JCM Catalogue


Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016

Taxonomy in NCBI database: Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.

1296T <-- ATCC 9689 <-- F. E. Clark 90556-M6S (L. S. McClung 1780).
Accessioned in 1982.
=ATCC 9689 =BCRC 10642 =CCUG 4938 =CECT 531 =CGMCC 1.2184 =CIP 104282 =DSM 1296 =LMG 15861 =LMG 21717 =NCIMB 10666 =NCTC 11209.
Clostridium difficile.
Type strain [596,11120,11273].
Biosafety level 2.
Medium: 13, 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.
 
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Source: Human feces [11120].
Biochemistry/Physiology: [11120].
Cell wall: meso-A2pm [11120].
Fatty acid: [1386,11120].
Phylogeny: 16S rRNA gene (AB075770, AB548672, X73450) [3374,11120].
Other taxonomic data: Protein profile [2652]; Antimicrobial susceptibility [1378].
Taxonomy: [11120].
Genome sequence: CP011968 (chromosome), CP011969 (plasmid) [10742].
More information: Metabolism of amino acids [1423].
NCBI Taxonomy ID: 1496.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12760.

Publication(s) using this strain [A04184, A06033, A06045, A09019, A09238, A10249, A11028, A11076, A11280, A12071, A13500, A15197, A15555, A17481, A18129, A18166].
Patent publication(s) using this strain [JP2008-143793A, JP2008-199929A, JP2008-271931A, WO2012/132913, WO2014/061752, 2015-164416, 2016-169378, AU2015215750, 2017-019833].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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