source: Medieval wall painting of the chapel of the castle Herberstein, Styria, Austria [5643].
Biochemistry/Physiology: [5643].
Cell wall: Ala, Gly, A2bu, Asp, Glu (3.6 : 2.1 : 0.8 : 0.9 : 1.0) [5643].
Fatty acid: [5643].
Quinone: MK-11, MK-12 [5643].
Polar lipid: DPG, PG [5643].
G+C (mol%): 74 (HPLC) [5643].
DNA-DNA relatedness: [5643].
Phylogeny: 16S rRNA gene (AB279547, AJ012826) [5643].
Other taxonomic data: Polyamine (spermine) [5643].
Genome sequence: BAAAKK010000000.
Publication(s) using this strain [A10287].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leptotrichia buccalis
JCM number: 12969 <-- DSM 1135 <-- NCTC 10249 <-- A. Howell, Jr. C-1013-b.
Source: Supragingival calculus.
Phylogeny: 16S rRNA gene (AB818949, X90831).
Genome sequence: CP001685 [8226].
More information: Polyamine [13792].
  
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Publication(s) using this strain [A08289, A10314, A19174].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fusobacterium periodonticum
JCM number: 12991 <-- CCUG 14345 <-- J. Slots <-- ATCC 33693 <-- J. Slots EK1-15.
Biosafety level 2.
Source: Advanced periodontitis lesions of patient with insulin-dependent diabetes mellitus [5887].
Biochemistry/Physiology: [5887].
Fatty acid: [5887].
G+C (mol%): 28 (Tm) [5887].
DNA-DNA relatedness: [5887].
Phylogeny: 16S rRNA gene (AB910749, GQ301043, X55405) [3166].
Genome sequence: ACJY00000000.
More information: Polyamine [13792].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD20031.
  
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Publication(s) using this strain [A21438, A22503, A23396, A24394].
Patent publication(s) using this strain [2022-135978].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mycolicibacterium murale
JCM number: 13392 <-- CCUG 39728 <-- M. Salkinoja-Salonen MA112/96.
Source: Water-damaged indoor building material of a children's day care center, Finland [6111].
Biochemistry/Physiology: [6111].
Cell wall: meso-A2pm [6111].
Fatty acid: [6111].
Quinone: MK-9(H2) (90%), MK-8(H2) (10%) [6111].
Polar lipid: PE, PI, PIM, DPG [6111].
G+C (mol%): 72.9 (HPLC) [6111].
Phylogeny: 16S rRNA gene (AB537171, HM770863).
DNA typing: Ribotyping [6111].
Other taxonomic data: Mycolic acid (C60-90) [6111]; Polyamine [6111].
Taxonomy: [12055].
Genome sequence: BAAAMC010000000, BLKT00000000.
Publication(s) using this strain [A13538, A18115, A19141, A21353].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Calditerricola satsumensis
JCM number: 14719 <-- T. Oshima YMO81.
Source: High-temperature compost in the city of Kagoshima, Japan [8529].
Biochemistry/Physiology: [8529].
Fatty acid: [8529].
Polar lipid: [8529].
G+C (mol%): 70 (HPLC) [8529].
DNA-DNA relatedness: [8529].
Phylogeny: 16S rRNA gene (AB250968) [8529].
Other taxonomic data: Polyamine [8529].
Genome sequence: BBCF00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12594.
Publication(s) using this strain [B11200, A24363].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Calditerricola yamamurae
JCM number: 14720 <-- T. Oshima YMO722.
Source: High-temperature compost in the city of Kagoshima, Japan [8529].
Biochemistry/Physiology: [8529].
Fatty acid: [8529].
Polar lipid: [8529].
G+C (mol%): 64 (HPLC) [8529].
DNA-DNA relatedness: [8529].
Phylogeny: 16S rRNA gene (AB308475) [8529].
Other taxonomic data: Polyamine [8529].
  
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Publication(s) using this strain [B11200, A24363].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Citricoccus zhacaiensis
JCM number: 15136 <-- X.-W. Xu FS24.
Source: Water-sludge mixture of a bioreactor treating saline wastewater from pickled vegetable production [7952].
Biochemistry/Physiology: [7952].
Cell wall: Ala, Gly, Glu, Lys (1.0 : 0.5 : 1.3 : 1.0) [7952].
Fatty acid: [7952].
Quinone: MK-9(H2), MK-7(H2), MK-8(H2) [7952].
Polar lipid: DPG, PG, PI [7952].
G+C (mol%): 66.0 (HPLC) [7952].
DNA-DNA relatedness: [7952].
Phylogeny: 16S rRNA gene (EU305672) [7952].
Other taxonomic data: Polyamine (spermidine) [7952].
Genome sequence: BAAAOU010000000, BMLQ00000000.
Publication(s) using this strain [C10044].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyramidobacter piscolens
JCM number: 16336 <-- CCUG 55836 <-- J. Downes W5455.
Source: Human oral cavity [7671].
Biochemistry/Physiology: [7671].
Fatty acid: [7671].
G+C (mol%): 59 (HPLC) [7671].
DNA-DNA relatedness: [7671].
Phylogeny: 16S rRNA gene (AB565480, EU309492), 23S rRNA gene (EU379932), secA (DU723069) [7671].
Genome sequence: ADFP00000000.
More information: Polyamine [13792].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Zuelzera stenostrepta
JCM number: 16534 <-- DSM 2028 <-- E. Canal-Parola strain Z1.
Source: Mud of a fresh-water pond.
Phylogeny: 16S rRNA gene (AB541984, FR733664), concatenated alignment of 120 single copy genes [13765].
Taxonomy: [9615,9616].
More information: Polyamine [13792].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium lubricantis
JCM number: 16607 <-- CCM 7546 <-- P. Kämpfer KSS-3Se.
Source: Coolant lubricant, Giessen, Germany [7887].
Biochemistry/Physiology: [7887].
Fatty acid: [7887].
Quinone: MK-9(H2), MK-8(H2), MK-7(H2) [7887].
Polar lipid: PG, DPG, PI [7887].
G+C (mol%): 56.8 (genome sequence) [12227].
DNA-DNA relatedness: [7887].
Phylogeny: 16S rRNA gene (FM173119) [7887].
Other taxonomic data: Polyamine [7887].
Genome sequence: ARAV00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingomonas polyaromaticivorans
JCM number: 16711 <-- Y. Luo B2-7.
Source: Water sample from Botan Oil Port in Xiamen, China.
Biochemistry/Physiology: [9104].
Fatty acid: [9104].
Quinone: Q-10 [9104].
Polar lipid: PE, PG, PC, SGL [9104].
G+C (mol%): 61.8 (HPLC) [9104].
Phylogeny: 16S rRNA gene (EF467848) [9104].
Other taxonomic data: Polyamine (sym-homospermidine) [9104].
Publication(s) using this strain [C12121, A17429].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudoleptotrichia goodfellowii
JCM number: 16774 <-- CCUG 32286 <-- R. Hammann LB 57.
Source: Human blood, Heidelberg, Germany [7934].
Biochemistry/Physiology: [7934].
Fatty acid: [7934].
DNA-DNA relatedness: [7934].
Phylogeny: 16S rRNA gene (AB558169, AY029807) [7934].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances, MALDI-TOF MS [13212].
Genome sequence: AP019822, AZXW00000000.
More information: Polyamine [13792].
  
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Publication(s) using this strain [A19174, A22522].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leptotrichia hofstadii
JCM number: 16775 <-- CCUG 47504 <-- I. Olsen LB 23 <-- T. Hofstad.
Source: Saliva of a healthy person [7934].
Biochemistry/Physiology: [7934].
Fatty acid: [7934].
DNA-DNA relatedness: [7934].
Phylogeny: 16S rRNA gene (AB558170, AY029803) [7934].
Genome sequence: AP019823, AP019824 (plasmid pJCM16775">plasmid pJCM16775">plasmid pJCM16775">plasmid pJCM16775-1), AP019825 (plasmid pJCM16775">plasmid pJCM16775">plasmid pJCM16775">plasmid pJCM16775-2), AP019826 (plasmid pJCM16775">plasmid pJCM16775">plasmid pJCM16775">plasmid pJCM16775-3), AUAY00000000.
More information: Polyamine [13792].
  
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Publication(s) using this strain [A19174].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leptotrichia shahii
JCM number: 16776 <-- CCUG 47503 <-- I. Olsen LB 37 <-- W. E. C. Moore VPI N06A-34.
Source: Patient with gingivitis [7934].
Biochemistry/Physiology: [7934].
Fatty acid: [7934].
DNA-DNA relatedness: [7934].
Phylogeny: 16S rRNA gene (AB558171, AY029806) [7934].
Genome sequence: AP019827, AP019828 (plasmid JCM16776p1), ARDD00000000.
More information: Polyamine [13792].
  
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Publication(s) using this strain [A19174].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leptotrichia wadei
JCM number: 16777 <-- CCUG 47505 <-- I. Olsen LB 16 <-- T. Hofstad.
Source: Saliva of a healthy person [7934].
Biochemistry/Physiology: [7934].
Fatty acid: [7934].
DNA-DNA relatedness: [7934].
Phylogeny: 16S rRNA gene (AB588021, AY029802).
Genome sequence: AP019829, AP019830 (plasmid pJCM16777-1), ARDS00000000.
More information: Polyamine [13792].
  
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Publication(s) using this strain [A19174, A23482].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fretibacterium fastidiosum
JCM number: 16858 <-- S. R. Vartoukian SGP1.

Source: Subgingival plaque from a human with periodontitis [9353].
Biochemistry/Physiology: [9353].
Fatty acid: [9353].
G+C (mol%): 63 (genome sequence) [9353].
Phylogeny: 16S rRNA gene (GQ149247) [9353].
Genome sequence: FP929056, OZ209244 [14789].
More information: Polyamine [13792].
  
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Publication(s) using this strain [B13323, C13384].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Methanococcus voltae
JCM number: 16865 <-- W. B. Whitman A3.
Source: Intertidal sediment, inner harbor of Tampa Bay, FL, USA [4162].
Biochemistry/Physiology: [4162,4164].
Serology: [4164].
G+C (mol%): 29.3 (HPLC) [4162].
DNA-DNA relatedness: [4164].
Phylogeny: 16S rRNA (U38488).
Other taxonomic data: Whole-cell protein profile [4164]; Polyamine [5431].
Genome sequence: CP002057.
More information: Viruslike particle [4163].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12783.
  
