Strain data

Search for keyword=[ribotyping].
Bifidobacterium longum subsp. longum
JCM number: 1217 <-- ATCC 15707 <-- G. Reuter E194b (Variant a).
Source: Intestine of adult [110,3126,6034].
Biochemistry/Physiology: [3093,3126,4424,5742,6034].
Cell wall: Orn-Ser-Ala-Thr-Ala [098,2925,3126].
Enzyme electrophoretic profile: [3126,4425].
G+C (mol%): 61.4 (Tm) [181], 61.3 (HPLC) [5742].
DNA-DNA relatedness: [023,053,3126,5742,6034].
Phylogeny: 16S rRNA (M58739), 16S rRNA gene (AB437359, GU361823, LC071818).
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597], ribotyping [6034], RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Taxonomy: [3126].
Genome sequence: AP010888 [8490], FNRW00000000, JGYZ00000000, LR134369.
More information: Species-specific primer [4521]; endo-α-N-acetylgalactosaminidase [6623].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07422.
  
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Publication(s) using this strain [A04015, A04071, A04079, A04152, A04168, A04172, A04184, A04196, A05008, A05036, A05048, A05174, A06033, A06239, A07171, A07193, A07210, A07256, A07273, A07284, A08201, A08207, A08225, A08270, A08278, A08304, A09019, A09026, A09198, A09210, A09233, A09240, A09258, A09276, A10101, A10249, A10294, A10313, A11050, A11225, A11235, A11236, A11237, A11252, A11259, A11297, A11362, A12039, A12078, A12287, A12295, A12415, A12422, A12441, A13116, A13170, A13440, A13454, A13457, A13488, A13546, A13553, A14001, A14009, A14079, A14425, A14435, A14451, A14454, A14526, A15097, A15494, A15565, A16074, A16093, A16094, A16131, A16467, A16560, A17103, A17156, B17520, A17566, A18008, A18010, A18039, A18152, A18524, A18564, A18569, A19058, A19084, A19097, A19161, A19166, A19175, A19397, A19403, A19498, A20001, A20093, A20144, A20146, A20172, A20177, A20446, A20477, A20487, A20533, A20554, A20561, A20578, A21057, A21137, A21138, A21153, A21209, A21404, A21417, A21483, A21486, A21512, A21549, A22001, A22036, A22038, A22109, A22111, A22385, A22396, A22477, A22483, A22501, A22548, A23041, A23088, A23092, A23117, A23130, A23150, A23158, A23380, A23453, A23454, A23493, A24048, A24051, A24131, A24157, A24397, A24437, A24466].
Patent publication(s) using this strain [WO2007/023588, WO2007/099997, JP2007-112805A, JP2007-189914A, JP2007-001973A, JP2007-029107A, JP2007-091704A, JP2007-097517A, WO2007/020884, WO2008/062555, WO2008/114503, JP2008-154495A, JP2008-074768A, JP2008-120719A, WO2009/116382, JP2009-183221A, JP2009-242430A, JP2009-125055A, JP2009-027971A, JP2009-173548A, JP2011-219433A, JP2011-157335A, WO2011/027875, WO2011/034181, WO2012/091081 , WO2012/005240, JP2012-12321A, JP2012-158561A, JP2012-180373A, JP2012-180288A, JP2013-233110A, JP2013-027359, JP2014-187886A, JP2014-055194A, JP2014-064543A, JP2014-094001A, JP2014-168404A, 2015-172040, 2015-96555, 2015-198638, 2016-028595, 2016-073314, 2016-168011, CN105671120, WO/2016/208332, WO2016/186151, WO2017/159643, 2017-216979, 2017-175949, 2017-163881, 2017-079705, 2017-066087, 2017-000002, 2017-201984, 2018-113892, 2018-184366, WO2018/074514, 2018-174717, WO2018/174125, WO2018/123507, 2019-151559, 2019-17292, 2019-92469, 2019-94307, 2019-218280, WO2019/087841, 2020-150872, WO2020/040257, 2020-92704, 2020-132560, 2021-65133, 2021-164435, WO2022-050302, WO2022-092018, WO2022-118525, WO2022-137644, 2022-52715, 2022-53525, 2022-88787, 2022-25153, 2022-103708, 2022-42042, 7076840, 2022-33444, WO2022-202372, 2023-150100, 2023-124967, 2023-152713, 7279983, 2023-161983, 2023-33337, 2023-77698, 2023-134550, WO-A1-2024/195814, P2024-165869A, P2024-179871A, P2024-75260A), P2024-32856A, WO-A1-2024/043304].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 1222 <-- ATCC 15697 <-- G. Reuter S12.
Source: Intestine of infant [110,3126,6034].
Biochemistry/Physiology: [3126,4424,5742,6034].
Cell wall: Orn-Ser-Ala-Thr [2925,3126].
Enzyme electrophoretic profile: [3126,4424].
G+C (mol%): 60.8 (Tm) [181].
DNA-DNA relatedness: [023,3126,6034].
Phylogeny: 16S rRNA (M58738), 16S rRNA gene (D86184, LC071820).
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597], ribotyping [6034], RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Taxonomy: [3126].
Genome sequence: AP010889 [8490], CP001095, JDTT00000000, LR134354.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07464.
  
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Publication(s) using this strain [A04018, A04075, A04079, A04196, A05011, A05171, A05174, A06239, A08190, A08304, A09019, A09026, A09198, A10101, A10251, A10294, A11008, A11050, A11074, A11225, A11235, A11236, A11237, A11252, A11297, A11362, A12039, A12062, A12287, A12293, A13116, A13170, A14113, A14435, A15097, A16131, A17126, A18008, A18010, A18039, A18063, A18166, A18411, A18532, A18564, A18569, A19175, A19516, A20144, A20446, A20447, A20487, A21137, A21138, A21153, A21209, A21404, A21417, A21483, A21486, A22109, A22378, A22450, A22487, A22501, A23451, A24048, A24157, A24336, A24339].
Patent publication(s) using this strain [JP2007-001973A, JP2007-029107A, JP2007-112805A, WO2007/020884, WO2007/023588, WO2007/099997, WO2008/062555, JP2009-112214A, JP2009-125055A, JP2009-242430A, JP2010-115126A, WO2011/027875, JP2012-180288A, JP2012-180373A, JP2013-119546A, JP2014-055194A, 2015-198638, 2015-96555, 2017-216979, 2017-031102, 2017-057174, WO2019/087841, WO2020/262413, 2020-92704, 2021-193933, 2021-83433, WO2022-202372, 2023-152713, 2023-150100, WO2023-277041, WO-A1-2024/195814, P2024-179871A, P2024-165869A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 1260 <-- DSM 20218 <-- ATCC 17930 <-- CDC W723 ("Actinomyces parabifidus").
Source: Baby feces [6034].
Biochemistry/Physiology: [4424,6034].
Cell wall: [639].
Enzyme electrophoretic profile: [4425].
DNA-DNA relatedness: [6034].
DNA typing: Ribotyping [6034], RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Publication(s) using this strain [A06239, A09266, A10078, A11362, A13168, A17035, A21417, A23160, A24491].
Patent publication(s) using this strain [WO2012/158517 , WO2013/154725, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. suis
JCM number: 1269 <-- ATCC 27533 <-- D. Matteuzzi SU 859.
Source: Pig feces [122,3126,6034].
Biochemistry/Physiology: [3126,6034].
Cell wall: Orn-Ser-Ala-Thr-Ala [111,2925,3126].
Enzyme electrophoretic profile: [3126].
G+C (mol%): 63.3 (Tm) [122].
DNA-DNA relatedness: [023,058,3126,6034].
Phylogeny: 16S rRNA (M58743), 16S rRNA gene (AB437360, LC071805).
DNA typing: RFLP pattern [4423], ribotyping [6034], RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Genome sequence: JDUC00000000, JGZA00000000.
  
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Publication(s) using this strain [A04018, A05011, A05209, A06239, A11315, A11362, B15603, A20561, A21138].
Patent publication(s) using this strain [JP2007-112805A, WO2022-202372].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 1272 <-- DSM 20090 <-- ATCC 15702 <-- G. Reuter S76E ("Bifidobacterium liberorum").
Source: Intestine of infant [110,3126,6034].
Biochemistry/Physiology: [3126,4424,6034].
Cell wall: [3126].
Enzyme electrophoretic profile: [3126,4425].
G+C (mol%): 60.3 (Tm) [181].
DNA-DNA relatedness: [023,3126,6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Genome sequence: AP043697.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08547.
  
