Summary of assembly and annotation
 
 Scientific name   JCM no.
 Wickerhamiella versatilis   5958
Genome assembly:
ALLPATHS-LG (ver. 52488)
Genome assembly ver. 001
Estimated genome size   10,639,575
Sequence coverage   281
# of contigs   52
Total length (contigs)   9,273,528
N50 (contigs)   847,044
# of scaffolds   19
Total scaffold length (with gaps)   9,313,034
% gaps   0.4
N50 (scaffold)   2,231,275
GC%   44.9
Gene prediction:
  MAKER annotation pipeline (release 2.31.8)
    Gene predictors used: Augustus (3.0.3), SNAP (2013-02-16), GeneMark-ES (Suite 4.21)
    Reference used: Candida caseinolytica
    tRNAscan-SE (version 1.23)
  Infernal cmscan (version 1.1.1)
    Database used: Rfam (Release 12.0)
Functional annotaion:
  Sma3S: 2013-09-01
    Database used: Uniprot-TrEMBL (release 2015_11), Uniprot-sprot (release 2015_11)
Gene prediction & funcational annotation ver. 001
# of predicted gene models   5,535
# of predicted transcript models   5,535
Average transcript length (bp)   1,384
Average coding length (bp)   1,298
Average protein length (aa)   432
Average number of exons per gene model   1.1
Average exon size (bp)   1,169
Average intron size (bp)   746
# of non-coding RNA   217
# of functionally annotated genes trembl   3,274
# of functionally annotated genes sprot   2,135
CEGMA complete (%)   91.13
CEGMA partial (%)   92.74