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Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pleomorphochaeta multiformis
JCM number: 17281 <-- M. Miyazaki MO-SPC2.
Source: Marine subsurface sediments [10276].
Biochemistry/Physiology: [10276,11473].
Fatty acid: [10276].
Polar lipid: PGLs, PLs, GLs [10276].
G+C (mol%): 32.3 (HPLC) [10276].
Phylogeny: 16S rRNA gene (AB598280) [10276].
Taxonomy: [11473].
More information: Polyamine [13792].
  
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Publication(s) using this strain [C14382].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fusobacterium canifelinum
JCM number: 17464 <-- KCTC 5838 <-- J. K. Kook <-- CCUG 49733 <-- G. Conrads RMA 1036.
Biosafety level 2.
Source: Purulent dog-bite wound in a human patient [8410].
Biochemistry/Physiology: [8410].
G+C (mol%): 26-28 (Tm) [8410].
DNA-DNA relatedness: [8410].
Phylogeny: 16S rRNA gene (AB616132, AY162221) [8410], ITS (AY125473) [8410].
Taxonomy: [8411].
More information: Polyamine [13792].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD20028.
  
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Publication(s) using this strain [A22503].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fusobacterium simiae
JCM number: 17465 <-- KCTC 5548 <-- J. K. Kook <-- CCUG 16798 <-- CCM 3660 <-- J. Slots 7511 R2-13.
Source: Monkey dental plaque [8409].
Biochemistry/Physiology: [8409].
G+C (mol%): 28 (Tm) [8409].
DNA-DNA relatedness: [8409].
Phylogeny: 16S rRNA gene (AB616133).
Genome sequence: JAOXXL010000000.
More information: Polyamine [13792].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD20029.
  
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Publication(s) using this strain [A22503].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Falsiroseomonas riguiloci
JCM number: 17520 <-- C. N. Seong 03SU10-P.
Source: Freshwater from Woopo wetland in Gyeongnam Province, Republic of Korea [9248].
Biochemistry/Physiology: [9248].
Fatty acid: [9248].
Quinone: Q-10 [9248].
Polar lipid: PE, PC, AL, DPG, PG [9248].
G+C (mol%): 68 (Tm) [9248].
Phylogeny: 16S rRNA gene (HQ436503) [9248,13603].
Other taxonomic data: Polyamine (Spermidine, putrescine and 1,3-diaminopropane) [9248].
Publication(s) using this strain [C12233, A23200].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingomonas limnosediminicola
JCM number: 17543 <-- C. N. Seong 03SUJ6.
Source: Freshwater sediment of Juam reservoir, Republic of Korea [11699].
Morphology: [11699].
Biochemistry/Physiology: [11699].
Chemotaxonomy: [11699].
DNA-DNA relatedness: [11699].
Phylogeny: 16S rRNA gene (HQ436498) [11699].
Other taxonomic data: Polyamine (sym-homospermidine) [11699].
Genome sequence: BAABBM010000000.
Publication(s) using this strain [C17272].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chelativorans composti
JCM number: 17863 <-- S. Yabe Nis3.
Source: Compost [9247].
Biochemistry/Physiology: [9247,14359].
Fatty acid: [9247,14359].
Quinone: Q-10 [9247].
Polar lipid: PC, PG, PE, OH-PE, PI, PME, GL, NPL [9247]; PME, DPG, PG, PC, GLs, AL, PL, Ls [14359].
G+C (mol%): 63.4 (HPLC) [9247].
Phylogeny: 16S rRNA gene (AB563785) [9247,14359], recA (KP113703) [14359].
Other taxonomic data: Polyamine (sym-homospermidine, putrescine, spermidine) [14359].
Genome sequence: BAABGS010000000.
Publication(s) using this strain [C12229].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Natronobacterium gregoryi
JCM number: 17874 <-- NCIMB 2189 <-- W. D. Grant <-- B. J. Tindall SP2.
Source: Lake Magadi, Kenya [3293].
Morphology: [3293].
Biochemistry/Physiology: [3293,3367].
Quinone: MK-8, MK-8(H2) [2070], MMK-8, MMK-8(H2), DMK-8, DMK-8(H2) [3622].
Polar lipid: [3293,3623,3625,3627].
G+C (mol%): 65.0 (Bd) [3293].
DNA-DNA relatedness: [3367].
Phylogeny: 16S rRNA gene (D87970) [4247].
Other taxonomic data: Polyamine [3757,3796].
Genome sequence: AOIC00000000 [12471], CP003377.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dietzia aerolata
JCM number: 17966 <-- CCM 7659 <-- P. Kämpfer Sj14a.
Source: Air of a duck barn [8782].
Biochemistry/Physiology: [8782].
Fatty acid: n-C16:0, n-C17:0, n-C18:1, 10Me-C18:0 [8782].
Quinone: MK-8(H2) [8782].
Polar lipid: DPG, PG, PI [8782].
DNA-DNA relatedness: [8782].
Phylogeny: 16S rRNA gene (FM995533) [8782].
Other taxonomic data: Polyamine (spermine, spermidine) [8782].
Genome sequence: JAALDM00000000.
Publication(s) using this strain [A21186].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermoanaerobaculum aquaticum
JCM number: 18256 <-- P. A. Lawson MP-01.
Source: Freshwater hot spring, the Hale House Spring at Hot Springs National Park, Hot Springs, AR, USA [9715].
Biochemistry/Physiology: [9715].
Fatty acid: a-C15:0, i-C15:0, i-C16:0, n-C16:0, a-C17:0, i-C17:0, i-C18:0 [9715].
Quinone: MK-10, MK-9, MK-11 [9715].
Polar lipid: DPG, PG, PE [9715].
G+C (mol%): 62.7 (HPLC) [9715].
Phylogeny: 16S rRNA gene (JX420244) [9715,12492].
Other taxonomic data: Polyamine (sym-homospermidine, spermine, putrescine) [9715].
Genome sequence: JMFG00000000 [12529].
  
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Publication(s) using this strain [C13349].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paenibacillus vulneris
JCM number: 18268 <-- CCUG 53270 <-- K. Öystese; Univ. Hosp. of Tromsö, Norway.
Source: Necrotic wound of a 35-year-old man in Tromsø, Norway [9403].
Biochemistry/Physiology: [9403].
Fatty acid: [9403].
Quinone: MK-7, MK-6 [9403].
Polar lipid: DPG, PME, PE, PG [9403].
DNA-DNA relatedness: [9403].
Phylogeny: 16S rRNA gene (HE649498) [9403].
Other taxonomic data: Polyamine (spermidine) [9403].
Genome sequence: BAABJG010000000.
Publication(s) using this strain [C13422, B15375, A17244, A20216].
Patent publication(s) using this strain [CN104877942 A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudosphingomonas lutea
JCM number: 18309 <-- C. N. Seong JS5.
Source: Freshwater of Juam reservoir, Republic of Korea [11417].
Morphology: [11417].
Biochemistry/Physiology: [11417].
Fatty acid: [11417].
Quinone: Q-10 [11417].
Polar lipid: Sphingolipid, DPG, PC, PE, PG, etc. [11417].
G+C (mol%): 64.9 (Tm) [11417]; 65.3 (genome sequence) [14823].
DNA-DNA relatedness: [11417,14823].
Phylogeny: 16S rRNA gene [11417,14823]; Phylogenomic analysis [14823].
Other taxonomic data: Polyamine (sym-homospermidine) [11417].
Genome sequence: CP060718, BAABJT010000000.
Publication(s) using this strain [C16404].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leptospira idonii
JCM number: 18486 <-- M. Saito strain Eri-1.
Biosafety level 2.
Source: Environmental water sample on the campus of Kyushu University, Fukuoka, Japan [9546].
Biochemistry/Physiology: [9546].
G+C (mol%): 42.5 (HPLC) [9546].
DNA-DNA relatedness: [9546].
Phylogeny: 16S rRNA gene (AB721966) [9546].
More information: Polyamine [13792].
Publication(s) using this strain [C13255].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Chryseobacterium yeoncheonense"
JCM number: 18516 <-- D.-C. Yang and Y.-J. Kim DCY67.
Source: Rhizosphere soil of a ginseng field, Yeon-cheon Province, Republic of Korea [9707].
Biochemistry/Physiology: [9707].
Fatty acid: [9707].
Quinone: MK-6, MK-7 [9707].
Polar lipid: PE [9707].
G+C (mol%): 36.1 (HPLC) [9707].
DNA-DNA relatedness: [9707].
Phylogeny: 16S rRNA gene (JX141782) [9707].
Other taxonomic data: Polyamine (spermidine) [9707].
More information: Microbial conversion of ginsenoside Rb1 to compound K [9707].
Publication(s) using this strain [C13095, A16032].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingomicrobium marinum
JCM number: 18554 <-- C.-C. Young CC-AMZ-30M.

Source: Surface seawater (10 cm in depth) collected near Taichung harbour, Taiwan [9809].
Biochemistry/Physiology: [9809].
Fatty acid: [9809].
Quinone: Q-10 [9809].
Polar lipid: DPG, PG, PE, SGL, GLs, AL [9809].
G+C (mol%): 64.2 (HPLC) [9809].
Phylogeny: 16S rRNA gene (JX235672) [9809].
Other taxonomic data: Polyamine (spermidine, triamine sym-homospermidine) [9809].
Genome sequence: JANPVQ010000000.
Publication(s) using this strain [C13372, B23239].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingomicrobium flavum
JCM number: 18555 <-- C.-C. Young CC-AMZ-30N.

Source: Surface seawater (10 cm in depth) collected near Taichung harbour, Taiwan [9809].
Biochemistry/Physiology: [9809].
Fatty acid: [9809].
Quinone: Q-10 [9809].
Polar lipid: DPG, PG, PE, SGL, GLs, PLs, AL [9809].
G+C (mol%): 65.2 (HPLC) [9809].
Phylogeny: 16S rRNA gene (JX393854) [9809].
Other taxonomic data: Polyamine (triamine sym-homospermidine) [9809].
Genome sequence: CP102630.
Publication(s) using this strain [C13372, B23239].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kordia aquimaris
JCM number: 18556 <-- C.-C. Young CC-AMZ-301.