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Publication(s) using this strain [A05036, A06239, A10078, A11362, A13116, A13168, A17035, A18008].
Patent publication(s) using this strain [WO2012/158517 , WO2013/154725, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saccharomonospora viridis
JCM number: 3036 <-- KCC A-0036 <-- NRRL B-3044 <-- E. Küster P-101.
Source: Peat, Ireland [1121].
Morphology: [2799].
Biochemistry/Physiology: [1121,2338,2407,3259].
Numerical taxonomy: [1053].
Cell wall: A2pm [2963], chemotype IV A [1053,1086,2338]; cell wall sugars [3312]; N-acetyl Mur [4176].
Fatty acid: [2338,2377,2383].
Quinone: MK-9(H4), MK-8(H4) [2338,2377].
Polar lipid: [2377].
Enzyme electrophoretic profile: [2407].
G+C (mol%): 69 (Tm) [827], 67.3 (genome sequence) [8211,12227,13513].
DNA-DNA relatedness: [827,2862,4584].
Phylogeny: 16S rRNA gene (X54286, Z38007) [2479,2862,3761], 23S rRNA (X75548) [3588], RNase P RNA gene (AF012805) [4508]; Concatenated 163 conserved core genes [13513].
DNA typing: Restriction pattern of chromosomal DNA [2407], ribotyping [4122], 16S rRNA gene RFLP [4219].
Other taxonomic data: Protein profile [2407]; Ribosomal protein [2932,2962,3656,3947]; 16S-23S rRNA ITS (U73426), 23S-5S rRNA ITS (U73427) [4231]; Average amino acid identity [13513]; Average nucleotide identity [13513]; Genome-to-genome distances [12227,13513].
Taxonomy: [2407,3259].
Genome sequence: CP001683 [8211].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08355.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saccharomonospora azurea
JCM number: 3120 <-- KCC A-0120 <-- CCM 3262 <-- ETH 28747 <-- R. Corbaz 168 (A66).
Source: Moldy hay [726].
Biochemistry/Physiology: [726,2338,2407].
Cell wall: Chemotype IV A [2338].
Fatty acid: [2338].
Quinone: MK-8(H4), MK-9(H4) [2338].
DNA-DNA relatedness: [4584].
Phylogeny: 16S rRNA gene (Z38019) [3761], RNase P RNA gene (AF012794) [4508], 5S rRNA (Z50063).
DNA typing: Ribotyping [4122], 16S rRNA gene RFLP [4219].
Other taxonomic data: 16S-23S rRNA ITS (U73400), 23S-5S rRNA ITS (U73401) [4231].
Taxonomy: [2407,4584].
More information: Proposed type strain of "Thermopolyspora glauca" [726].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis lurida
JCM number: 3141 <-- KCC A-0141 <-- NRRL 2430 <-- Abbott Labs.; NA3-TE19.
Source: Soil, Colorado Springs, CO, USA [1398].
Biochemistry/Physiology: [1795].
Cell wall: Chemotype IV A [744,1795,2355]; cell wall sugars [3312]; N-acetyl Mur [4176].
Fatty acid: [2355].
Quinone: MK-9(H4), MK-9(H2) [1795,2355,4174].
Polar lipid: [2355], type PII [1795].
G+C (mol%): 67 (Tm) [1795], 68.71 (genome sequence) [10507,12227].
DNA-DNA relatedness: [5614].
Phylogeny: 16S rRNA gene (AJ577997) [5620], gyrB (EU822900) [7869].
DNA typing: Ribotyping [5620].
Taxonomy: [5614].
Genome sequence: FNTA00000000, JFBM00000000.
Production: Ristocetins A and B [1118].
Publication(s) using this strain [B18208].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Gordonia sputi
JCM number: 3228 <-- KCC A-0228 <-- M. Tsukamura 3884 (strain Nagura 8539).
Source: Sputa of patients with pulmonary disease [736,2317].
Biochemistry/Physiology: [736,2317,4234].
Numerical taxonomy: [736,2073].
Cell wall: Chemotype IV A [2957]; N-glycolyl Mur [4176].
Fatty acid: [4234].
Quinone: MK-9(H2) [2957].
G+C (mol%): 66.7 (Tm) [2480].
DNA-DNA relatedness: [2480,3590].
Phylogeny: 16S rRNA gene (X80634, X81923) [3591,3951,3956], gyrB (AB438197), secA1 (AB437925) [8445].
DNA typing: Ribotyping [3590].
Other taxonomic data: Mycolic acid [2957,3590,4234,4768]; Ribosomal protein [3947].
Taxonomy: [2434,2957,3590].
Genome sequence: BAFC00000000, JAAXPD000000000.
  
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Patent publication(s) using this strain [WO2007/026860].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis azurea
JCM number: 3275 <-- KCC A-0275 <-- S. Ōmura AM-3696.
Source: Soil, Yamagata Pref., Japan [1166].
Morphology: [2799].
Biochemistry/Physiology: [1166,2355].
Cell wall: Chemotype IV A [1166,2355]; cell wall sugars [3312]; N-acetyl Mur [4176].
Fatty acid: [2355,2377,4987].
Quinone: MK-9(H4), MK-9(H2) [2355,2377,4174].
Polar lipid: Type PII [2355,2377].
G+C (mol%): 66 (Tm) [2355], 68.9 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (AJ400709, X53199) [2479,2862,4987], gyrB (EU822888) [7869].
DNA typing: Ribotyping [5620].
Other taxonomic data: Ribosomal protein [2932,3656].
Genome sequence: ANMG00000000, MUXN00000000.
Production: Azureomycin [1166].
Application: Bioconversion of AS1387392 [9408,9409].
  
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Publication(s) using this strain [A10288, A10289, B18208].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis orientalis
JCM number: 4235 <-- KCC S-0235 <-- Y. Okami (NIHJ 483) <-- ISP 5040 <-- R. C. Pittenger and R. B. Brigham M43-05865.
Source: Soil, Orient [1240].
Morphology: [2799].
Biochemistry/Physiology: [740,1795,1983].
Numerical taxonomy: [760,987].
Cell wall: Chemotype IV A [1795,2355]; N-acetyl Mur [2355,4176]; cell wall sugars [3312].
Fatty acid: [2355,4987].
Quinone: MK-9(H4), MK-9(H2) [1795,2355,4174].
Polar lipid: [2355], type PII [1795].
G+C (mol%): 66 (Tm) [1795,2816], 69.0 (genome sequence) [9593,12227].
DNA-DNA relatedness: [2862].
Phylogeny: 16S rRNA gene (AJ400711, D86935, X76958) [3545,4183,4987], 5S rRNA (Z50061), gyrB (EU822906) [7869].
DNA typing: Ribotyping [5620].
Other taxonomic data: Ribosomal protein [2932,3656].
Genome sequence: ASJB00000000 [9593].
Production: Vancomycin [1111,1240].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermoviolaceus subsp. apingens
JCM number: 4312 <-- KCC S-0312 <-- A. Henssen R89 (A34).
Source: Fresh horse-swine mixed manure, Berlin, Germany [702].
Morphology: [1539].
Biochemistry/Physiology: [220].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (AB184685, Z68095) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Polyamine [2349].
Genome sequence: BMSR00000000.
Publication(s) using this strain [A24373].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermoviolaceus subsp. thermoviolaceus
JCM number: 4337 <-- KCC S-0337 <-- A. Henssen R77.
Source: Fresh horse-swine mixed manure, Berlin, Germany [702].
Morphology: [1539].
Biochemistry/Physiology: [693,4555].
Numerical taxonomy: [760,2933].
Quinone: MK-9(H6), MK-9(H8) [2332].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (AB184371, AB184545, Z68096) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Ribosomal protein [3785].
Genome sequence: BMVZ00000000.
Publication(s) using this strain [A04040].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermovulgaris
JCM number: 4338 <-- KCC S-0338 <-- A. Henssen R10.
Source: Fresh cow manure, Berlin, Germany [702].
Biochemistry/Physiology: [685].
Numerical taxonomy: [760,2381,2933,4207].
Quinone: MK-9(H8) [4555].
Polar lipid: PE, DPG, PI, PIDM [4555].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (Z68094) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Ribosomal protein [3785]; Polyamine [2349].
Genome sequence: MUME00000000.
Publication(s) using this strain [A04040].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermovulgaris
JCM number: 4520 <-- KCC S-0520 <-- IFO 13089 <-- SAJ <-- ISP 5444 <-- A. Henssen R10.
Source: Fresh cow manure, Berlin, Germany [702].
Biochemistry/Physiology: [685].
Numerical taxonomy: [760,2381,2933,4207].
Quinone: MK-9(H8) [4555].
Polar lipid: PE, DPG, PI, PIDM [4555].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (Z68094) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Ribosomal protein [3785]; Polyamine [2349].
Genome sequence: MUME00000000.
Publication(s) using this strain [A04219].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis orientalis
JCM number: 4600 <-- KCC S-0600 <-- IFO 12806 <-- SAJ <-- ISP 5040 <-- R. C. Pittenger and R. B. Brigham M43-05865.
Source: Soil, Orient [1240].
Biochemistry/Physiology: [740,1795,1983].
Numerical taxonomy: [760,987].
Cell wall: Chemotype IV A [1795,2355]; N-acetyl Mur [2355,4176]; cell wall sugars [3312].
Fatty acid: [2355,4987].
Quinone: MK-9(H4), MK-9(H2) [1795,2355,4174].
Polar lipid: [2355], type PII [1795].
G+C (mol%): 66 (Tm) [1795,2816], 69.0 (genome sequence) [9593,12227].
DNA-DNA relatedness: [2865].
Phylogeny: 16S rRNA gene (AJ400711, D86935, X76958) [3545,4183,4987], 5S rRNA (Z50061), gyrB (EU822906) [7869].
DNA typing: Ribotyping [5620].
Other taxonomic data: Ribosomal protein [2932,3656].
Genome sequence: ASJB00000000 [9593].
Production: Vancomycin [1111,1240].
Publication(s) using this strain [A04007].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis mediterranei
JCM number: 4789 <-- KCC S-0789 <-- IFO 13415 <-- SAJ <-- ISP 5501 <-- ATCC 13685 <-- Lepetit ME/83.
Source: Soil, sea shore of St. Raphael, France [1537].
Biochemistry/Physiology: [693,1795].
Numerical taxonomy: [760,3738].
Cell wall: [3741], chemotype IV A [1795,2355]; N-acetyl Mur [2355,4176]; cell wall sugars [3312].
Fatty acid: [2355,3738].
Quinone: MK-9(H4) [1795,2332,2355,3738,4174].
Polar lipid: [2355], type PII [1795].
G+C (mol%): 67-69 (Tm) [1795], 70 (Tm) [2816], 71.3 (genome sequence) [9592,12227].
Phylogeny: 16S rRNA gene (AJ293754, AY125600, AY184424, X76957) [3545,5762], gyrB (EU822901) [7869].
DNA typing: Ribotyping [5620].
Genome sequence: CP002896 [9592].
Production: Rifamycins [1537].
  
