JCM Catalogue

Halobacterium trapanicum (Petter 1931) Elazari-Volcani 1957
Taxonomy in NCBI database: Archaea; Methanobacteriota; Halobacteria; Halobacteriales; Halobacteriaceae.
10477 <-- NCIMB 13488 <-- W. D. Grant <-- NRC 34021.
Accessioned in 1999.
=CGMCC 1.4297 =DSM 12287 =NCIMB 13488 =NRC 34021.
Halobacterium trapanicum.
Type strain [4058,5458,10698].
Medium: 168;  Temperature: 37°C; Rehydration fluid: 307.   more information +  Full / Short version of the cataloguepage top
Phylogeny: 16S rRNA gene (X82168) [4058].
Other taxonomic data: Polyamine [5431].
Taxonomy: An equivalent strain, NCIMB 13488, is proposed as the neotype strain of Halorubrum trapanicum; however, the Judicial Commission of ICSP decided that it may be the type strain of the species [4544,5458].
Genome sequence: BAAADX010000000, JAGGKE010000000.
NCBI Assembly ID: GCA_017873555 (GenBank), GCF_017873555 (RefSeq).
BacDive ID: 5942.
NCBI Taxonomy ID: 29284.
Publication(s) using this strain [B07029, B07094, B08111, B09080, A10175].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
8979 <-- NCIMB 767 <-- N. E. Gibbons <-- LMD 33.42.
Accessioned in 1993.
=ATCC 43102 =IAM 13173 =JCM 9742 =NCIMB 767 =VKM B-2026.
Halobacterium trapanicum.
Medium: 168, 169;  Temperature: 37°C; Rehydration fluid: 307.   more information +
Polar lipid: [4556].
Phylogeny: 16S rRNA gene (D63786) [4247].
Other taxonomic data: Polyamine [3796].
More information: Identity of the strain [3858].
BacDive ID: 165985.
NCBI Taxonomy ID: 228414.
Publication(s) using this strain [A04036].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
9742 <-- ATCC 43102 <-- NCIMB 767 <-- N. E. Gibbons <-- LMD 33.42.
Accessioned in 1995.
=ATCC 43102 =IAM 13173 =JCM 8979 =NCIMB 767 =VKM B-2026.
Halobacterium trapanicum.
Medium: 168;  Temperature: 37°C; Rehydration fluid: 307.   more information +
Polar lipid: [4556].
Phylogeny: 16S rRNA gene (D63786) [4247].
Other taxonomic data: Polyamine [3796,4558].
More information: Identity of the strain [3858].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
9743 <-- M. Kamekura <-- M. Kates <-- R. Latta.
Accessioned in 1995.
=NRC 2856.
Haloterrigena turkmenica.
Halobacterium trapanicum.
Medium: 168;  Temperature: 37°C; Rehydration fluid: 307.   more information +
Polar lipid: [4057].
G+C (mol%): 59.2 (Tm) [4556].
Phylogeny: 16S rRNA gene (D14125) [4057].
Other taxonomic data: Polyamine [4558].
Taxonomy: [5541].
More information: Bacteriorhodopsin gene [4307]; Deltarhodopsin [6353]; History of the strain [4307]; Shows low DNA-DNA relatedness with the type strain of Haloterrigena turkmenica [4742].
BacDive ID: 166056.
NCBI Taxonomy ID: 62320.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07558.
Publication(s) using this strain [A04036, B04134, A06020, A11336].
Patent publication(s) using this strain [WO/2015/170609].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Not applicable -
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
- Instructions for an order
- Go to JCM Top Page
- Go to List of JCM strains

Copyright © 2024 Microbe Division (JCM) - All Rights Reserved