Source: Surface seawater (10 cm in depth) near Taichung harbour, Taiwan [9818].
Biochemistry/Physiology: [9818].
Fatty acid: [9818].
Quinone: MK-6 [9818].
Polar lipid: Ls, ALs, PL [9818].
G+C (mol%): 36 (HPLC) [9818].
Phylogeny: 16S rRNA gene (JX235671) [9818].
Other taxonomic data: Polyamine (triamine sym-homospermidine, putrescine) [9818].
Publication(s) using this strain [C13402].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudostreptobacillus hongkongensis
JCM number: 18691 <-- P. C. Y. Woo HKU33.
Biosafety level 2.
Source: Pus aspirated from the right peritonsillar abscess of a patient with quinsy, Hong Kong, China [10139].
Biochemistry/Physiology: [10139,10640,10863].
Fatty acid: [10863].
G+C (mol%): 26.0 (Tm) [10139].
DNA-DNA relatedness: [10139].
Phylogeny: 16S rRNA gene (JQ087389), groEL (JQ087394), gyrB (JQ087399), recA (JQ435797) [10139].
Other taxonomic data: FT-IR, MALD-TOF MS [10640].
Taxonomy: [10640,12935].
Genome sequence: LOHY00000000.
More information: Polyamine [13792].
Publication(s) using this strain [C14330, C20287].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium agarici
JCM number: 18705 <-- CCM 7686 <-- P. Kämpfer CC-SBCK-209.
Source: Stalk of the edible mushroom Agaricus blazei grown in the laboratory [9195].
Biochemistry/Physiology: [9195].
Cell wall: Type B2α (D-Glu-Gly-D-Orn) [9195].
Fatty acid: a-C15:0, i-C16:0, a-C17:0 [9195].
Quinone: MK-11, MK-12 [9195].
Polar lipid: DPG, PG [9195].
G+C (mol%): 64.5 (genome sequence) [12227].
DNA-DNA relatedness: [9195].
Phylogeny: 16S rRNA gene (FJ807673) [9195]; Concatenated 92 conserved core genes [14317].
Other taxonomic data: Polyamine (spermidine, spermine) [9195]; Average amino acid identity [14317].
Genome sequence: PDJE00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium humi
JCM number: 18706 <-- CCM 7687 <-- P. Kämpfer CC-12309.
Source: Stalk of the edible mushroom Agaricus blazei grown in the laboratory [9195].
Biochemistry/Physiology: [9195].
Cell wall: Type B2α (D-Glu-Gly-D-Orn) [9195].
Fatty acid: a-C15:0, i-C16:0, a-C17:0 [9195].
Quinone: MK-11, MK-10 [9195].
Polar lipid: DPG, PG [9195].
G+C (mol%): 67.3 (genome sequence) [12227].
DNA-DNA relatedness: [9195].
Phylogeny: 16S rRNA gene (FJ865215) [9195]; Concatenated 92 conserved core genes [14317].
Other taxonomic data: Polyamine (spermidine, spermine) [9195]; Average amino acid identity [14317].
Genome sequence: FNRY00000000.
Publication(s) using this strain [A21302].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium pseudoresistens
JCM number: 18707 <-- CCM 7688 <-- P. Kämpfer CC-5209.
Source: Stalk of the edible mushroom Agaricus blazei grown in the laboratory [9195].
Biochemistry/Physiology: [9195].
Cell wall: Type B2α (D-Glu-D-Orn) [9195].
Fatty acid: a-C15:0, i-C16:0, a-C17:0 [9195].
Quinone: MK-13 [9195].
Polar lipid: DPG, PG [9195].
Phylogeny: 16S rRNA gene (FJ865214) [9195].
Other taxonomic data: Polyamine (spermidine, spermine) [9195].
Genome sequence: BAABLC010000000, JACCBH000000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microlunatus soli
JCM number: 18709 <-- CCM 7685 <-- P. Kämpfer CC-12602.
Source: Spawn used for growing the edible mushroom Agaricus brasiliensis in the laboratory [9194].
Biochemistry/Physiology: [9194].
Cell wall: Type A3γ (LL-A2pm) [9194].
Fatty acid: a-C15:0, i-C16:0, n-C18:1 [9194].
Quinone: MK-9(H4) [9194].
Polar lipid: PG, DPG [9194].
G+C (mol%): 67.4 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (FJ807672) [9194].
Other taxonomic data: Polyamine (spermidine, spermine) [9194].
Genome sequence: LT629772.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium jejuense
JCM number: 18734 <-- T.-H. Yi THG-C31.
Source: Salty soil [10070].
Biochemistry/Physiology: [10070].
Cell wall: Orn [10070].
Fatty acid: i-C16:0, a-C15:0, a-C17:0 [10070].
Quinone: MK-12, MK-13 [10070].
Polar lipid: PG, DPG, GLs [10070].
DNA-DNA relatedness: [10070].
Phylogeny: 16S rRNA gene (JX997974) [10070].
Other taxonomic data: Polyamine (spermidine) [10070].
Genome sequence: BAABLG010000000.
Publication(s) using this strain [C14279, B21081].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium kyungheense
JCM number: 18735 <-- T.-H. Yi THG-C26.
Source: Salty soil [10070].
Biochemistry/Physiology: [10070].
Cell wall: Orn [10070].
Fatty acid: i-C16:0, a-C15:0, a-C17:0 [10070].
Quinone: MK-12, MK-13 [10070].
Polar lipid: PG, DPG, GLs [10070].
DNA-DNA relatedness: [10070].
Phylogeny: 16S rRNA gene (JX997973) [10070].
Other taxonomic data: Polyamine (spermidine) [10070].
Genome sequence: BAABLH010000000, VFPE00000000.
Publication(s) using this strain [C14279, B21081].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chryseobacterium camelliae
JCM number: 18745 <-- T.-H. Yi THG C4-1.
Source: Leaves of green tea (Camellia sinensis), Jangheung-gun, Republic of Korea [9947].
Biochemistry/Physiology: [9947].
Fatty acid: [9947].
Quinone: MK-6 [9947].
Polar lipid: PE [9947].
G+C (mol%): 41.7 (HPLC) [9947].
DNA-DNA relatedness: [9947].
Phylogeny: 16S rRNA gene (JX843771) [9947].
Other taxonomic data: Polyamine (sym-homospermidine) [9947].
Genome sequence: CP022986.
Publication(s) using this strain [C14416, B15042].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Christiangramia planctonica
JCM number: 18807 <-- C.-C. Young CC-AMWZ-3.

Source: Surface seawater off the coastal Kending, Taiwan [10089].
Biochemistry/Physiology: [10089].
Fatty acid: [10089].
Quinone: MK-6 [10089].
Polar lipid: PE [10089].
G+C (mol%): 40.6 (HPLC) [10089].
Phylogeny: 16S rRNA gene (KC169794) [10089].
Other taxonomic data: Polyamine (sym-homospermidine) [10089].
Taxonomy: [14033].
Production: Zeaxanthin [10089].
Publication(s) using this strain [B14028].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Taibaiella koreensis
JCM number: 18823 <-- T.-H. Yi THG-DT86.
Source: Soil of a ginseng field, Pocheon Province, Republic of Korea [9949].
Biochemistry/Physiology: [9949].
Fatty acid: [9949].
Quinone: MK-7 [9949].
Polar lipid: PE [9949].
G+C (mol%): 50.1 (HPLC) [9949].
Phylogeny: 16S rRNA gene (KC252613) [9949].
Other taxonomic data: Polyamine (homospermidine) [9949].
Genome sequence: QVNU000000000.
Publication(s) using this strain [C14210].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Alteristakelama kyeonggiensis
JCM number: 18825 <-- T.-H. Yi THG-DT81.
Source: Soil of ginseng field of Pocheon Province, Republic of Korea [9936].
Biochemistry/Physiology: [9936].
Fatty acid: [9936].
Quinone: Q-10 [9936].
Polar lipid: SPG, PE, PG, DPG, PC [9936].
G+C (mol%): 66.8 (HPLC) [9936]; 66.8 (genome sequence) [14823].
DNA-DNA relatedness: [9936,14823].
Phylogeny: 16S rRNA gene [9936,14823]; Phylogenomic analysis [14823].
Other taxonomic data: Polyamine (sym-homospermidine) [9936].
Genome sequence: JACIEH000000000.
Publication(s) using this strain [C14030, A15212, A19537, A24431].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Novosphingobium arabidopsis
JCM number: 18896 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-ALB-2.
Source: Rhizosphere of Arabidopsis thaliana [9893].
Biochemistry/Physiology: [9893].
Fatty acid: [9893].
Quinone: Q-10 [9893].
Polar lipid: SGL, DPG, PE, PDE, PG, GL, PC [9893].
G+C (mol%): 68.9±0.1 (HPLC) [9893].
Phylogeny: 16S rRNA gene (KC479803) [9893].
Other taxonomic data: Polyamine (spermidine).
Publication(s) using this strain [C14405].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Salinicoccus sesuvii
JCM number: 19029 <-- DSM 23267 <-- P. Kämpfer CC-SPL15-2 <-- A. B. Arun.
Source: Rhizosphere of Sesuvium portulacastrum [9428].
Biochemistry/Physiology: [9428].
Cell wall: Lysine [9428].
Fatty acid: [9428].
Quinone: MK-6 [9428].
Polar lipid: [9428].
DNA-DNA relatedness: [9428].
Phylogeny: 16S rRNA gene (FR669114) [9428].
Other taxonomic data: Polyamine [9428].
Genome sequence: JBHSCC010000000, BAAGSV010000000.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardia grenadensis
JCM number: 19117 <-- CCUG 60970 <-- P. Kämpfer GW5-5797.
Source: Sand at a depth of 5 m in the Caribbean Sea near Grenada [9377].
Biochemistry/Physiology: [9377].
Cell wall: meso-A2pm [9377].
Fatty acid: n-C16:0, n-C18:1ω9c, 10Me-C18:0 [9377].
Quinone: MK-8(H4, ω-cycl), MK-8(H2) [9377].
Polar lipid: DPG, PE, PI, PIMs [9377].
DNA-DNA relatedness: [9377].
Phylogeny: 16S rRNA gene (FR729900) [9377].
Other taxonomic data: Polyamine (spermine, spermidine) [9377].
Genome sequence: BDCJ00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Tessaracoccus lubricantis
JCM number: 19125 <-- CCUG 55516 <-- P. Kämpfer KSS-17Se.
Source: Metalworking fluid, Giessen, Germany [9384].
Biochemistry/Physiology: [9384].
Cell wall: LL-A2pm [9384].
Fatty acid: a-C15:0, i-C14:0, i-C15:0, i-C16:0, a-C17:0 [9384].
Quinone: MK-9(H4) [9384].
Polar lipid: DPG, PG, PE (minor) [9384].
DNA-DNA relatedness: [9384].
Phylogeny: 16S rRNA gene (FM178840) [9384].
Other taxonomic data: Polyamine (spermidine, spermine) [9384].
Genome sequence: BAABLV010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Parastakelama yantingensis
JCM number: 19201 <-- J. Huang and X. Sheng 1007.