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Publication(s) using this strain [A11216].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermodiastaticus
JCM number: 4840 <-- KCC S-0840 <-- IFO 13468 <-- SAJ <-- ISP 5573 <-- CUB 387 <-- J. R. Denison.
Biochemistry/Physiology: [693].
Numerical taxonomy: [760,2933].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (AB018095, AB018096, AB249928, Z68101) [4123,4789].
DNA typing: Ribotyping [4555].
Other taxonomic data: Polyamine [2349].
Genome sequence: BNBV00000000.
Publication(s) using this strain [A04040, A24373].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermovulgaris
JCM number: 4841 <-- KCC S-0841 <-- IFO 13473 <-- SAJ <-- ISP 5579 <-- ATCC 23385 <-- A. J. Desai NCIM 2007.
Source: Soil, Bombay, India [1548].
Biochemistry/Physiology: [693,1548].
Numerical taxonomy: [760,2381,2933,4207].
Quinone: MK-9(H8) [4555].
Polar lipid: PE, DPG, PI, PIDM [4555].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (Z68098) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Ribosomal protein [3785].
Taxonomy: [4555].
More information: Type strain of Streptomyces thermonitrificans [693].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermoviolaceus subsp. thermoviolaceus
JCM number: 4843 <-- KCC S-0843 <-- IFO 13387 <-- SAJ <-- ISP 5443 <-- A. Henssen R77.
Source: Fresh horse-swine mixed manure, Berlin, Germany [702].
Morphology: [1539].
Biochemistry/Physiology: [693,4555].
Numerical taxonomy: [760,2933].
Quinone: MK-9(H6), MK-9(H8) [2332].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (AB184371, AB184545, Z68096) [4123].
DNA typing: Ribotyping [4555].
Other taxonomic data: Ribosomal protein [3785].
Genome sequence: BMVZ00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis tolypomycina
JCM number: 4936 <-- KCC S-0936 <-- Kyowa Hakko Kogyo Co., Ltd.; KY 1446 <-- ATCC 21177 <-- Takeda Chem. Ind., Ltd.; B2847.
Source: Soil, Tokyo, Japan [1565].
Biochemistry/Physiology: [1565,3738,5483].
Cell wall: meso-A2pm [1565,5483]; cell wall sugars [3312].
Fatty acid: [5483].
Quinone: MK-9(H4) [3738,5483].
Polar lipid: PE, OH-PE, DPG, PI [5483].
G+C (mol%): 71.7 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (AJ293757, AJ508241) [5483], gyrB (EU822917) [7869].
DNA typing: Ribotyping [5483].
Genome sequence: FNSO00000000.
More information: Proposed type strain of "Streptomyces tolypophorus" [1565].
Production: Tolypomycin [1565].
Publication(s) using this strain [A24331].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Gordonia sputi
JCM number: 6047 <-- M. Tsukamura E6324 (=61001).
Source: Human sputa [2073].
Biochemistry/Physiology: [2073,3590].
Numerical taxonomy: [2073].
DNA-DNA relatedness: [3590].
Phylogeny: 16S rRNA gene (X80627, X81927) [3951,3956].
DNA typing: Ribotyping [3590].
Other taxonomic data: Mycolic acid [3590,4768].
Taxonomy: [3590].
More information: Type strain of Rhodococcus chubuensis [133,2073].
Patent publication(s) using this strain [WO2007/026860].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 7007 <-- Y. Benno <-- T. Mitsuoka IV-7 (21143 I-63-7).
Source: Feces of a human infant [6034].
Biochemistry/Physiology: [6034].
DNA-DNA relatedness: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
  
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Publication(s) using this strain [A05036, A06239, A07219, A08190, A09266, A10078, A10251, A11362, A12329, A13168, A13169, A15588, A17035].
Patent publication(s) using this strain [WO2009/116382, WO2012/158517 , WO2013/154725, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 7009 <-- Y. Benno <-- T. Mitsuoka IV-9 (30127 I-18-4).
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
Publication(s) using this strain [A06239, A09266, A10078, A11362, A12329, A13168, A15141, A15588, A23160].
Patent publication(s) using this strain [WO2012/158517 , WO2013/154725].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 7010 <-- Y. Benno <-- T. Mitsuoka IV-10 (15075 I-10-5).
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
  
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Publication(s) using this strain [A06239, A09266, A10078, A11362, A13168].
Patent publication(s) using this strain [WO2012/158517 , WO2013/154725].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 7011 <-- Y. Benno <-- T. Mitsuoka IV-11 (30125 I-14-2).
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
Publication(s) using this strain [A06239, A09266, A10078, A11362, A12329, A13168, A15588].
Patent publication(s) using this strain [WO2012/158517 , WO2013/154725].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 7050 <-- Y. Benno <-- T. Mitsuoka IV-50 (I-15-7).
Source: Human feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
  
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Publication(s) using this strain [A04067, A05016, A06012, A06239, A08226, A11317, A11362, A13442, A15579, A21138, A22456].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 7052 <-- T. Mitsuoka IV-52.
Source: Human feces [6034].
Biochemistry/Physiology: [6034].
Phylogeny: 16S rRNA gene (LC589223).
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
More information: L-Lactate dehydrogenase gene (M33585).
  
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Publication(s) using this strain [A04079, A05016, A06012, A06239, A07273, A09240, A10254, A10255, A11317, A11362, A12012, A12388, A13442, A17559, A18008, A21057, A21412, A21480, A22109].
Patent publication(s) using this strain [WO2007/099997, JP2014-064543A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 7053 <-- Y. Benno <-- T. Mitsuoka IV-53 (Kd-5-6).
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
  
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Publication(s) using this strain [A05016, A06012, A06239, A07273, A08190, A09240, A10251, A11317, A11362, A13442, A17559, A19483, A21056, A22109].
Patent publication(s) using this strain [WO2007/099997].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 7054 <-- T. Mitsuoka IV-54 <-- G. Reuter S3 (Variant b).
Source: Intestine of infant [6034].
Biochemistry/Physiology: [4424,6034].
Enzyme electrophoretic profile: [4425].
DNA-DNA relatedness: [6034].
Phylogeny: 16S rRNA gene (U10152).
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597], ribotyping [6034], RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
  
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Publication(s) using this strain [A05174, A06239, A07219, A07273, A08190, A09026, A09198, A10101, A10251, A11236, A11237, A11362, A13116, A13170, A14435, A15097, A22109].
Patent publication(s) using this strain [WO2007/099997].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 7055 <-- Y. Benno <-- T. Mitsuoka IV-55 (I-54-2).
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
  
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Publication(s) using this strain [A05016, A06012, A06239, A07273, A09240, A11362, A22109].
Patent publication(s) using this strain [WO2007/099997].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 7056 <-- Y. Benno <-- T. Mitsuoka IV-56 (I-13-12).
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: MALDI-TOF MS [9230].
  
