JCM Catalogue


Rhodococcus hoagii (Morse 1912) Kämpfer et al. 2014

Taxonomy in NCBI database: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae.

1311 <-- K. Suzuki CNF 002 <-- AJ 1402 <-- ATCC 6939 <-- NCTC 1621 <-- H. Magnusson.
Accessioned in 1982.
=ACM 4987 =ATCC 6939 =ATCC 25729 =BCRC 12859 =CCM 3429 =CCUG 892 =CCUG 20987 =CCUG 23606 =CECT 555 =CGMCC 4.1824 =CIP 54.72 =DSM 20307 =DSM 43349 =HAMBI 2061 =IAM 12426 =IFM 0162 =IFO 14956 =IMET 7467 =IMSNU 22213 =JCM 3209 =KACC 20051 =KCTC 9082 =LMG 5358 =LMG 18452 =NBIMCC 1230 =NBRC 14956 =NBRC 101255 =NCAIM B.02034 =NCIMB 12828 =NCTC 1621 =NRRL B-16538 =PCM 559 =VKM Ac-953.
Rhodococcus equi.
Corynebacterium equi.
Medium: 26, 43;  Temperature: 28°C; Rehydration fluid: 656.

Source: Lung abscess of foal.
Biochemistry/Physiology: [255,486,2843].
Numerical taxonomy: [2964,5342].
Cell wall: meso-A2pm direct [251]; N-glycolyl Mur [276]; sugars [3312].
Fatty acid: [261,426,643,3821,3925].
Quinone: MK-8(H2) [263,391,3821].
Polar lipid: [264].
G+C (mol%): 67.8 (Tm) [125], 67.2 (Tm) [5453], 69.7 (HPLC) [2843], 70.4 [490], 68.8 (genome sequence) [12227].
DNA-DNA relatedness: [259,490,2843,3821].
Phylogeny: 16S rRNA (M29574), 16S rRNA gene (AF490539, FJ468344, X80603, X80614) [3943,3951,5533]; Concatenated sequences of 400 conserved proteins [13831].
Other taxonomic data: Mycolic acid [250,392,425,3821,4768]; Ribosomal protein [3947]; Genome-to-genome distances [12227]; Average amino acid identity, percentage of conserved proteins [13831].
Taxonomy: [256,486,9761,12227]; Nomenclature [9929,9930,9932].
Genome sequence: APJC00000000, BCRL00000000, LWTX00000000, UGVJ00000000.
More information: Type strain of Rhodococcus equi [486,596]; Pili [2247].
NCBI Assembly ID: GCA_002094305 (GenBank), GCF_002094305 (RefSeq).
BacDive ID: 10843.
NCBI Taxonomy ID: 43767.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08038.

Publication(s) using this strain [A16082].
Patent publication(s) using this strain [JP2007-124985A, 2019-150002, 2022-140097].
 Related information on delivery / use of the strain
Biosafety level 2
Terms and conditions Not applicable -
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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