Source: Purplish soil in Yanting, Sichuan, China [9950].
Biochemistry/Physiology: [9950].
Fatty acid: [9950].
Quinone: Q-10 [9950].
Polar lipid: PG, PE, PC [9950].
G+C (mol%): 67±0.7 (HPLC) [9950]; 68.2 (genome sequence) [14823].
DNA-DNA relatedness: [9950,14823].
Phylogeny: 16S rRNA gene (JX566547) [9950,14823]; Phylogenomic analysis [14823].
Other taxonomic data: Polyamine (homospermidine) [9950].
Genome sequence: JACIJJ000000000.
Publication(s) using this strain [C14211, A17230, A19261].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pedobacter seoulensis
JCM number: 19363 <-- T.-H. Yi; Kyung Hee Univ., South Korea; THG-G12.
Source: Soil of a bamboo field in Seoul, Republic of Korea [10510].
Biochemistry/Physiology: [10510].
Fatty acid: [10510].
Quinone: MK-7 [10510].
Polar lipid: PE, PGLs, APGLs, ALs, CerPEs [10510].
G+C (mol%): 39.9 (Tm) [10510].
DNA-DNA relatedness: [10510].
Phylogeny: 16S rRNA gene (KF150693) [10510].
Other taxonomic data: Polyamine (sym-homospermidine) [10510].
Publication(s) using this strain [C14039].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Falsiroseomonas wooponensis
JCM number: 19527 <-- C. N. Seong WW53.
Source: Wetland freshwater, Woopo wetland, Republic of Korea [10889].
Biochemistry/Physiology: [10889].
Fatty acid: [10889].
Quinone: Q-10 [10889].
Polar lipid: PE, PC, AL [10889].
G+C (mol%): 71 (Tm) [10889].
Phylogeny: 16S rRNA gene (KF619243) [10889,13603].
Other taxonomic data: Polyamine (spermidine) [10889].
Publication(s) using this strain [C15396, A20394, A23200].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rhizobium straminoryzae
JCM number: 19536 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-LY845.

Source: Surface of rice straw, Taiwan [10154].
Biochemistry/Physiology: [10154].
Fatty acid: [10154].
Quinone: Q-10 [10154].
G+C (mol%): 68.3±2.4 (HPLC) [10154].
DNA-DNA relatedness: [10154].
Phylogeny: 16S rRNA gene (KF444510), atpD (KJ863419), recA (KJ863426) [10154].
DNA typing: BOX-PCR [10154].
Other taxonomic data: Polyamine (spermidine, putrescine) [10154].
Publication(s) using this strain [C14324].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paenibacillus yonginensis
JCM number: 19885 <-- D.-C. Yang and Y.-J. Kim DCY84.
Source: Humus soil of Yongin forest, Gyeonggi Province, South Korea [10503].
Cell wall: meso-A2pm, Ala, D-Glu; Rib, Gal, Xyl [10503].
Fatty acid: a-C15:0, n-C16:0, a-C17:0 [10503].
Quinone: MK-7 [10503].
Polar lipid: PE, APL, ALs [10503].
G+C (mol%): 62.6 (HPLC) [10503].
Phylogeny: 16S rRNA gene (KF915796) [10503].
Other taxonomic data: Polyamine (spermidine) [10503].
Genome sequence: CP014167.
Publication(s) using this strain [C14073, C16129, C17572, A20015].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Labrys soli
JCM number: 19895 <-- D.-C. Yang and Y.-J. Kim DCY64.
Source: Rhizosphere of three-year-old Korean ginseng root from Gyeryong Mountain, Chungcheong Province, Republic of Korea [10884].
Biochemistry/Physiology: [10884].
Fatty acid: [10884].
Quinone: Q-10 [10884].
Polar lipid: PMME, PG, PC, DPG [10884].
G+C (mol%): 63 (HPLC) [10884].
DNA-DNA relatedness: [10884].
Phylogeny: 16S rRNA gene (JX315532) [10884].
DNA typing: ERIC-PCR [10884].
Other taxonomic data: Polyamine (sym-homospermidine) [10884].
Publication(s) using this strain [B15384].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermus igniterrae
JCM number: 19899 <-- DSM 12459 <-- M. S. da Costa RF-4.
Source: Hot springs at Reykyaflot in Iceland [9847].
Biochemistry/Physiology: [9847].
Fatty acid: [9847].
Polar lipid: [9847].
G+C (mol%): 70.3 (HPLC) [9847].
DNA-DNA relatedness: [9847].
Phylogeny: 16S rRNA gene (Y18406) [9847].
Other taxonomic data: Polyamine [11445].
Genome sequence: AQWU00000000.
Publication(s) using this strain [A16580].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermus antranikianii
JCM number: 19900 <-- DSM 12462 <-- M. S. da Costa HN3-7.
Source: Hot springs at Hruni in Iceland [9847].
Biochemistry/Physiology: [9847].
Fatty acid: [9847].
Polar lipid: [9847].
G+C (mol%): 65.4 (HPLC) [9847].
DNA-DNA relatedness: [9847].
Phylogeny: 16S rRNA gene (Y18411) [9847].
Other taxonomic data: Polyamine [11445].
Genome sequence: AUIW00000000.
  
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Publication(s) using this strain [A16580].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermus islandicus
JCM number: 19901 <-- DSM 21543 <-- S. K. Petursdottir <-- S. Bjornsdottir PRI 3838.
Source: Hot spring in the Torfajokull geothermal area in Iceland [9848].
Biochemistry/Physiology: [9848].
Fatty acid: [9848].
Quinone: MK-8 [9848].
Polar lipid: [9848].
G+C (mol%): 69.0 (HPLC) [9848].
DNA-DNA relatedness: [9848].
Phylogeny: 16S rRNA gene (EU753247) [9848].
Other taxonomic data: Polyamine [11445].
Genome sequence: ATXJ00000000.
  
open link in new window
open link in new window
Publication(s) using this strain [A16580].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Thermus composti
JCM number: 19902 <-- DSM 21686 <-- B. Vajna K-39.
Source: Thermophilic phase of the composting process for oyster mushroom substrate preparation [9849].
Biochemistry/Physiology: [9849].
Cell wall: Type A3β (L-Orn-Gly-Gly) [9849].
Fatty acid: [9849].
Quinone: MK-8 [9849].
Polar lipid: [9849].
G+C (mol%): 71.3 (HPLC) [9849].
Phylogeny: 16S rRNA gene (EU701067) [9849].
Other taxonomic data: Polyamine [11445].
Genome sequence: BMPJ01000001.
More information: Occurrence of pyropentamine and homopyropentamine [11445].
Publication(s) using this strain [A16580].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Kouleothrix aurantiaca"
JCM number: 19913 <-- T. Kohno COM-B.
Source: Activated sludge sample [9964].
Biochemistry/Physiology: [9964].
Phylogeny: 16S rRNA gene (AB079637) [9964].
More information: Polyamine [13792].
  
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Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Herpetosiphon sp.
JCM number: 19918 <-- T. Kohno OSI-B2.
Source: Activated sludge.
Phylogeny: 16S rRNA gene (AB079642).
More information: Polyamine [13792].
  
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Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Sphingomonas mohensis"
JCM number: 19983 <-- J. Lv; Beijing Univ. of Chem. Technol., China; Z6.
Source: Terrestrial sediment collected from a borehole that lies in the Mohe Basin of northeast China (53°28'37.80"N, 122°19'23.40"E; at a depth of 1,327 m) [11748].
Biochemistry/Physiology: [11748].
Fatty acid: [11748].
Quinone: Q-10 [11748].
Polar lipid: DPG, PE, SGL, PLs [11748].
G+C (mol%): 65.2 (HPLC) [11748].
Phylogeny: 16S rRNA gene (KF877719) [11748].
Other taxonomic data: Polyamine (homospermidine) [11748].
Publication(s) using this strain [C16107].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudaminobacter defluvii
JCM number: 20757 <-- IAM 12817 <-- Y. Katayama THI 051 <-- H. Murooka 66.
Source: Activated sludge.
Biochemistry/Physiology: [6662].
Fatty acid: [6662].
Quinone: Q-10 [6662].
Polar lipid: PC, PG, PDE, PME, PE, DPG [6662].
G+C (mol%): 62.9 (HPLC) [6662].
DNA-DNA relatedness: [6662].
Phylogeny: 16S rRNA gene (AB680636, D32248).
Other taxonomic data: Polyamine (putrescine, spermidine, sym-homospermidine) [6662].
Publication(s) using this strain [A17196].
Delivery category: Domestic, A or C; Overseas, A or C.
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aspergillus terreus
JCM number: 22435 <-- IAM 3004 <-- QM 82-j.
Source: Haversack.
Locality: Finschhafen, Papua New Guinea.
Quinone: Q-10(H2) [3208].
Other taxonomic data: Aspergillus section Terrei.
More information: Identified by W. L. White.
Production: Polyamine oxidase [7104,7105,7106] and antiviral agent LL-S88 alpha (US Pat. 3,701,774).
Application: Fungus resistance test (JIS Z 2911:2018).
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fusarium moniliforme
JCM number: 22447 <-- IAM 5062 <-- ATCC 10052 <-- USDA (P. B. Marsh 1004.1).
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Avena sativa (Gramineae).
Locality: India.
Production: Polyamine oxidase [7104], giberellin A3.
Application: Fungus resistance test (JIS Z 2911:2000); US Military Specifications for fungus resistance test.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingorhabdus buctiana
JCM number: 30114 <-- J. Lv; Beijing Univ. of Chem. Technol., China; T5.
Source: Fresh water of the Chishui River in Maotai Town, Guizhou Province, China [12210].
Biochemistry/Physiology: [12210].
Fatty acid: [12210].
Quinone: Q-10 [12210].
Polar lipid: PE, GL, PLs, APL [12210].
G+C (mol%): 58.5 (HPLC) [12210].
Phylogeny: 16S rRNA gene (KJ667149) [12210].
Other taxonomic data: Polyamine (homospermidine) [12210].
Publication(s) using this strain [C18030, B19278].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chryseobacterium shandongense
JCM number: 30154 <-- H. Qing; Coll. of Life Sci., Nanjing Agric. Univ., China; YF-3.
Source: Farmland soil from Qingdao City, Shandong Province, China [10647].
Biochemistry/Physiology: [10647].
Fatty acid: [10647].
Quinone: MK-6 [10647].
Polar lipid: PE, Ls, ALs [10647].
G+C (mol%): 37 (HPLC) [10647].
DNA-DNA relatedness: [10647].
Phylogeny: 16S rRNA gene (KJ644318) [10647].
Other taxonomic data: Polyamine (sym-homospermidine) [10647].
Publication(s) using this strain [C15260, B17440, A21107].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Parasphingorhabdus pacifica
JCM number: 30177 <-- N. Tanaka; Tokyo Univ. of Agric., Japan; n34.
Source: Sand sediment sample collected from Peter the Great Bay, the Sea of Japan, Russia [10463].
Biochemistry/Physiology: [10463].
Fatty acid: [10463].
Quinone: Q-10 [10463].
Polar lipid: PC, SGL, PE, PG, DPG [10463].
G+C (mol%): 56.5 (Tm) [10463].
Phylogeny: 16S rRNA gene (AB936074) [10463].
Other taxonomic data: Polyamine (spermidine) [12924].
Taxonomy: [12924].
Genome sequence: BAAGYS010000000.
Publication(s) using this strain [B15111].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Fusobacterium hwasookii"
JCM number: 30218 <-- J.-K. Kook; KCOM, Chosun Univ., South Korea; ChDC F128.
Biosafety level 2 (provisional).
Source: Subgingival plaque [10558].
Biochemistry/Physiology: [10558].
Fatty acid: [10558].
G+C (mol%): 26.9 (HPLC) [10558].
DNA-DNA relatedness: [10558].
Phylogeny: 16S rRNA gene (FJ471641).
Genome sequence: CP060112, CP060113 (plasmid pFh1249-1), CP060114 (plasmid pFh1249-2).
More information: Polyamine [13792].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD20030.
  