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Publication(s) using this strain [A05016, A06012, A06239, A07273, A09240, A11317, A11362, A13442, A22109].
Patent publication(s) using this strain [WO2007/099997].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. suis
JCM number: 7139 <-- T. Mitsuoka IV-139 <-- ATCC 27532 <-- D. Matteuzzi SU 901.
Source: Pig feces [122,6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping, RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Publication(s) using this strain [A06239, A11362, B15603].
Patent publication(s) using this strain [P2024-59594A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saccharomonospora glauca
JCM number: 7444 <-- H. J. Kutzner K62.
Biochemistry/Physiology: [2407].
Cell wall: meso-A2pm; Ara, Gal [2407], cell wall sugars [3312].
Fatty acid: [2407].
Quinone: MK-9(H4), MK-8(H4) [2407].
Polar lipid: [2407].
Enzyme electrophoretic profile: [2407].
G+C (mol%): 69.1 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (Z38003) [3761], RNase P RNA gene (AF012799) [4508], 5S rRNA (Z50068).
DNA typing: Ribotyping [4122], 16S rRNA gene RFLP [4219].
Other taxonomic data: Protein profile [2407]; Ribosomal protein [2932,3656]; 16S-23S rRNA ITS (U73404), 23S-5S rRNA ITS (U73405) [4231].
Genome sequence: CM001484.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saccharomonospora azurea
JCM number: 7551 <-- R. Hu NA-128.
Source: Soil, Guangyuan City, Sichuan, China [2336].
Biochemistry/Physiology: [2336].
Cell wall: Chemotype IV A [2336]; cell wall sugars [3312].
G+C (mol%): 70.08 (genome sequence) [4675,12227].
Phylogeny: 16S rRNA gene (Z38017) [3761], RNase P RNA gene (AF012792) [4508].
DNA typing: Ribotyping [4122], 16S rRNA gene RFLP [4219].
Other taxonomic data: 16S-23S rRNA ITS (U73397), 23S-5S rRNA ITS (U73398, U73399) [4231].
Genome sequence: AGIU00000000 [9114].
More information: β-Lactamase activity [4675].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saccharomonospora cyanea
JCM number: 7552 <-- R. Hu NA-134.
Source: Soil, Guangyuan City, Sichuan, China [2552].
Biochemistry/Physiology: [2552].
Cell wall: Chemotype IV A [2552]; cell wall sugars [3312].
G+C (mol%): 69.74 (genome sequence) [9785,12227].
Phylogeny: 16S rRNA gene (Z38018) [3761], RNase P RNA gene (AF012804) [4508], 5S rRNA (Z50065).
DNA typing: Ribotyping [4122], 16S rRNA gene RFLP [4219].
Other taxonomic data: 16S-23S rRNA ITS (U73402), 23S-5S rRNA ITS (U73403) [4231].
Genome sequence: CM001440 [9785].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis japonica
JCM number: 10140 <-- M. Hamada MG417-CF17 (IMC A-0199).
Biochemistry/Physiology: [4268].
Cell wall: meso-A2pm; Ara, Gal (chemotype IV) [4268].
Fatty acid: [4268].
Quinone: MK-9(H4) [4268].
Polar lipid: Type PII (DPG, PE, PG, PI, PIM) [4268].
G+C (mol%): 68.89 (genome sequence) [10506].
Phylogeny: 16S rRNA gene (AJ508236, X77959) [4268,5620], gyrB (EU822896) [7869]; Concatenated 163 conserved core genes [13513].
DNA typing: Ribotyping [5620].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances [13513].
Genome sequence: CP008953, CP008954 (plasmid pAmyja1) [10506].
Production: (S,S)-N,N'-Ethylenediaminedisuccinic acid (an inhibitor of phospholipase C) [4268,4269].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium imitans
JCM number: 10386 <-- CCUG 36877 <-- G. Funke DMMZ 2023 <-- A. Efstratiou.
Source: Human throat, Poland [4372].
Biochemistry/Physiology: [4372].
Cell wall: meso-A2pm [4372].
Fatty acid: n-C16:0, n-C18:0, n-C18:1ω9c [4372].
G+C (mol%): 62 (HPLC) [4372], 64.3 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (Y09044) [4372].
DNA typing: Ribotyping [4372].
Other taxonomic data: Mycolic acid [4372].
Genome sequence: CP009211 [10538], LT906467.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium afermentans subsp. afermentans
JCM number: 10390 <-- CIP 103499 <-- P. Riegel <-- P. E. Ewan LCDC 88199.
Biosafety level 2.
Source: Human blood culture, Canada [4367].
Biochemistry/Physiology: [4367].
Cell wall: meso-A2pm; Ara, Gal [4367].
G+C (mol%): 66 (HPLC) [4367,5439], 64.9 (genome sequence) [12227].
DNA-DNA relatedness: [4367].
Phylogeny: 16S rRNA gene (X82054) [3956], rpoB (AY492265) [10267].
DNA typing: Ribotyping [4367].
Other taxonomic data: Mycolic acid (C26-36) [4367].
Genome sequence: FTMH00000000, LXGG00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium afermentans subsp. lipophilum
JCM number: 10391 <-- CIP 103500 <-- P. Riegel T18502.
Biosafety level 2.
Source: Human blood culture, Strasbourg, France [4367].
Biochemistry/Physiology: [4367].
Cell wall: meso-A2pm; Ara, Gal [4367].
G+C (mol%): 68 (HPLC) [4367,5439].
DNA-DNA relatedness: [4367].
Phylogeny: 16S rRNA gene (X82055) [3956], rpoB (AY492266) [10267].
DNA typing: Ribotyping [4367].
Other taxonomic data: Mycolic acid (C26-36) [4367].
Genome sequence: JADKMZ00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces thermoalcalitolerans
JCM number: 10673 <-- DSM 41741 <-- M. Goodfellow TA56 <-- N. Sahin.
Source: Garden soil, Yogyakarta, Indonesia [4555].
Biochemistry/Physiology: [4555].
Cell wall: LL-A2pm [4555].
Quinone: MK-9(H8) [4555].
Polar lipid: PE, DPG, PI, PIDM [4555].
G+C (mol%): 73 (HPLC) [4555].
DNA-DNA relatedness: [4555].
Phylogeny: 16S rRNA gene (AB249909, AJ000284) [4555].
DNA typing: Ribotyping [4555].
Genome sequence: BAAAHG010000000.
Publication(s) using this strain [A24373].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Gordonia alkanivorans
JCM number: 10677 <-- DSM 44369 <-- C. Kummer HKI 0136.
Source: Tar- and phenol-contaminated soil of the former tar factory, Rositz, Germany [4651].
Biochemistry/Physiology: [4651].
Cell wall: meso-A2pm [4651].
Fatty acid: [4651].
Quinone: MK-9(H2), MK-8(H2) [4651].
G+C (mol%): 68 (HPLC) [4651].
DNA-DNA relatedness: [4651].
Phylogeny: 16S rRNA gene (Y18054) [4651], gyrB (AB075553, AB438179), secA1 (AB437906) [8445].
DNA typing: Ribotyping [4651].
Other taxonomic data: Mycolic acid [4651].
Genome sequence: BACI00000000.
  
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Publication(s) using this strain [A23355].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Janibacter terrae
JCM number: 10705 <-- J.-H. Yoon CS12.
Source: Soil around a wastewater treatment plant, South Korea [4801].
Biochemistry/Physiology: [4801,5590].
Cell wall: meso-A2pm [4801].
Fatty acid: [4801,5590].
Quinone: MK-8(H4) [4801].
G+C (mol%): 69 (HPLC) [4801].
DNA-DNA relatedness: [4801,5590].
Phylogeny: 16S rRNA gene (AF176948) [4801].
DNA typing: Ribotyping [5590].
Taxonomy: Emended description [5590].
Genome sequence: BCUV00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Janibacter limosus
JCM number: 10980 <-- IFO 16128 <-- DSM 11140 <-- K. Martin HKI 83.
Source: 1-Year-old sludge from a wastewater treatment plant near Jena, Germany [4799].
Biochemistry/Physiology: [4799,5590].
Cell wall: meso-A2pm, Glu, Ala (type A1γ); N-acetyl Mur [4799].
Fatty acid: [4799,5590].
Quinone: MK-8(H4) [4799].
Polar lipid: DPG, PG, PI [4799].
G+C (mol%): 70 (HPLC) [4799].
DNA-DNA relatedness: [4799].
Phylogeny: 16S rRNA gene (Y08539) [4799].
DNA typing: Ribotyping [5590].
Genome sequence: BCSS00000000.
Publication(s) using this strain [A04025].
Patent publication(s) using this strain [JP2013-169190A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Gordonia alkanivorans
JCM number: 11273 <-- DSM 44499 <-- Y.-H. Park LE31.
Source: Industrial wastewater, Taegu, South Korea [4973].
Biochemistry/Physiology: [4973].
Cell wall: meso-A2pm; Ara, Gal (chemotype IV) [4973].
Fatty acid: [4973].
Quinone: MK-9(H2) [4973].
G+C (mol%): 67 (HPLC) [4973].
DNA-DNA relatedness: [4973,5966].
Phylogeny: 16S rRNA gene (AF148947) [4973].
DNA typing: Ribotyping [5966].
Other taxonomic data: Mycolic acid (C47-55) [4973].
Taxonomy: [5966].
More information: Type strain of Gordonia nitida [4973]; Degrades 3-ethylpyridine and 3-methylpyridine [4973].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 11340 <-- Y. Benno B-34.
Source: Feces of a human infant [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping [6034], RAPD-PCR [6034].
  
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Publication(s) using this strain [A18008].
Patent publication(s) using this strain [WO2007/099997, P2024-59594A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 11341 <-- Y. Benno B-41.
Source: Feces of a human infant [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping [6034], RAPD-PCR [6034].
  
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Patent publication(s) using this strain [WO2007/099997].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 11342 <-- Y. Benno B-44.
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
Phylogeny: 16S rRNA gene (LC306854).
DNA typing: Ribotyping [6034], RAPD-PCR [6034].
  
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Patent publication(s) using this strain [P2024-59594A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 11343 <-- Y. Benno B-85.
Source: Feces of a human infant [6034].
Biochemistry/Physiology: [6034].
Phylogeny: 16S rRNA gene (LC638742).
DNA typing: Ribotyping [6034], RAPD-PCR [6034].
Publication(s) using this strain [A22109].
Patent publication(s) using this strain [WO2007/099997].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 11344 <-- Y. Benno M-139.
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping [6034], RAPD-PCR [6034].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 11345 <-- Y. Benno M-140.
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping [6034], RAPD-PCR [6034].
  
