JCM Catalogue

Flavobacterium johnsoniae (Stanier 1947) Bernardet et al. 1996
Taxonomy in NCBI database: Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.
8514 <-- NCIMB 11054 <-- ATCC 17061 <-- C. B. van Niel MYX.1.1.1.
Accessioned in 1992.
=ATCC 17061 =BCRC 14874 =CCUG 35202 =CIP 100931 =DSM 2064 =GIFU 2500 =IAM 14304 =IFO 14942 =LMG 1340 =LMG 1341 =NBRC 14942 =NCCB 96103 =NCIMB 11054.
Flavobacterium johnsoniae.
Cytophaga johnsonae.
Type strain [596,3183,12724,12970].
Medium: 22;  Temperature: 25°C; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top

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Source: Soil or mud, Rothamsted or Cambridge, UK.
Biochemistry/Physiology: [3060].
Quinone: MK-6 [3903].
Polar lipid: PE [9152].
G+C (mol%): 33 (Bd) [2911].
Phylogeny: 16S rRNA (D12664) [3903], 16S rRNA gene (AM230489), genome BLAST distance phylogeny [12724].
Other taxonomic data: API ZYM [3060]; Polyamine [5054].
Taxonomy: [4343,12724].
Genome sequence: CP000685, FRAO00000000, MUGZ00000000.
More information: Pectinolytic; Degrades reprecipitated chitin.
NCBI Assembly ID: GCA_000016645 (GenBank), GCF_000016645 (RefSeq).
BacDive ID: 5515.
NCBI Taxonomy ID: 986.
Publication(s) using this strain [A04168, A04172, A11165, A15068, A15537, A17131].
Patent publication(s) using this strain [JP2013-169190A].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Not applicable -
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
7449 <-- H. Oyaizu KS 0403 <-- NCIB 9337 <-- T. Gibson.
Accessioned in 1989.
=NCIMB 9337.
Flavobacterium johnsoniae.
Cytophaga johnsonae.
Medium: 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Biochemistry/Physiology: [2419].
Fatty acid: i-C15:0, n-C16:1, 3OH-i-C17:0, 3OH-i-C15:0 [2419].
Quinone: MK-6 [2419].
G+C (mol%): 33.6 (Tm) [2419].
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 5 [2419].
More information: The 16S rRNA gene sequence of this strain has 95.9 % similarity to that of the type strain of Flavobacterium johnsoniae (AM230489).
BacDive ID: 165530.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
7450 <-- H. Oyaizu KS 0404 <-- NCIB 10150 <-- D. M. Webley C4.
Accessioned in 1989.
=CCUG 17935 =CIP 101265 =DSM 425 =NCIMB 10150.
Flavobacterium johnsoniae.
Cytophaga johnsonae.
Medium: 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +
open link in new window
Biochemistry/Physiology: [2419].
Fatty acid: i-C15:0, n-C16:1, 3OH-i-C17:0, 3OH-i-C15:0 [2419].
Quinone: MK-6 [2419].
G+C (mol%): 32.6 (Tm) [2419].
Phylogeny: 5S rRNA [3169], 16S rRNA gene (AM230488).
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 5 [2419].
More information: The 16S rRNA gene sequence of this strain has 96.0 % similarity to that of the type strain of Flavobacterium johnsoniae (AM230489).
BacDive ID: 5514.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
7451 <-- H. Oyaizu KS 0405 <-- NCIB 11035 <-- W. M. Fogarty.
Accessioned in 1989.
=NCIMB 11035.
Flavobacterium johnsoniae.
Cytophaga johnsonae.
Medium: 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +
open link in new window
Biochemistry/Physiology: [2419].
Fatty acid: i-C15:0, 3OH-i-C15:0, n-C16:0 [2419].
Quinone: MK-6 [2419].
G+C (mol%): 32.4 (Tm) [2419].
Other taxonomic data: Polyamine [5054].
Taxonomy: Cluster 5 [2419].
More information: The 16S rRNA gene sequence of this strain has 96.7 % similarity to that of the type strain of Flavobacterium johnsoniae (AM230489).
BacDive ID: 165531.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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