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Publication(s) using this strain [C15148].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chelatococcus reniformis
JCM number: 30308 <-- Y. Liu; Inst. of Tibetan Plateau Res., CAS, China; B2974.
Source: Ice core of the Muztagh Glacier, on the Tibetan Plateau, China [11427].
Biochemistry/Physiology: [11427].
Fatty acid: [11427].
Quinone: Q-10 [11427].
G+C (mol%): 64 (Tm) [11427].
DNA-DNA relatedness: [11427].
Phylogeny: 16S rRNA gene (KJ469373) [11427].
Other taxonomic data: Polyamine (sym-homospermidine) [11427].
Genome sequence: BMGG000000000.
Publication(s) using this strain [C16358].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paracoccus panacisoli
JCM number: 30337 <-- D.-C. Yang and Y.-J. Kim; Kyung Hee Univ., South Korea; DCY94.
Source: Soil sample cultivated with ginseng, Quang Nam Province, Vietnam [10487].
Biochemistry/Physiology: [10487].
Fatty acid: [10487].
Quinone: Q-10 [10487].
Polar lipid: PE, PG, PC, GL [10487].
G+C (mol%): 68.3 (HPLC) [10487].
DNA-DNA relatedness: [10487].
Phylogeny: 16S rRNA gene (KJ653224) [10487].
Other taxonomic data: Polyamine (putrescine, spermidine) [10487].
Genome sequence: JBHMQU00000000.
Publication(s) using this strain [C15235].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chryseobacterium echinoideorum
JCM number: 30470 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-CZW010.
Source: Edible sea urchin Tripneustes gratilla in Penghu Island, Taiwan [10887].
Biochemistry/Physiology: [10887].
Fatty acid: [10887].
Quinone: MK-6 [10887].
Polar lipid: PE, ALs [10887].
G+C (mol%): 36.4 (HPLC) [10887].
Phylogeny: 16S rRNA gene (KM206767) [10887].
Other taxonomic data: Polyamine (sym-homospermidine) [10887].
Genome sequence: VKNW000000000.
Publication(s) using this strain [A20211].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Brevibacterium sandarakinum
JCM number: 30489 <-- CCM 7649 <-- P. Kämpfer; Justus-Liebig-Univ. Giessen, Germany; 01-Je-003.
Source: Wall of a house colonized with moulds, Jena, Germany [10204].
Biochemistry/Physiology: [10204].
Cell wall: meso-A2pm [10204].
Fatty acid: a-C15:0, a-C17:0, i-C15:0 [10204].
Quinone: MK-8(H2), MK-7(H2) [10204].
Polar lipid: DPG, PG, GL, APL [10204].
G+C (mol%): 63.3 (genome sequence) [12227].
DNA-DNA relatedness: [10204].
Phylogeny: 16S rRNA gene (FN293377) [10204].
Other taxonomic data: Polyamine (putrescine, cadaverine) [10204].
Genome sequence: LT629739.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Novosphingobium oryzae
JCM number: 30537 <-- X. Zhang; ACCC, China; ZYY112.
Source: Rice roots in Hunan Province, China [10937].
Biochemistry/Physiology: [10937].
Fatty acid: [10937].
Quinone: Q-10 [10937].
Polar lipid: DPG, PE, PG, SGL, AL, PL [10937].
G+C (mol%): 60.8 (Tm) [10937].
DNA-DNA relatedness: [10937].
Phylogeny: 16S rRNA gene (KJ940052) [10937].
Other taxonomic data: Polyamine (spermidine) [10937].
Publication(s) using this strain [C16280, B17287].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides zeae
JCM number: 30728 <-- CIP 110696 <-- P. Kämpfer; Justus-Liebig-Univ. Giessen, Germany; JM-1068.
Source: Healthy stem of a Zea mays plant [10375].
Biochemistry/Physiology: [10375].
Cell wall: LL-A2pm [10375].
Fatty acid: i-C16:0, n-C18:1ω9c, n-C16:0, n-C17:0, n-C17:1ω8c [10375].
Quinone: MK-8(H4) [10375].
Polar lipid: DPG, PG, PE, PI, PLs [10375].
Phylogeny: 16S rRNA gene (KF900163) [10375].
Other taxonomic data: Polyamine (spermidine, spermine) [10375].
Genome sequence: JAAGXA000000000, BAAGUG010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Parasphingomonas panacis
JCM number: 30806 <-- D.-C. Yang; Kyung-Hee Univ., South Korea; DCY99.
Source: Surface of rusty mountain ginseng at Hwacheon Mountain, Gangwon Province, Republic of Korea [10962].
Biochemistry/Physiology: [10962].
Fatty acid: [10962].
Quinone: Q-10 [10962].
Polar lipid: SGL, DPG, PE, PG, PC [10962].
G+C (mol%): 64.4 (HPLC) [10962]; 65.5 (genome sequence) [14823].
DNA-DNA relatedness: [10962,14823].
Phylogeny: 16S rRNA gene [10962,14823]; Phylogenomic analysis [14823].
Other taxonomic data: Polyamine (sym-homospermidine) [10962].
Genome sequence: CP014168.
Publication(s) using this strain [B15075, C19101, B22484].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Akkermansia muciniphila
JCM number: 30893 <-- M. Sakamoto; RIKEN BRC-JCM, Japan; CBH12S.
Source: Feces of a man in the forties.
Phylogeny: 16S rRNA gene (LC071790).
Genome sequence: AP021898 (chromosome), AP021899 (plasmid pJ30893) [12827], CP048438.
More information: Adherence to porcine mucin [13630], Polyamine [13792].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD18224.
  
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Publication(s) using this strain [A20448, C20511, A20535, A21483, A21486, A22502, A24048, A24412].
Patent publication(s) using this strain [2022-103708, 2022-50998, P2024-137759A, P2024-137760A, P2024-38951A, P2024-38952A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rectinema cohabitans
JCM number: 30982 <-- H. Mouttaki; Inst. of Groundwater Ecol., Helmholtz Zentrum München, Germany; HM.
Source: Anaerobic naphthalene-degrading, sulfate-reducing enrichment culture, which was enriched from soil of a contaminated aquifer near Stuttgart, Germany [11814].
Biochemistry/Physiology: [11814].
Fatty acid: [11814].
G+C (mol%): 51.5 [11814].
Phylogeny: 16S rRNA gene (KP297860) [11814].
More information: Polyamine [13792].
  
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Publication(s) using this strain [C17172].
Delivery category: Domestic, A or C; Overseas, A.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptosporangium sandarakinum
JCM number: 30998 <-- LMG 27062 <-- P. Kámpfer; Justus-Liebig-Univ. Giessen, Germany; GW-12028 <-- I. Grün-Wollny; Lab. Grün-Wollny, Germany.
Source: Soil of unknown origin [10613].
Biochemistry/Physiology: [10613].
Cell wall: meso-A2pm; Mad, Glc, Rha [10613].
Fatty acid: 10Me-C17:0, i-C16:0, n-C15:0 [10613].
Quinone: MK-92), MK-9(H4), MK-9(H0) [10613].
Polar lipid: DPG, PG, PE, OH-PE, PI, PIMs, GLs, PL, AL [10613].
DNA-DNA relatedness: [10613].
Phylogeny: 16S rRNA gene (JX977118) [10613].
Other taxonomic data: Polyamine (spermine and spermidine) [10613].
Genome sequence: JACCCO000000000, BAAGTQ010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leeuwenhoekiella marinoflava
JCM number: 31008 <-- LMG 1345 <-- NCIMB 397 <-- R. Spencer SW1 (Flavobacterium sp.).
Source: Seawater in the North Sea off Aberdeen, Scotland, UK [2911].
Fatty acid: [6026].
Quinone: MK-6 [3903].
G+C (mol%): 37 (Bd) [2911], 38 (HPLC) [6026].
DNA-DNA relatedness: [6026].
Phylogeny: 16S rRNA gene (D12668) [3903], 16S rRNA gene (AB680577, AF203475, M58770) [3888,6026].
Other taxonomic data: Polyamine [5054].
Taxonomy: [6026].
Genome sequence: FQUN00000000, QOVL00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptobacillus ratti
JCM number: 31098 <-- K. Imaoka; Dept. of Vet. Sci., Natl. Inst. of Infect. Dis., Japan; OGS16.
Biosafety level 2 (provisional).
Source: Oral cavity of an asymptomatic black rat (Rattus rattus) [11059].
Biochemistry/Physiology: [11059].
Fatty acid: [11059].
G+C (mol%): 25.9 (genome sequence) [11059].
Phylogeny: 16S rRNA gene (KR001922), gyrB (KR001922), groEL (KR001941), recA (KR001979) [11059].
Other taxonomic data: Average nucleotide identity [11059]; MALDI-TOF MS [11059].
Genome sequence: LKKW00000000 [11059].
More information: Polyamine [13792].
  