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Patent publication(s) using this strain [P2024-59594A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 11347 <-- Y. Benno M-193.
Source: Infant feces [6034].
Biochemistry/Physiology: [6034].
DNA typing: Ribotyping [6034], RAPD-PCR [6034].
Publication(s) using this strain [A09266, A10078, A13168, A17035].
Patent publication(s) using this strain [WO2012/158517 , WO2013/154725].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudomonas kilonensis
JCM number: 11939 <-- DSM 13647 <-- J. Sikorski 520-20.
Source: Agricultural soil, near Kiel, Germany [5389].
Biochemistry/Physiology: [5389].
G+C (mol%): 59.9 (HPLC) [5389].
DNA-DNA relatedness: [5389].
Phylogeny: 16S rRNA gene (AJ292426) [5389].
DNA typing: Ribotyping [5389].
Genome sequence: LHVH00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus paracollinoides
JCM number: 11969 <-- K. Suzuki LA2.
Source: Brewery environment [5683].
Biochemistry/Physiology: [5683,7492].
G+C (mol%): 44.8 (HPLC) [5683], 46.8 (genome sequence) [12937].
DNA-DNA relatedness: [5683,7492].
Phylogeny: 16S rRNA gene (E16651, LC483558) [5683].
DNA typing: Ribotyping [7492].
Other taxonomic data: Beer-spoilage ability [5683,7492]; Specific PCR primers [5959,7492,7493]; Hop resistance [7563]; Rapid detection [7763].
Taxonomy: [5960].
Genome sequence: AZFD00000000 [12937], BBAG00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12543.
  
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Publication(s) using this strain [B04084, A07246, A07251, A10149, A10316, B11210, B13281, B13387, B15270, B17320, A21452, A23529].
Patent publication(s) using this strain [WO2007/111210, JP2008-263971A, JP2010-081935A].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium propinquum
JCM number: 12106 <-- CCUG 33048 <-- P. Riegel B 77159.
Source: Human respiratory tract.
Biochemistry/Physiology: [5439].
Cell wall: meso-A2pm; Ara, Gal [5439].
G+C (mol%): 57 (HPLC) [5439].
DNA-DNA relatedness: [5439].
Phylogeny: 16S rRNA gene (JX476064, X81917, X84438) [3956,3961,9591].
DNA typing: Ribotyping [5439].
Other taxonomic data: Mycolic acid (C28-36) [5439]; MALDI-TOF MS [9591].
Taxonomy: [9591].
Genome sequence: AQXC00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12424 <-- M. Kitahara and Y. Benno F3-19.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306956).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12425 <-- M. Kitahara and Y. Benno F3-17.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306957).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12426 <-- M. Kitahara and Y. Benno F3-18.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306958).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12427 <-- M. Kitahara and Y. Benno F3-20.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306959).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12428 <-- M. Kitahara and Y. Benno B2-22.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306960).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12429 <-- M. Kitahara and Y. Benno B2-20.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306961).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12430 <-- M. Kitahara and Y. Benno B2-12.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306962).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12431 <-- M. Kitahara and Y. Benno D3-3.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306963).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12432 <-- M. Kitahara and Y. Benno D3-5.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306964).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12433 <-- M. Kitahara and Y. Benno E3-13.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC306965).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12434 <-- M. Kitahara and Y. Benno C2-38.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311074).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12435 <-- M. Kitahara and Y. Benno C2-40.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311075).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12436 <-- M. Kitahara and Y. Benno C2-41.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311076).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12437 <-- M. Kitahara and Y. Benno D3-6.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311077).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12438 <-- M. Kitahara and Y. Benno D3-2.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311078).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12439 <-- M. Kitahara and Y. Benno D3-1.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311079).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12440 <-- M. Kitahara and Y. Benno C2-46.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311080).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12441 <-- M. Kitahara and Y. Benno E3-8.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311081).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12442 <-- M. Kitahara and Y. Benno F3-23.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311082).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12443 <-- M. Kitahara and Y. Benno F3-21.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311083).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructilactobacillus sanfranciscensis
JCM number: 12444 <-- M. Kitahara and Y. Benno F3-26.
Source: Sourdough [6027].
Phylogeny: 16S rRNA gene (LC311084).
DNA typing: Ribotyping [6027].
  
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Publication(s) using this strain [B05206].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lentilactobacillus parabuchneri
JCM number: 12511 <-- CIP 106749 <-- F. G. Priest R7-84.
Source: Late fermentation sample from a malt whiskey distillery [5693].
Biochemistry/Physiology: [5693,6151].
G+C (mol%): 43 (HPLC) [6151].
DNA-DNA relatedness: [5693,6151].
Phylogeny: 16S rRNA gene (AF275311).
DNA typing: Ribotyping [5693], FAFLP [6151].
Taxonomy: [6151].
More information: Type strain of Lactobacillus ferintoshensis [5693,8236].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces aureus
JCM number: 12605 <-- NCIMB 13927 <-- M. Goodfellow B7319.
Source: Soil from meadow hay plots, UK [5731].
Biochemistry/Physiology: [5731].
G+C (mol%): 69 (Tm) [5731].
DNA-DNA relatedness: [5731].
Phylogeny: 16S rRNA gene (AB249976, AY094368) [5731,7602].
DNA typing: Ribotyping [5731].
Genome sequence: BAAAKQ010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces niveus
JCM number: 12606 <-- NCIMB 13928 <-- M. Goodfellow C7654.
Source: Soil from meadow hay plots, UK [5731].
Biochemistry/Physiology: [5731].
G+C (mol%): 70 (Tm) [5731].
DNA-DNA relatedness: [5731,7538].
Phylogeny: 16S rRNA gene (AB249944, AY094367) [5731,7602].
DNA typing: Ribotyping [5731].
Other taxonomic data: MALDI-TOF MS [7538].
Taxonomy: [7538].
More information: Type strain of Streptomyces laceyi [5731,12297].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces sanglieri
JCM number: 12607 <-- NCIMB 13929 <-- M. Goodfellow A46R51.
Source: Soil from meadow hay plots, UK [5731].
Biochemistry/Physiology: [5731].
G+C (mol%): 74 (Tm) [5731].
DNA-DNA relatedness: [5731].
Phylogeny: 16S rRNA gene (AB249945, U22974) [5731].
DNA typing: Ribotyping [5731].
Genome sequence: BAAAKR010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Tsukamurella spumae
JCM number: 12608 <-- NCIMB 13947 <-- M. Goodfellow N1171.
Source: Activated sludge foam, near Nottingham, UK [5732].
Biochemistry/Physiology: [5732].
Cell wall: meso-A2pm; Ara, Gal; N-glycolyl Mur [5732].
Fatty acid: Type 1b [5732].
Quinone: MK-9 [5732].
DNA-DNA relatedness: [5732].
Phylogeny: 16S rRNA gene (Z37150) [5732].
DNA typing: Ribotyping [5732].
Other taxonomic data: Mycolic acid (C68-78) [5732].
Genome sequence: BAAAKS010000000, JAAXOQ000000000.
Publication(s) using this strain [A11017, A11026, B16284, B16439, A18116, B18392, B20234].
Patent publication(s) using this strain [JP2008-054637A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis balhimycina
JCM number: 12668 <-- DSM 44591 <-- J. Wink FH 1894 <-- Höchst India Ltd.
Source: Soil, India [5483].
Biochemistry/Physiology: [5483].
Cell wall: meso-A2pm; Ara, Gal [5483].
Fatty acid: [5483].
Quinone: MK-9(H4) [5483].
Polar lipid: PE, OH-PE, DPG, PI [5483].
G+C (mol%): 70.8 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (AJ508239) [5483], gyrB (EU822889) [7869].
DNA typing: Ribotyping [5483].
Genome sequence: ARBH00000000.
Production: Balhimycin [5483].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis decaplanina
JCM number: 12669 <-- DSM 44594 <-- J. Wink FH 1845 <-- Höchst India Ltd.
Source: Soil, India [5620].
Biochemistry/Physiology: [5620].
Cell wall: meso-A2pm; Ara, Gal [5620].
Fatty acid: [5620].
Quinone: MK-8(H4), MK-9(H4) [5620].
Polar lipid: DPG, PG, PE, OH-PE, PI, PIM [5620].
G+C (mol%): 68.6 (genome sequence) [9562,12227].
DNA-DNA relatedness: [5620].
Phylogeny: 16S rRNA gene (AJ508237) [5620], gyrB (EU822891) [7869].
DNA typing: Ribotyping [5620].
Genome sequence: AOHO00000000 [9562].
Production: Decaplanin [5620].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis keratiniphila
JCM number: 12671 <-- DSM 44586 <-- J. Wink FH 1893 <-- Höchst India Ltd.
Source: Soil, India [5483].
Biochemistry/Physiology: [5483].
Cell wall: meso-A2pm; Ara, Gal [5483].
Fatty acid: [5483].
Quinone: MK-9(H4) [5483].
Polar lipid: PE, OH-PE, DPG, PI [5483].
Phylogeny: 16S rRNA gene (AJ508238) [5483], gyrB (EU822899) [7869].
DNA typing: Ribotyping [5483].
Other taxonomic data: Genome-to-genome distances [12227].
Taxonomy: [12227,12363].
Genome sequence: LT629789, MQUP00000000.
More information: Type strain of Amycolatopsis keratiniphila subsp. nogabecina [5483,12296].
Production: Nogabecin [5483].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Amycolatopsis vancoresmycina
JCM number: 12675 <-- DSM 44592 <-- J. Wink ST 101170.
Source: Soil, India [5483].
Biochemistry/Physiology: [5483].
Cell wall: meso-A2pm; Ara, Gal [5483].
Fatty acid: [5483].
Quinone: MK-9(H4) [5483].
Polar lipid: PE, OH-PE, DPG, PI [5483].
G+C (mol%): 72.0 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (AJ508240) [5483], gyrB (EU822918) [7869].
DNA typing: Ribotyping [5483].
Genome sequence: AOUO00000000, JNYY00000000.
Production: Vancoresmycin [5483].
Publication(s) using this strain [A23204].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Janibacter terrae
JCM number: 12887 <-- IAM 14781 <-- Y. Imamura 10N.
Source: Contaminated groundwater, Japan [5855].
Biochemistry/Physiology: [5590,5855].
Cell wall: meso-A2pm; N-acetyl Mur [5855].
Fatty acid: [5590,5855].
Quinone: MK-8(H4) [5855].
G+C (mol%): 72 (HPLC) [5855].
DNA-DNA relatedness: [5590,5855].
Phylogeny: 16S rRNA gene (AB016438, AJ310085) [5590,5855].
DNA typing: Ribotyping [5590].
Taxonomy: [5590].
Genome sequence: BDAR00000000.
More information: Type strain of Janibacter brevis [5855]; Degrades trichloroethylene [5855].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12696.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mycolicibacterium murale
JCM number: 13392 <-- CCUG 39728 <-- M. Salkinoja-Salonen MA112/96.
Source: Water-damaged indoor building material of a children's day care center, Finland [6111].
Biochemistry/Physiology: [6111].
Cell wall: meso-A2pm [6111].
Fatty acid: [6111].
Quinone: MK-9(H2) (90%), MK-8(H2) (10%) [6111].
Polar lipid: PE, PI, PIM, DPG [6111].
G+C (mol%): 72.9 (HPLC) [6111].
Phylogeny: 16S rRNA gene (AB537171, HM770863).
DNA typing: Ribotyping [6111].
Other taxonomic data: Mycolic acid (C60-90) [6111]; Polyamine [6111].
Taxonomy: [12055].
Genome sequence: BAAAMC010000000, BLKT00000000.
  
