JCM Catalogue

Amycolatopsis japonica Goodfellow et al. 1997

Taxonomy in NCBI database: Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales; Pseudonocardiaceae.

10140T <-- M. Hamada MG417-CF17 (IMC A-0199).
Accessioned in 1997.
=CIP 106801 =DSM 44213 =KCTC 9817 =NRRL B-24138.
"Amycolatopsis japonicum".
Type strain [4268,5387].
Medium: 45;  Temperature: 28°C; Rehydration fluid: 656.

Biochemistry/Physiology: [4268].
Cell wall: meso-A2pm; Ara, Gal (chemotype IV) [4268].
Fatty acid: [4268].
Quinone: MK-9(H4) [4268].
Polar lipid: Type PII (DPG, PE, PG, PI, PIM) [4268].
G+C (mol%): 68.89 (genome sequence) [10506].
Phylogeny: 16S rRNA gene (AJ508236, X77959) [4268,5620], gyrB (EU822896) [7869]; Concatenated 163 conserved core genes [13513].
DNA typing: Ribotyping [5620].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances [13513].
Genome sequence: CP008953, CP008954 (plasmid pAmyja1) [10506].
Production: (S,S)-N,N'-Ethylenediaminedisuccinic acid (an inhibitor of phospholipase C) [4268,4269].
NCBI Assembly ID: GCA_000732925 (GenBank), GCF_000732925 (RefSeq).
BacDive ID: 13231.
NCBI Taxonomy ID: 208439.

 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
- Instructions for an order
- Go to JCM Top Page
- Go to List of JCM strains

Copyright © 2024 Microbe Division (JCM) - All Rights Reserved