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Publication(s) using this strain [C16213].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Novosphingobium naphthae
JCM number: 31158 <-- J. Kim; Kyonggi Univ., South Korea; D39.
Source: Oil-contaminated soil of Gunsan, North Jeolla Province, South Korea [11234].
Biochemistry/Physiology: [11234].
Fatty acid: [11234].
Quinone: Q-10 [11234].
Polar lipid: PG, DPG, PE, PC, SGL, PME [11234].
G+C (mol%): 66.7 (HPLC) [11234].
DNA-DNA relatedness: [11234].
Phylogeny: 16S rRNA gene (KT884900) [11234].
Other taxonomic data: Polyamine (spermidine) [11234].
Publication(s) using this strain [C16427, A17248].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Filimonas aquilariae
JCM number: 31197 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-YHH650.
Source: Agarwood chips, Nantou Country, Taiwan [11729].
Biochemistry/Physiology: [11729].
Fatty acid: [11729].
Quinone: MK-7 [11729].
Polar lipid: [11729].
G+C (mol%): 46.6 (HPLC) [11729].
DNA-DNA relatedness: [11729].
Phylogeny: 16S rRNA gene (KU248163) [11729].
Other taxonomic data: Polyamine (sym-homospermidine) [11729].
  
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Publication(s) using this strain [B17294].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium keumense
JCM number: 31220 <-- S. B. Kim; Chungnam Natl. Univ., South Korea; K3R-10.
Source: Freshwater source [11689].
Biochemistry/Physiology: [11689].
Fatty acid: [11689].
Quinone: MK-6 [11689].
Polar lipid: PE, AL, PLs [11689].
G+C (mol%): 35.4 (Tm, fluorimetric method) [11689].
Phylogeny: 16S rRNA gene (KC355348) [11689].
Other taxonomic data: Polyamine (homospermidine) [11689].
Genome sequence: CP092332.
Publication(s) using this strain [C17231, B22246].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chryseobacterium endophyticum
JCM number: 31226 <-- C.-C. Young; Coll. of Agric. & Nat. Resour., Natl. Chung Hsing Univ., Taiwan; CC-YTH209.
Source: Maize leaf, Taiwan [11507].
Biochemistry/Physiology: [11507].
Fatty acid: [11507].
Quinone: MK-6 [11507].
Polar lipid: PE, ALs, GL, APL, PL [11507].
G+C (mol%): 37.2 (HPLC) [11507].
DNA-DNA relatedness: [11507].
Phylogeny: 16S rRNA gene (KU358716) [11507].
Other taxonomic data: Polyamine (sym-homospermidine) [11507].
Publication(s) using this strain [B17435].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Allorhizobium terrae
JCM number: 31228 <-- C.-C. Young; Coll. of Agric. & Nat. Resour., Natl. Chung Hsing Univ., Taiwan; CC-HIH110.
Source: Paddy soil in Taiwan [12840].
Biochemistry/Physiology: [12840].
Fatty acid: [12840].
Quinone: Q-10 [12840].
Polar lipid: DPG, PG, PE, PMME, PDME, PC, APLs, PLs [12840].
G+C (mol%): 55.0 (genome sequence) [12840].
Phylogeny: 16S rRNA gene (KU248159) [12840].
Other taxonomic data: Polyamine (homospermidine); Average nucleotide identity, genome-to-genome distances [12840].
Genome sequence: SSOA00000000 [12840].
Publication(s) using this strain [C20196].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yabuuchia colocasiae
JCM number: 31229 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-MHH0539.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Chopped tuber of taro (Colocasia esculanta), Taiwan [11936].
Biochemistry/Physiology: [11936].
Fatty acid: [11936].
Quinone: Q-10 [11936].
Polar lipid: DPG, PG, PC, PE, PME, SGLs, PLs [11936].
G+C (mol%): 69.5 (HPLC) [11936], 65.6 (genome sequence) [14823].
DNA-DNA relatedness: [14823].
Phylogeny: 16S rRNA gene [11936,14823]; Phylogenomic analysis [14823].
Other taxonomic data: Polyamine (sym-homospermidine) [11936].
Genome sequence: JAINVV000000000.
Publication(s) using this strain [C18204, B22340].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Teichococcus deserti
JCM number: 31275 <-- S.-S. Lee; KEMB, Kyonggi Univ., South Korea; M3.
Source: Crude oil contaminated desert sand, Kuwait [11978].
Biochemistry/Physiology: [11978].
Fatty acid: [11978].
Quinone: Q-10 [11978].
Polar lipid: DPG, PG, PE, PC, GL [11978].
G+C (mol%): 69.5 (HPLC) [11978], 71.1 (genome sequence) [13603].
DNA-DNA relatedness: [11978,13603].
Phylogeny: 16S rRNA gene [11978,13603,14696], phylogenomic analysis [13603,14696].
Other taxonomic data: Polyamine (spermidine) [11978].
Genome sequence: MLCO00000000.
Publication(s) using this strain [C18381, A21237].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Neorhizorhabdus naphthae
JCM number: 31294 <-- J. Kim; Kyonggi Univ., South Korea; DKC-5-1.
Source: Oil-contaminated soil of Gunsan, North Jeolla Province, South Korea [11426].
Biochemistry/Physiology: [11426].
Fatty acid: [11426].
Quinone: Q-10 [11426].
Polar lipid: PG, DPG, PE, PC, SGL, PDME [11426].
G+C (mol%): 65.9 (HPLC) [11426]; 67.3 (genome sequence) [14823].
DNA-DNA relatedness: [14823].
Phylogeny: 16S rRNA gene [11426,14823]; Phylogenomic analysis [14823].
Other taxonomic data: Polyamine (homospermidine) [11426].
Genome sequence: CP117411, CP117412, CP117413, CP117414, CP117415.
Publication(s) using this strain [C16363].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingomonas palustris
JCM number: 31399 <-- C. N. Seong; Sunchon Natl. Univ., South Korea; WM95.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Freshwater of Woopo wetland, Republic of Korea [11699].
Biochemistry/Physiology: [11699].
Fatty acid: [11699].
Quinone: Q-10 [11699].
Polar lipid: DPG, PC, PE, PG, SGL [11699].
DNA-DNA relatedness: [11699].
Phylogeny: 16S rRNA gene (KR780024) [11699].
Other taxonomic data: Polyamine (sym-homospermidine) [11699].
Publication(s) using this strain [C17272].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Telluria agilis
JCM number: 31605 <-- J. Kim; Kyonggi Univ., South Korea; J9.
Source: Forest soil at Kyonggi Univ., South Korea [11700].
Morphology: [11700].
Biochemistry/Physiology: [11700].
Chemotaxonomy: [11700].
G+C (mol%): 64.5 (HPLC) [11700].
DNA-DNA relatedness: [11700].
Phylogeny: 16S rRNA gene (KU870756) [11700]; Concatenated 120 conserved proteins [14198].
Other taxonomic data: Polyamine (putrescine, 2-hydroxyputrescine) [11700].
Genome sequence: JANUHB00000000 [14198], BAAGVU010000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD19150.
Publication(s) using this strain [C17282, A23289].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Telluria terrae
JCM number: 31606 <-- J. Kim; Kyonggi Univ., South Korea; J11.
Source: Forest soil at Kyonggi Univ., South Korea [11700].
Morphology: [11700].
Biochemistry/Physiology: [11700].
Chemotaxonomy: [11700].
Fatty acid: [11700].
Quinone: Q-8 [11700].
Polar lipid: DPG, PG, PE, ALs, PL, L [11700].
G+C (mol%): 68.7 (HPLC) [11700].
DNA-DNA relatedness: [11700].
Phylogeny: 16S rRNA gene (KU870757) [11700]; Concatenated 120 conserved proteins [14198].
Other taxonomic data: Polyamine (putrescine, 2-hydroxyputrescine) [11700].
Genome sequence: JANUGU000000000 [14198], BAAGVW010000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD19156.
Publication(s) using this strain [C17282, A23289].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Telluria solisilvae
JCM number: 31607 <-- J. Kim; Kyonggi Univ., South Korea; J18.
Source: Forest soil at Kyonggi Univ., South Korea [11700].
Morphology: [11700].
Biochemistry/Physiology: [11700].
Fatty acid: [11700].
Quinone: Q-8 [11700].
Polar lipid: DPG, PG, PE ALs, L [11700].
G+C (mol%): 63.4 (HPLC) [11700].
DNA-DNA relatedness: [11700].
Phylogeny: 16S rRNA gene (KU870758) [11700]; Concatenated 120 conserved proteins [14198].
Other taxonomic data: Polyamine (2-hydroxyputrescine) [11700].
Genome sequence: JANUGV000000000 [14198], BAAGVV010000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD19155.
Publication(s) using this strain [C17282, A23289].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingomonas olei
JCM number: 31674 <-- J. Kim; Kyonggi Univ., South Korea; K-1-16.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Oil-contaminated soil at Biratnagar, Morang, Nepal [11732].
Biochemistry/Physiology: [11732].
Fatty acid: [11732].
Quinone: Q-10 [11732].
Polar lipid: PE, PG, DPG, PC, PDME, SGL [11732].
G+C (mol%): 64.8 (HPLC) [11732].
DNA-DNA relatedness: [11732].
Phylogeny: 16S rRNA gene (KX672814) [11732].
Other taxonomic data: Polyamine (homospermidine) [11732].
Publication(s) using this strain [C17262, B22249].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingobium naphthae
JCM number: 31713 <-- J. Kim; Kyonggi Univ., South Korea; K-3-6.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Oil-contaminated soil of Biratnagar, Morang, Nepal [11733].
Biochemistry/Physiology: [11733].
Fatty acid: [11733].
Quinone: Q-10 [11733].
Polar lipid: PE, PG, DPG, PC, PDME, SGL, PME [11733].
G+C (mol%): 65.6 (HPLC) [11733].
DNA-DNA relatedness: [11733].
Phylogeny: 16S rRNA gene (KX672813) [11733].
Other taxonomic data: Polyamine (spermidine) [11733].
Publication(s) using this strain [C17278].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Isoptericola cucumis
JCM number: 31758 <-- CCM 8653 <-- S. P. Glaeser; Justus-Liebig-Univ. Giessen, Germany; AP-38.
Source: Root tissue of cucumber (Cucumis sativus), Auburn, AL, USA [11321].
Biochemistry/Physiology: [11321].
Cell wall: L-Lys [11321].
Fatty acid: a-C15:0. i-C15:0 [11321].
Quinone: MK-9(H4), MK-9(H2) [11321].
Polar lipid: DPG, PG, PI, PIMs [11321].
DNA-DNA relatedness: [11321].
Phylogeny: 16S rRNA gene (KU201961) [11321].
Other taxonomic data: Polyamine (spermidine, spermine, tyramine) [11321].
Genome sequence: BMDG00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rothia aerolata
JCM number: 31759 <-- CCM 8669 <-- P. Kämpfer; Justus-Liebig-Univ. Giessen, Germany; 140917-MRSA-09.
Source: Exhaust air of a pig barn, North Rhine-Westphalia, Germany [11323].
Biochemistry/Physiology: [11323].
Fatty acid: a-C15:0, a-C17:0, i-C16:0 [11323].
Quinone: MK-8, MK-7.
Polar lipid: DPG, PG [11323].
G+C (mol%): 58.9 (Tm, fluorimetric method) [11323].
Phylogeny: 16S rRNA gene (KU878871) [11323].
Other taxonomic data: Polyamine (putrescine, spermidine) [11323].
Genome sequence: BMDC00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingomonas silvisoli