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Publication(s) using this strain [A13538, A18115, A19141, A21353].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Salana multivorans
JCM number: 13524 <-- DSM 13521 <-- F. von Wintzingerode Se-3111.
Source: Anaerobic, trichlorobenzene-dechlorinating consortium enriched from sediment of the River Saale, near Jena, Germany [6228].
Biochemistry/Physiology: [6228].
Cell wall: L-Orn-L-Glu [6228].
Fatty acid: [6228].
Quinone: MK-8(H4) [6228].
Polar lipid: PG, DPG [6228].
G+C (mol%): 75 (HPLC) [6228].
Phylogeny: 16S rRNA gene (AJ400627) [6228].
DNA typing: Ribotyping [6228].
Genome sequence: RKHQ00000000.
More information: Anaerobic reduction of selenate [6228].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mycolicibacterium septicum
JCM number: 14743 <-- CIP 106642 <-- J. M. Brown W4964 <-- G. G. Hogg.
Biosafety level 2.
Source: Catheter tip of centrally located Hickman catheter, Melbourne, Australia [6877].
Biochemistry/Physiology: [6877].
G+C (mol%): 64 (Tm) [6877], 66.7 (genome sequence) [12227].
DNA-DNA relatedness: [6877].
Phylogeny: 16S rRNA gene (AF111809, AY457070) [6877,7312], rpoB (AY147167) [8692].
DNA typing: Ribotyping [6877].
Other taxonomic data: Mycolic acid [6877].
Taxonomy: [12055].
Genome sequence: CBMO000000000, JAAXPJ000000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mycolicibacterium boenickei
JCM number: 15653 <-- CIP 107829 <-- G. Goolsby W5998 <-- R. J. Wallace Mf-657 <-- J. R. Roche.
Biosafety level 2.
Source: Leg wound, USA [7460].
Biochemistry/Physiology: [7460].
G+C (mol%): 64 (Tm) [7460], 66.8 (genome sequence) [12227].
DNA-DNA relatedness: [7460].
Phylogeny: 16S rRNA gene (AY012573) [7460].
DNA typing: Ribotyping [7460].
Taxonomy: [12055].
Genome sequence: FUWC00000000.
  
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Publication(s) using this strain [A18115, A19141].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mycolicibacterium brisbanense
JCM number: 15654 <-- CIP 107830 <-- G. Goolsby W6743 <-- R. J. Wallace Mf-614 <-- J. M. Blacklock.
Biosafety level 2.
Source: Antral sinus, Brisbane, Australia [7460].
Biochemistry/Physiology: [7460].
G+C (mol%): 62 (Tm) [7460].
DNA-DNA relatedness: [7460].
Phylogeny: 16S rRNA gene (AY012577) [7460].
DNA typing: Ribotyping [7460].
Taxonomy: [12055].
Genome sequence: BCSX00000000 [11536].
  
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Publication(s) using this strain [A18115].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mycolicibacterium houstonense
JCM number: 15656 <-- CIP 107828 <-- G. Goolsby W5198 <-- R. J. Wallace Mf-89.
Biosafety level 2.
Source: Face wound, Houston, TX, USA [7460].
Biochemistry/Physiology: [7460].
G+C (mol%): 64 (Tm) [7460], 67.0 (genome sequence) [12227].
DNA-DNA relatedness: [7460].
Phylogeny: 16S rRNA gene (AY012579, LT223693) [7460].
DNA typing: Ribotyping [7460].
Taxonomy: [12055].
Genome sequence: FJVO00000000.
  
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Publication(s) using this strain [A18115, A21181].
Patent publication(s) using this strain [2019-97493].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mycolicibacterium neworleansense
JCM number: 15659 <-- CIP 107827 <-- G. Goolsby W6705 <-- R. J. Wallace Mf-465 <-- G. Bedsole <-- Charity Hosp., New Orleans, USA.
Biosafety level 2.
Source: Scalp wound, New Orleans, LA, USA [7460].
Biochemistry/Physiology: [7460].
G+C (mol%): 60 (Tm) [7460], 66.8 (genome sequence) [12227].
DNA-DNA relatedness: [7460].
Phylogeny: 16S rRNA gene (AY012575) [7460].
DNA typing: Ribotyping [7460].
Taxonomy: [12055].
Genome sequence: CWKH00000000.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus paracollinoides
JCM number: 15728 <-- K. Suzuki LA3.
Source: Brewery environment [5683,7492].
Biochemistry/Physiology: [7492].
DNA-DNA relatedness: [7492].
Phylogeny: 16S rRNA gene (AB473625, LC311085).
DNA typing: Ribotyping [7492].
Other taxonomic data: Beer-spoilage ability [5683,7492]; Specific PCR primers [5959,7492,7493]; Hop resistance [7563]; Rapid detection [7763].
Taxonomy: [12937].
  
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Publication(s) using this strain [A10149, A23529].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus paracollinoides
JCM number: 15729 <-- K. Suzuki LA4.
Source: Brewery environment [5683,7492].
Biochemistry/Physiology: [7492].
DNA-DNA relatedness: [7492].
Phylogeny: 16S rRNA gene (AB473626, LC311086).
DNA typing: Ribotyping [7492].
Other taxonomic data: Beer-spoilage ability [5683,7492]; Specific PCR primers [5959,7492,7493]; Hop resistance [7563]; Rapid detection [7763].
Taxonomy: [12937].
  
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Publication(s) using this strain [A10149, A10316, A21452].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus paracollinoides
JCM number: 15730 <-- K. Suzuki LA7.
Source: Brewery environment [5683].
DNA-DNA relatedness: [5683].
Phylogeny: 16S rRNA gene (AB473627, LC311087).
DNA typing: Ribotyping [5683].
Other taxonomic data: Beer-spoilage ability [5683,7492]; Specific PCR primers [5959,7493]; Hop resistance [7563]; Rapid detection [7763].
Taxonomy: [12937].
  
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Publication(s) using this strain [A10149].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus paracollinoides
JCM number: 15731 <-- K. Suzuki LA8.
Source: Brewery environment [5683].
DNA-DNA relatedness: [5683].
Phylogeny: 16S rRNA gene (AB473628, LC311088).
DNA typing: Ribotyping [5683].
Other taxonomic data: Beer-spoilage ability [5683,7492]; Specific PCR primers [5959,7493]; Hop resistance [7563]; Rapid detection [7763].
Taxonomy: [12937].
  
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Publication(s) using this strain [A10149].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ligilactobacillus apodemi
JCM number: 16172 <-- CIP 108913 <-- DSM 16634 <-- R. Osawa ASB1.
Source: Wild mouse feces, Kyotanabe, Japan [7698].
Biochemistry/Physiology: [7698,8459].
Cell wall: Type A4α (L-Lys-D-Asp) [7698].
G+C (mol%): 38.5 (HPLC) [7698], 38.6 (genome sequence) [12937].
DNA-DNA relatedness: [8459].
Phylogeny: 16S rRNA gene (AJ871178, LC519852) [7698].
DNA typing: Ribotyping [7698], ARDRA [8459].
Genome sequence: AZFT00000000, BAMM00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12500.
  
