JCM Catalogue

Mycobacterium shigaense Fukano et al. 2018

Taxonomy in NCBI database: Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae.

32072T <-- Y. Hoshino; Natl. Inst. of Infect. Dis., Japan; UN-152.
Accessioned in 2017.
=DSM 46748.
Type strain [12206].
Biosafety level 2 (provisional).
Medium: 386;  Temperature: 37°C; Rehydration fluid: 656.

Source: Skin biopsies from a Japanese male patient with a history of Hodgkin's disease and severe cellular immunodeficiency, Shiga Pref., Japan [11968,12206].
Biochemistry/Physiology: [11968,12206].
Fatty acid: n-C16:0, n-C18:1ω9c, 10Me-C18:0, n-C16:1ω6c [12206].
Polar lipid: DPG, PE, PIMs [12206].
G+C (mol%): 67.3 (genome sequence) [12209].
DNA-DNA relatedness: [11968].
Phylogeny: 16S rRNA gene (AB547401), rpoB1 (AB547403), rpoB2 (LC272088), 16S-23S rRNA ITS & 23S rRNA gene (AB547404), hsp65 (AB547402) [11968,12206].
Other taxonomic data: Mycolic acid [11968,12206]; Average nucleotide identity [12206].
Genome sequence: AP018164 [12209], MWON00000000 [12206].
NCBI Taxonomy ID: 722731.

Publication(s) using this strain [C18160, C18268].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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