JCM number: 31801 <-- T.-Y. Ahn; Dept. of Microbiol., Coll. of Nat. Sci., Dankook Univ., South Korea; RP18.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Forest soil in Gwang-ju, Republic of Korea [11731].
Biochemistry/Physiology: [11731].
Fatty acid: [11731].
Quinone: Q-10 [11731].
Polar lipid: DPG, PG, PE, PC, PL, SGL [11731].
G+C (mol%): 61.5 (HPLC) [11731].
Phylogeny: 16S rRNA gene (KU597283) [11731].
Other taxonomic data: Polyamine (sym-homospermidine) [11731].
Publication(s) using this strain [C17261, A19295].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Alterinovosphingobium humi
JCM number: 31879 <-- C. O. Jeon; Chung-Ang Univ., South Korea; R1-4.
Source: Soil from a military shooting range, Republic of Korea [11735].
Biochemistry/Physiology: [11735].
Fatty acid: [11735].
Quinone: Q-10 [11735].
Polar lipid: PG, PE, DPG, SGL, PC [11735].
G+C (mol%): 64.4 (Tm, fluorimetric method) [11735]; 63.6 (genome sequence) [14823].
DNA-DNA relatedness: [11735,14823].
Phylogeny: 16S rRNA gene [11735,14823]; Phylogenomic analysis [14823].
Other taxonomic data: Polyamine (spermidine) [11735].
Genome sequence: CP117417, CP117418, CP117419, CP117420.
Publication(s) using this strain [B17287].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paeniroseomonas fluminis
JCM number: 31968 <-- T.-Y. Ahn; Dankook Univ., South Korea; D3.
Source: Shallow stream sediments in Sinan-gun, South Korea [11981].
Biochemistry/Physiology: [11981].
Fatty acid: [11981].
Quinone: Q-10 [11981].
Polar lipid: DPG, PC, PE, PG [11981].
G+C (mol%): 73.1 (HPLC) [11981].
Phylogeny: 16S rRNA gene (KY649439) [11981,13603].
Other taxonomic data: Polyamine (spermidine) [11981].
Publication(s) using this strain [C18388].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Muricoccus aeriglobus
JCM number: 32049 <-- C. O. Jeon; Chung-Ang Univ., South Korea; KER25-12.
Source: Laboratory air-conditioning system, Seoul, South Korea [12211].
Biochemistry/Physiology: [12211].
Fatty acid: [12211].
Quinone: Q-10 [12211].
Polar lipid: DPG, PG, PE, PC, AL [12211].
G+C (mol%): 70.0 (fluorimetric method) [12211].
DNA-DNA relatedness: [12211].
Phylogeny: 16S rRNA gene [12211,13603,14696], phylogenomic analysis [14696].
Other taxonomic data: Polyamine (spermidine) [12211].
Genome sequence: JAFHKN010000000.
Publication(s) using this strain [C18032].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingomonas frigidaeris
JCM number: 32053 <-- C. O. Jeon; Chung-Ang Univ., South Korea; KER25-10.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Laboratory air conditioning system, South Korea [11877].
Biochemistry/Physiology: [11877].
Fatty acid: [11877].
Quinone: Q-10 [11877].
Polar lipid: SGL, DPG, PG, PE, PC [11877].
G+C (mol%): 65.1 (Tm, fluorimetric method) [11877].
Phylogeny: 16S rRNA gene (KY873312) [11877].
Other taxonomic data: Polyamine (spermidine) [11877].
Publication(s) using this strain [C17335, A19222].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingobium limneticum
JCM number: 32054 <-- C. O. Jeon; Chung-Ang Univ., South Korea; Pch-B.
Source: Green alga Paulinella chromatophora, Chungcheongnam-do, Republic of Korea [11912].
Biochemistry/Physiology: [11912].
Fatty acid: [11912].
Quinone: Q-10 [11912].
Polar lipid: DPG, PG, PE, PME, SGLs, PC [11912].
G+C (mol%): 61.4 (Tm, fluorimetric method) [11912], 63.35 (genome sequence) [12925].
DNA-DNA relatedness: [11912].
Phylogeny: 16S rRNA gene (KY864399) [11912].
Other taxonomic data: Polyamine (spermidine) [11912]; Average nucleotide identity, genome-to-genome distances [12925].
Taxonomy: [12925].
Genome sequence: VYQA00000000 [12925].
More information: Type strain of Sphingobium paulinellae [11912].
Publication(s) using this strain [C17420].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingobium limneticum
JCM number: 32055 <-- C. O. Jeon; Chung-Ang Univ., South Korea; Pch-E.
Source: Green alga Paulinella chromatophora, Chungcheongnam-do, Republic of Korea [11912].
Biochemistry/Physiology: [11912].
Fatty acid: [11912].
Quinone: Q-10 [11912].
Polar lipid: DPG, PG, PE, PME, SGLs, PC [11912].
G+C (mol%): 63.9 (Tm, fluorimetric method) [11912], 63.30 (genome sequence) [12925].
DNA-DNA relatedness: [11912].
Phylogeny: 16S rRNA gene (KY864398) [11912].
Other taxonomic data: Polyamine (spermidine) [11912]; Average nucleotide identity, genome-to-genome distances [12925].
Taxonomy: [12925].
Genome sequence: VYQB00000000 [12925].
More information: Type strain of Sphingobium algicola [11912].
Publication(s) using this strain [C17420].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Tessaracoccus terricola
JCM number: 32157 <-- J. Kim; Kyonggi Univ., South Korea; Brt-A.
Source: Oil-contaminated soil of Biratnagar, Morang, Nepal [11954].
Biochemistry/Physiology: [11954].
Cell wall: LL-A2pm; Glc, Rib [11954].
Fatty acid: a-C15:0, i-C15:0 [11954].
Quinone: MK-9(H4) [11954].
Polar lipid: PG, DPG, GLs, PL, ALs [11954].
G+C (mol%): 68.1 (HPLC) [11954].
DNA-DNA relatedness: [11954].
Phylogeny: 16S rRNA gene (MF405099) [11954].
Other taxonomic data: Polyamine (spermine, spermidine) [11954].
Genome sequence: BAAHBS010000000.
Publication(s) using this strain [C18368, A20255].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingopyxis nepalensis
JCM number: 32250 <-- J. Kim; Kyonggi Univ., South Korea; Ktm-14.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Oil-contaminated soil of Biratnagar, Morang, Nepal [11943].
Biochemistry/Physiology: [11943].
Fatty acid: [11943].
Quinone: Q-10 [11943].
Polar lipid: PE, PG, DPG, PC, PME, SGLs [11943].
G+C (mol%): 65.8 (HPLC) [11943].
DNA-DNA relatedness: [11943].
Phylogeny: 16S rRNA gene (MF405104) [11943].
Other taxonomic data: Polyamine (spermidine) [11943].
Publication(s) using this strain [C18339].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Zavarzinia aquatilis
JCM number: 32263 <-- C. O. Jeon; Chung-Ang Univ., South Korea; HR-AS.
Source: Water sample of the Han River located in the Republic of Korea [12431].
Biochemistry/Physiology: [12431].
Fatty acid: [12431].
Quinone: Q-10 [12431].
Polar lipid: DPG, AL, PLs [12431].
G+C (mol%): 67.2 (genome sequence) [12431].
Phylogeny: 16S rRNA gene (MF685296) [12431].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances; Polyamine (homospermidine, putrescine) [12431].
Genome sequence: QGLE00000000 [12431].
Publication(s) using this strain [C19366, A22324].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Flavobacterium parvum"
JCM number: 32368 <-- T.-Y. Ahn; Dept. of Microbiol., Coll. of Nat. Sci., Dankook Univ., South Korea; HS916.
Source: Soil polluted by sewer water in Cheonan-si, South Korea [12552].
Biochemistry/Physiology: [12552].
Fatty acid: [12552].
Quinone: MK-6 [12552].
Polar lipid: PE, ALs [12552].
G+C (mol%): 34.9 (HPLC) [12552].
Phylogeny: 16S rRNA gene (MF872859) [12552].
Other taxonomic data: Polyamine (sym-homospermidine) [12552].
Publication(s) using this strain [C18452].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Christiangramia fulva
JCM number: 32369 <-- T.-Y. Ahn; Dankook Univ., South Korea; SH35.
Source: Dry surface of a tidal flat in Hwasung-si, South Korea [12653].
Biochemistry/Physiology: [12653].
Fatty acid: [12653].
Quinone: MK-6 [12653].
Polar lipid: PE, ALs [12653].
G+C (mol%): 40.5 (HPLC), 39.7 (genome sequence) [12653].
Phylogeny: 16S rRNA gene (MF872860) [12653].
Other taxonomic data: Polyamine (sym-homospermidine) [12653]; Genome-to-genome distances [12653].
Taxonomy: [14033].
Genome sequence: CP028136 [12653].
Publication(s) using this strain [C19409].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides zeicaulis
JCM number: 32381 <-- CCM 8654 <-- S. P. Glaeser; Justus-Liebig-Univ. Giessen, Germany; JM-601 <-- J. A. McInroy; Auburn Univ., USA.
Source: Stem tissue of healthy 10-week-old, field-grown maize (Zea mays, cultivar 'Sweet Belle') at the Plant Breeding Unit facility, E.V. Smith Research Center, Tallassee, AL, USA [11830].
Biochemistry/Physiology: [11830].
Cell wall: LL-A2pm [11830].
Fatty acid: i-C16:0, n-C17:1ω8c, 10Me-C17:0 [11830].
Quinone: MK-8(H4) [11830].
Polar lipid: DPG, PG, PI, PLs [11830].
Phylogeny: 16S rRNA gene (KU201963) [11830].
Other taxonomic data: Polyamine (spermidine, spermine) [11830].
Genome sequence: JBHLXH00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium nasicanis
JCM number: 32433 <-- LMG 28166 <-- H.-J. Busse; Inst. für Mikrobiol., Veterinärmedizinische Univ. Wien, Austria; 2673/12.
Source: Dog's nose swab, Institute of Bacteriology, Mycology and Hygiene at the Veterinary University Vienna, Austria [11854].
Biochemistry/Physiology: [11854].
Cell wall: meso-A2pm [11854].
Fatty acid: n-C18:1ω9c, n-C16:0, n-C16:1ω7c and/or 2OH-i-C15:0 [11854].
Quinone: MK-8(H2), MK-9(H2) [11854].
Polar lipid: PG, PI, DPG, GL, PIM, PE, β-gentiobiosyl diacylglycerol, AL, Ls [11854].
DNA-DNA relatedness: [11854].
Phylogeny: 16S rRNA gene (HG799103) [11854].
Other taxonomic data: Mycolic acid (C26-36); Polyamine (spermidine) [11854].
Genome sequence: BAAGZN010000000.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium tapiri
JCM number: 32434 <-- LMG 28165 <-- H.-J. Busse; Inst. für Mikrobiol., Veterinärmedizinische Univ. Wien, Austria; 2385/12.
Source: Tonsil of a tapir, Institute of Bacteriology, Mycology and Hygiene at the Veterinary University Vienna, Austria [11854].
Biochemistry/Physiology: [11854].
Cell wall: meso-A2pm [11854].
Fatty acid: n-C18:1ω9c, n-C16:0, n-C10:0, n-C18:0 [11854].
Quinone: MK-9(H2), MK-8(H2) [11854].
Polar lipid: PG, DPG, GLs, β-gentiobiosyl diacylglycerol, PI, PIM, AL, AGL, Ls [11854].
DNA-DNA relatedness: [11854].
Phylogeny: 16S rRNA gene (HG799102) [11854].
Other taxonomic data: Mycolic acid (C26-36); Polyamine (putrescine) [11854].
Genome sequence: VDHJ00000000, BAAHBZ010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leptospira johnsonii
JCM number: 32515 <-- T. Masuzawa; Chiba Inst. of Sci., Japan; E8.
Biosafety level 2.
Source: Rice field soil collected from Kamisu City, Ibaraki Pref., Japan [12539].
Biochemistry/Physiology: [12539].
G+C (mol%): 41.3 (genome sequence) [12539].
Phylogeny: 16S rRNA gene (LC196061) [12539].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [12539].
Taxonomy: [12712].
Genome sequence: BFAY00000000 [12539].
More information: Polyamine [13792].
  