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Publication(s) using this strain [B13375, A19493].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paucilactobacillus oligofermentans
JCM number: 16175 <-- DSM 15707 <-- J. Björkroth <-- H. Niinivirta AMKR18.
Source: Modified-atmosphere-packaged poultry products [6356].
Biochemistry/Physiology: [6356].
G+C (mol%): 35.3-39.9 (HPLC) [6356], 35.6 (genome sequence) [12937].
DNA-DNA relatedness: [6356].
Phylogeny: 16S rRNA gene (AY733084, LC519865) [6356].
DNA typing: Ribotyping [6356].
Genome sequence: AZFE00000000, LN898144, LN898145 (plasmid).
  
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Publication(s) using this strain [B13259].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Companilactobacillus paralimentarius
JCM number: 16180 <-- DSM 19674 <-- R. Mañes-Lázaro 203.
Source: Spanish Bobal grape must [7699].
Biochemistry/Physiology: [7699].
Cell wall: Type A4α (L-Lys-D-Asp) [7699].
G+C (mol%): 34.03 (HPLC) [7699], 35.3 (genome sequence) [12937].
DNA-DNA relatedness: [7699,9229].
Phylogeny: 16S rRNA gene (AY681134) [7699].
DNA typing: RAPD [7699], ribotyping [7699], ISR-ARDRA [7699], 16S-ARDRA [7699].
Taxonomy: [9229,12937].
Genome sequence: AZDY00000000, BJZF00000000, MYFM00000000.
More information: Type strain of Lactobacillus bobalius [7699].
Publication(s) using this strain [B12187].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactococcus fujiensis
JCM number: 16395 <-- Y. Cai NJ317.
Source: Outer leaves of Chinese cabbages (Brassica rapa L. var. glabra Regel), Fujinomiya, Shizuoka, Japan [8686].
Biochemistry/Physiology: [8686].
Fatty acid: [8686].
G+C (mol%): 42.1 (HPLC) [8686].
DNA-DNA relatedness: [8686].
Phylogeny: 16S rRNA gene (AB485959, LC519867) [8686].
DNA typing: Ribotyping [8686].
Genome sequence: BBAL00000000, JXJU00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12549.
  
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Publication(s) using this strain [B11108, A11280, A16289, A17084].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactococcus fujiensis
JCM number: 16396 <-- Y. Cai NJ414.
Source: Outer leaves of Chinese cabbages (Brassica rapa L. var. glabra Regel), Fujinomiya, Shizuoka, Japan [8686].
Biochemistry/Physiology: [8686].
Fatty acid: [8686].
G+C (mol%): 42.2 (HPLC) [8686].
DNA-DNA relatedness: [8686].
Phylogeny: [8686].
DNA typing: Ribotyping [8686].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactococcus fujiensis
JCM number: 16397 <-- Y. Cai NJ415.
Source: Outer leaves of Chinese cabbages (Brassica rapa L. var. glabra Regel), Fujinomiya, Shizuoka, Japan [8686].
Biochemistry/Physiology: [8686].
Fatty acid: [8686].
G+C (mol%): 42.5 (HPLC) [8686].
DNA-DNA relatedness: [8686].
Phylogeny: [8686].
DNA typing: Ribotyping [8686].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Liquorilactobacillus aquaticus
JCM number: 16869 <-- CECT 7355 <-- R. Máñes-Lázaro <-- J.-C. Cho and J. Song IMCC 1736.
Source: Korean freshwater pond [8002].
Biochemistry/Physiology: [8002].
Cell wall: meso-A2pm [8002].
G+C (mol%): 39.15 (HPLC) [8002], 37.4 (genome sequence) [12937].
DNA-DNA relatedness: [8002].
Phylogeny: 16S rRNA gene (DQ664203, LC519860) [8002].
DNA typing: 16S-ARDRA [8002], RAPD [8002], ISR [8002], ribotyping [8002].
Genome sequence: AYZD00000000.
  
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Publication(s) using this strain [A22029].
Patent publication(s) using this strain [2023-128589].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Liquorilactobacillus uvarum
JCM number: 16870 <-- CECT 7335 <-- R. Máñes-Lázaro 8T.
Source: Spanish bobal grape must [8003].
Biochemistry/Physiology: [8003].
G+C (mol%): 36.07 (HPLC) [8003], 36.9 (genome sequence) [12937].
DNA-DNA relatedness: [8003].
Phylogeny: 16S rRNA gene (AY681126, LC519861) [8003].
DNA typing: RAPD [8003], ribotyping [8003], ISR [8003], ISR-ARDRA [8003], 16S-ARDRA [8003].
Genome sequence: AZEG00000000.
  
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Publication(s) using this strain [A20085].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lacticaseibacillus nasuensis
JCM number: 17158 <-- Y. Cai SU18.
Source: Sudan grass [Sorghum sudanense (Piper) Stapf.] silage, Nasushiobara, Tochigi, Japan [9098].
Biochemistry/Physiology: [9098].
G+C (mol%): 59.2 [9098], 57.0 (genome sequence) [12937].
DNA-DNA relatedness: [9098].
Phylogeny: 16S rRNA gene (AB608051, LC519984) [9098].
DNA typing: Ribotyping [9098].
Genome sequence: AZDJ00000000, BBAM00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12550.
  
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Publication(s) using this strain [B12116, A19055].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leucobacter chromiiresistens
JCM number: 17813 <-- DSM 22788 <-- J. Gescher JG 31 <-- J. Jacobs.
Source: Uncontaminated soil at the University of Freiburg, Germany [8662].
Biochemistry/Physiology: [8662].
Cell wall: Ala, Gly, Thr, Glu, A2bu [8662].
Fatty acid: a-C15:0, a-C17:0, i-C16:0 [8662].
Quinone: MK-11, MK-10 [8662].
Polar lipid: PG, DPG [8662].
G+C (mol%): 64.23 (genome sequence) [9617], 70.3 (genome sequence) [12227].
DNA-DNA relatedness: [8662].
Phylogeny: 16S rRNA gene (GU390657) [8662].
DNA typing: Ribotyping [8662].
Other taxonomic data: MALDI-TOF MS [8662].
Genome sequence: AGCW00000000 [9617], FNKB00000000.
More information: Resistant to chromate [8662].
Publication(s) using this strain [B15156].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Weissella oryzae
JCM number: 18190 <-- M. Tohno SG23.
Source: Fermented rice grains, Tochigi, Japan [9468].
Cell wall: [9468].
G+C (mol%): 40.5 (HPLC) [9468].
DNA-DNA relatedness: [9468].
Phylogeny: 16S rRNA gene (AB690344) [9468].
DNA typing: Ribotyping [9468].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Weissella oryzae
JCM number: 18191 <-- M. Tohno SG25.
Source: Fermented rice grains, Tochigi, Japan [9468].
Cell wall: [9468].
G+C (mol%): 40.6 (HPLC) [9468].
DNA-DNA relatedness: [9468].
Phylogeny: 16S rRNA gene (AB690345, LC521985) [9468].
DNA typing: Ribotyping [9468].
Genome sequence: BAWR00000000.
  
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Publication(s) using this strain [B13199, A23075].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paucilactobacillus hokkaidonensis
JCM number: 18460 <-- M. Tohno LOOC253.

Source: Timothy grass (Phleum pratense L.) silage produced, Hokkaido, Japan [9551].
Biochemistry/Physiology: [9551].
Cell wall: meso-A2pm [9551].
Fatty acid: n-C19:1 cyclo 9,10, n-C18:1ω9c [9551].
G+C (mol%): 39.3±0.3 (HPLC) [9551].
DNA-DNA relatedness: [9551].
Phylogeny: 16S rRNA gene (AB721548), pheS (AB731732) [9551].
DNA typing: Ribotyping [9551].
Taxonomy: [12937].
Publication(s) using this strain [B13259, A22112].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paucilactobacillus hokkaidonensis
JCM number: 18461 <-- M. Tohno LOOC260.

Source: Timothy grass (Phleum pratense L.) silage produced, Hokkaido, Japan [9551].
Biochemistry/Physiology: [9551].
Cell wall: meso-A2pm [9551].
Fatty acid: n-C19:1 cyclo 9,10, n-C18:1ω9c [9551].
G+C (mol%): 39.4±0.4 (HPLC) [9551], 38.1 (genome sequence) [12937].
DNA-DNA relatedness: [9551].
Phylogeny: 16S rRNA gene (AB721549, LC521988), pheS (AB731733) [9551].
DNA typing: Ribotyping [9551].
Genome sequence: JQCH00000000 [12937].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12562.
  
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Publication(s) using this strain [B13259, A22112].
Patent publication(s) using this strain [WO2019/211937].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paucilactobacillus hokkaidonensis
JCM number: 18462 <-- M. Tohno LOOC273.

