JCM Catalogue

Eubacterium limosum (Eggerth 1935) Prévot 1938
Taxonomy in NCBI database: Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae.
6421T <-- T. Mitsuoka <-- ATCC 8486 <-- A. H. Eggerth ("Bacteroides limosum").
Accessioned in 1987.
=ATCC 8486 =BCRC 14401 =CCUG 16793 =CIP 104169 =DSM 20543 =JCM 9978 =KCTC 3266 =NCIMB 9763.
Type strain [596].
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top

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Biochemistry/Physiology: [4495].
Cell wall: Murein type B4 [1376].
G+C (mol%): 47.8 (Tm) [1376].
DNA-DNA relatedness: [1376].
Phylogeny: 16S rRNA (M59120) [1376], 16S rRNA gene (AB595134, LC019782).
Other taxonomic data: Polyamine [4622].
Genome sequence: CP019962.
More information: Betaine fermentation [4495]; Isoflavonoides biochanin A [4817].
NCBI Assembly ID: GCA_000807675 (GenBank), GCF_000807675 (RefSeq).
BacDive ID: 5432.
NCBI Taxonomy ID: 1736.
Publication(s) using this strain [A04184, A06251, A09198, A10101, A10249, A18166, A20446, A20487, A23132, A24048].
Patent publication(s) using this strain [JP2007-112805A, 2022-148943, WO2022-202961, 2023-150100, 2023-152713].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Not applicable -
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
9978T <-- STAFF 1027 <-- ATCC 8486 <-- A. H. Eggerth ("Bacteroides limosum").
Accessioned in 1996.
=ATCC 8486 =BCRC 14401 =CCUG 16793 =CIP 104169 =DSM 20543 =JCM 6421 =KCTC 3266 =NCIMB 9763.
Type strain [596].
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
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Biochemistry/Physiology: [4495].
Cell wall: Murein type B4 [1376].
G+C (mol%): 47.8 (Tm) [1376].
DNA-DNA relatedness: [1376].
Phylogeny: 16S rRNA (M59120) [1376], 16S rRNA gene (AB595134, LC019782).
Other taxonomic data: Polyamine [4622].
Genome sequence: CP019962.
More information: Betaine fermentation [4495]; Isoflavonoides biochanin A [4817].
NCBI Assembly ID: GCA_000807675 (GenBank), GCF_000807675 (RefSeq).
BacDive ID: 5432.
NCBI Taxonomy ID: 1736.
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Not applicable -
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
6501 <-- T. Mitsuoka <-- VPI 1939.
Accessioned in 1987.
=VPI 1939.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
Phylogeny: 16S rRNA gene (AB638446).
BacDive ID: 165411.
Publication(s) using this strain [A22485].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Not applicable -
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
9976 <-- STAFF 1028 <-- ATCC 10825 <-- H. A. Barker 32 of group A2.
Accessioned in 1996.
=ATCC 10825 =DSM 20517 =KCTC 2487 =KCTC 5004 =NCIMB 9554 =NCTC 10469.
Eubacterium limosum.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
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Source: Intestinal contents of white rats [10811].
Biochemistry/Physiology: [10811].
DNA-DNA relatedness: [14706].
Phylogeny: 16S rRNA gene (LC145549), phylogenomic analysis [14706].
Genome sequence: CP132138 [14706].
More information: Cataloged as Eubacterium limosum until Nov. 2015.
BacDive ID: 5433.
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Not applicable -
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
10283 <-- DSM 2593 <-- E. Naumann <-- R. Walther 2A.
Accessioned in 1998.
=DSM 2593.
Eubacterium limosum.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
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Source: River mud.
G+C (mol%): 46.9 (genome sequence) [14706].
DNA-DNA relatedness: [14706].
Phylogeny: 16S rRNA gene (LC480790), phylogenomic analysis [14706].
Genome sequence: CP132135 [14706].
More information: Cataloged as Eubacterium limosum until Feb. 2025.
BacDive ID: 5430.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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