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Publication(s) using this strain [C19455].
Delivery category: Domestic, A or C; Overseas, A.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leptospira ellinghausenii
JCM number: 32516 <-- T. Masuzawa; Chiba Inst. of Sci., Japan; E18.
Biosafety level 2.
Source: Soil collected from a park in Sukagawa City, Fukushima Pref., Japan [12539].
Biochemistry/Physiology: [12539].
G+C (mol%): 37.4 (genome sequence) [12539].
Phylogeny: 16S rRNA gene (LC196063) [12539].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [12539].
Taxonomy: [12712].
Genome sequence: BFAZ00000000 [12539].
More information: Polyamine [13792].
  
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Publication(s) using this strain [C19455].
Delivery category: Domestic, A or C; Overseas, A.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingobium terrigena
JCM number: 32762 <-- C. O. Jeon; Chung-Ang Univ., South Korea; EO9.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Gasoline-contaminated soil obtained from near a gas station located in Yangju, Kyeonggi Province, the Republic of Korea [12707].
Biochemistry/Physiology: [12707].
Fatty acid: [12707].
Quinone: Q-10 [12707].
Polar lipid: DPG, PE, PC, SGL, PG, PL [12707].
G+C (mol%): 62.8 (genome sequence) [12707].
Phylogeny: 16S rRNA gene (MG745378) [12707].
Other taxonomic data: Polyamine (spermidine) [12707]; Average nucleotide identity, genome-to-genome distances [12707].
Genome sequence: QVRA00000000 [12707].
Publication(s) using this strain [C19272].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Flavobacterium supellecticarium
JCM number: 32838 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-CTC003.
Source: Abandoned furniture (synthetic wooden board) in National Chung Hsing University, Taichung City, Taiwan [13122].
Morphology: [13122].
Biochemistry/Physiology: [13122].
Fatty acid: [13122].
Quinone: MK-6 [13122].
Polar lipid: PE, APLs, ALs, GL [13122].
G+C (mol%): 39.2 (genome sequence) [13122].
Phylogeny: 16S rRNA gene (MH028244) [13122].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances; polyamine (sym-homospermidine) [13122].
Genome sequence: SSNZ00000000 [13122].
Publication(s) using this strain [B20337].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Sneathiella litorea"
JCM number: 33810 <-- C. O. Jeon; Chung-Ang Univ., South Korea; DP05.
Source: Sea sand from Deokpo Beach, South Korea [13739].
Morphology: [13739].
Biochemistry/Physiology: [13739].
Fatty acid: [13739].
Quinone: Q-10 [13739].
Polar lipid: PE, etc. [13739].
G+C (mol%): 51.8 (genome sequence) [13739].
DNA-DNA relatedness: [13739].
Phylogeny: 16S rRNA gene, phylogenomic analysis [13739].
Other taxonomic data: Polyamine (cadaverine) [13739].
Genome sequence: WTUW00000000 [13739].
Publication(s) using this strain [B21046].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Maritimibacter harenae"
JCM number: 33811 <-- C. O. Jeon; Chung-Ang Univ., South Korea; DP07.
Source: Sea sand from Deokpo Beach, South Korea [13739].
Morphology: [13739].
Biochemistry/Physiology: [13739].
Fatty acid: [13739].
Quinone: Q-10 [13739].
Polar lipid: PE, etc. [13739].
G+C (mol%): 66.1 (genome sequence) [13739].
DNA-DNA relatedness: [13739].
Phylogeny: 16S rRNA gene, phylogenomic analysis [13739].
Other taxonomic data: Polyamine (cadaverine) [13739].
Genome sequence: WTUX00000000 [13739].
Publication(s) using this strain [B21046].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Akkermansia muciniphila
JCM number: 33894 <-- DSM 22959 <-- CIP 107961 <-- M. Derrien; Lab. Microbiol, Wageningen Univ., Netherlands; Muc.

Source: Human feces from a healthy adult volunteer, Netherlands [10572].
Biochemistry/Physiology: [10572].
G+C (mol%): 47.6 (HPLC) [10572].
Phylogeny: 16S rRNA gene (AY271254) [10572].
Genome sequence: CP001071.
More information: Mucin-degrading bacterium [10572], 16S rRNA-targeted probe [10573], Polyamine [13792].
  
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Publication(s) using this strain [A22548, A24129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Pseudogemmobacter faecipullorum"
JCM number: 34182 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-YST710.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Poultry manure froma greenhouse, Taichung, Taiwan [14826].
Morphology: [14826].
Biochemistry/Physiology: [14826].
Fatty acid: [14826].
Quinone: Q-10 [14826].
Polar lipid: DPG, PC, PG, PE, etc. [14826].
G+C (mol%): 62.9 (genome sequence) [14826].
DNA-DNA relatedness: [14826].
Phylogeny: 16S rRNA gene, phylogenomic analysis [14826].
Other taxonomic data: Polyamine (spermidine) [14826].
Genome sequence: JACDXX000000000 [14826].
  
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Publication(s) using this strain [C22157].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pyramidobacter porci
JCM number: 34368 <-- B. Abt; DSMZ, Germany; DSM 105193 (=SM-530-WT-4B) <-- T. Clavel; RWTH Aachen, Germany.
Biosafety level 2 (provisional).
Source: Feces of a German Landrace pig (minipig breed) in Freising, Germany [13187].
Biochemistry/Physiology: [13187].
Fatty acid: [13187].
G+C (mol%): 59.6 (genome sequence) [13187].
Phylogeny: 16S rRNA gene (MN537479).
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [13187].
Genome sequence: VUNH00000000.
More information: Polyamine [13792].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Victivallis lenta
JCM number: 34375 <-- B. Abt; DSMZ, Germany; DSM 107290 (=BBE-744-WT-12) <-- T. Clavel; RWTH Aachen, Germany.
Source: Feces of an Aachen minipig in Germany [13187].
Biochemistry/Physiology: [13187].
Fatty acid: [13187].
G+C (mol%): 59.3 (genome sequence) [13187].
Phylogeny: 16S rRNA gene (MN537533).
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [13187].
Genome sequence: VUNS01000000.
More information: Polyamine [13792].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Neopusillimonas aromaticivorans
JCM number: 34761 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-YST667.
Source: Poultry manure from a greenhouse in Taichung, Taiwan [14275].
Morphology: [14275].
Biochemistry/Physiology: [14275].
Fatty acid: [14275].
Polar lipid: DPG, PG, PE, PME, APLs, ALs, PLs, Ls [14275].
G+C (mol%): 57.2 (genome sequence) [14275].
Phylogeny: 16S rRNA gene (MZ453406), concatenated 92 conserved core genes [14275].
Other taxonomic data: Polyamine (spermidine) [14275]; Average amino acid identity, average nucleotide identity, genome-to-genome distances [14275].
Genome sequence: CP128233 [14275].
  
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Publication(s) using this strain [C23345].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Flavobacterium agricola"
JCM number: 34764 <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-SYL302.
Source: Paddy soil, the Taoyuan District Agricultural Research and Extension Station (TYDARES), Taoyuan, Taiwan [14467].
Biochemistry/Physiology: [14467].
Fatty acid: [14467].
Polar lipid: PE, AL, APL [14467].
G+C (mol%): 33.6 (genome sequence) [14467].
Phylogeny: 16S rRNA gene (MZ452988), concatenated 92 conserved core genes [14467].
Other taxonomic data: Polyamine (putrescine and sym-homospermidine); Average amino acid identity, average nucleotide identity, genome-to-genome distances [14467].
Genome sequence: CP081495 [14467].
Production: Auxin [14467].
  
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Publication(s) using this strain [B23024].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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