Source: Timothy grass (Phleum pratense L.) silage produced, Hokkaido, Japan [9551].
Biochemistry/Physiology: [9551].
Cell wall: meso-A2pm [9551].
Fatty acid: n-C19:1 cyclo 9,10, n-C18:1ω9c [9551].
G+C (mol%): 39.2±0.2 (HPLC) [9551].
DNA-DNA relatedness: [9551].
Phylogeny: 16S rRNA gene (AB721550), pheS (AB731734) [9551].
DNA typing: Ribotyping [9551].
Taxonomy: [12937].
Publication(s) using this strain [B13259, A22112].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paucilactobacillus hokkaidonensis
JCM number: 18463 <-- M. Tohno LOOC279.

Source: Timothy grass (Phleum pratense L.) silage produced, Hokkaido, Japan [9551].
Biochemistry/Physiology: [9551].
Cell wall: meso-A2pm [9551].
Fatty acid: n-C19:1 cyclo 9,10, n-C18:1ω9c [9551].
G+C (mol%): 3.93±0.3 (HPLC) [9551].
DNA-DNA relatedness: [9551].
Phylogeny: 16S rRNA gene (AB721551), pheS (AB731735) [9551].
DNA typing: Ribotyping [9551].
Taxonomy: [12937].
Publication(s) using this strain [B13259].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Loigolactobacillus backii
JCM number: 18665 <-- LMG 23555 <-- I. Bohak L1062.
Source: Lagar beer, south Bavaria, Germany [9242].
Biochemistry/Physiology: [9778].
Cell wall: [9778].
Fatty acid: [9778].
G+C (mol%): 37 (HPLC) [9242], 40.9 (HPLC) [9778].
DNA-DNA relatedness: [9778].
Phylogeny: 16S rRNA gene (AB779648, LC521991), pheS (AB769496), rpoA (AB819391) [9778].
DNA typing: Ribotyping [9778].
Taxonomy: [9778].
Genome sequence: RHNQ00000000.
More information: Beer-spoiling bacterium [9242].
  
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Publication(s) using this strain [B13332, A19266].
Patent publication(s) using this strain [2017-189135].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus oryzae
JCM number: 18671 <-- M. Tohno SG293.

Source: Fermented rice grain (Oryza sativa L. subsp. japonica), Ohtawara, Tochigi, Japan [9570].
Biochemistry/Physiology: [9570].
Cell wall: [9570].
Fatty acid: [9570].
G+C (mol%): 43.4 (HPLC) [9570], 42.8 (genome sequence) [12937].
DNA-DNA relatedness: [9570].
Phylogeny: 16S rRNA gene (AB731660, LC521992), pheS (AB748613), rpoA (AB748616) [9570].
DNA typing: Ribotyping [9570].
Genome sequence: BBJM00000000 [12937], AP043859, AP043860, AP043861, AP043862.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12563.
  
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Publication(s) using this strain [B13281].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus oryzae
JCM number: 18672 <-- M. Tohno SG296.

Source: Fermented rice grain (Oryza sativa L. subsp. japonica), Ohtawara, Tochigi, Japan [9570].
Biochemistry/Physiology: [9570].
Cell wall: [9570].
Fatty acid: [9570].
G+C (mol%): 43.3 (HPLC) [9570].
DNA-DNA relatedness: [9570].
Phylogeny: 16S rRNA gene (AB731661), pheS (AB748614), rpoA (AB748617) [9570].
DNA typing: Ribotyping [9570].
Taxonomy: [12937].
Publication(s) using this strain [B13281].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus oryzae
JCM number: 18673 <-- M. Tohno SG310.

Source: Fermented rice grain (Oryza sativa L. subsp. japonica), Ohtawara, Tochigi, Japan [9570].
Biochemistry/Physiology: [9570].
Cell wall: [9570].
Fatty acid: [9570].
G+C (mol%): 43.6 (HPLC) [9570].
DNA-DNA relatedness: [9570].
Phylogeny: 16S rRNA gene (AB731662), pheS (AB748615), rpoA (AB748618) [9570].
DNA typing: Ribotyping [9570].
Taxonomy: [12937].
Publication(s) using this strain [B13281].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Loigolactobacillus iwatensis
JCM number: 18838 <-- M. Tohno IWT246.

Source: Orchardgrass (Dactylis glomerata L.) silage, Iwate, Japan [9778].
Biochemistry/Physiology: [9778].
Cell wall: [9778].
Fatty acid: C18:1ω9c, C19 cyclo 9,10/:1 [9778].
G+C (mol%): 41.3 (HPLC) [9778], 40.6 (genome sequence) [12937].
DNA-DNA relatedness: [9778].
Phylogeny: 16S rRNA gene (AB773428, LC589207), pheS (AB769497), rpoA (AB819388) [9778].
DNA typing: Ribotyping [9778].
Genome sequence: RHNP00000000 [12937].
  
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Publication(s) using this strain [B13332, A19266].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Loigolactobacillus iwatensis
JCM number: 18839 <-- M. Tohno IWT248.

Source: Orchardgrass (Dactylis glomerata L.) silage, Iwate, Japan [9778].
Biochemistry/Physiology: [9778].
Cell wall: [9778].
Fatty acid: C18:1ω9c, C19 cyclo 9,10/:1 [9778].
G+C (mol%): 41.2 (HPLC) [9778].
DNA-DNA relatedness: [9778].
Phylogeny: 16S rRNA gene (AB773429), pheS (AB769498), rpoA (AB819389) [9778].
DNA typing: Ribotyping [9778].
Taxonomy: [12937].
Publication(s) using this strain [B13332].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus silagei
JCM number: 19001 <-- M. Tohno IWT126.

Source: Orchardgrass silage, Hachimantai, Iwate, Japan [9781].
Cell wall: [9781].
Fatty acid: C16:0, C19:1 cyclo 9,10 [9781].
G+C (mol%): 45.6 (HPLC) [9781], 44.9 [12937].
DNA-DNA relatedness: [9781].
Phylogeny: 16S rRNA gene (AB786910, LC589213), pheS (AB794992) [9781], rpoA (AB894872) [10601].
DNA typing: Ribotyping [9781].
Genome sequence: BCMG00000000 [12937], PUFJ00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12666.
  
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Publication(s) using this strain [B13387, B15270, B17320, B21313].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium aquatimens
JCM number: 19112 <-- CCUG 61574 <-- A. F. Yassin IMMIB L-2475 <-- M. Aravena-Román.
Source: Blood cultures (30-year-old man with septicemia), Perth, Western Australia, Australia [9411].
Biochemistry/Physiology: [9411].
Fatty acid: n-C16:1ω7c, n-C18:1ω9c [9411].
G+C (mol%): 60.8 (HPLC) [9411].
DNA-DNA relatedness: [9411].
Phylogeny: 16S rRNA gene (HE575405), rpoB (partial) (HE817755) [9411].
DNA typing: RAPD-PCR [9411], ribotyping [9411].
Other taxonomic data: Mycolic acid [9411]; MALDI-TOF MS [9411].
Genome sequence: JADOUE00000000, BAAGSW010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides hungaricus
JCM number: 19558 <-- DSM 21673 <-- E. M. Tóth RaM5-12 (=1RaM5-12).
Source: Drinking water supply system of Budapest, Hungary [9646].
Biochemistry/Physiology: [9646].
Cell wall: LL-A2pm [9646].
Fatty acid: i-C16:0, a-C17:0 [9646].
Quinone: MK-8(H4) [9646].
Polar lipid: DPG [9646].
G+C (mol%): 71.4 (HPLC) [9646].
Phylogeny: 16S rRNA gene (AM981198) [9646].
DNA typing: Ribotyping [9646].
Other taxonomic data: MALDI-TOF MS [9646].
Genome sequence: BAAGRO010000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus mixtipabuli
JCM number: 19804 <-- M. Tohno IWT8.
Source: Total mixed ration silage [10601].
Biochemistry/Physiology: [10601].
Cell wall: Type A4α (Lys-Asp) [10601].
Fatty acid: [10601].
G+C (mol%): 44.7 (HPLC) [10601].
DNA-DNA relatedness: [10601].
Phylogeny: 16S rRNA gene (AB894863), pheS (AB894866), rpoA (AB894869) [10601].
DNA typing: Ribotyping [10601].
Taxonomy: [12937].
Publication(s) using this strain [B15270].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus mixtipabuli
JCM number: 19805 <-- M. Tohno IWT30.
Source: Total mixed ration silage [10601].
Biochemistry/Physiology: [10601].
Cell wall: Type A4α (Lys-Asp) [10601].
Fatty acid: [10601].
G+C (mol%): 44.6 (HPLC) [10601], 43.7 (genome sequence) [12937].
DNA-DNA relatedness: [10601].
Phylogeny: 16S rRNA gene (AB894864, LC638725), pheS (AB894867), rpoA (AB894870) [10601].
DNA typing: Ribotyping [10601].
Genome sequence: BCMF00000000 [12937].
  
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Publication(s) using this strain [B15270, B17320, B21313].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Secundilactobacillus mixtipabuli
JCM number: 19806 <-- M. Tohno IWT75.
Source: Total mixed ration silage [10601].
Biochemistry/Physiology: [10601].
Cell wall: Type A4α (Lys-Asp) [10601].
Fatty acid: [10601].
G+C (mol%): 44.0 (HPLC) [10601].
DNA-DNA relatedness: [10601].
Phylogeny: 16S rRNA gene (AB894865), pheS (AB894868), rpoA (AB894871) [10601].
DNA typing: Ribotyping [10601].
Taxonomy: [12937].
Publication(s) using this strain [B15270].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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