JCM Catalogue

Gordona sputi (Tsukamura 1978) Stackebrandt et al. 1989
3228 <-- KCC A-0228 <-- M. Tsukamura 3884 (strain Nagura 8539).
Accessioned in 1983.
=ATCC 29627 =BCRC 13698 =CCM 3354 =CCUG 47138 =CIP 100849 =DSM 43896 =IFO 16049 =IMET 7569 =KCTC 3436 =NBRC 16049 =NBRC 100414 =PCM 2576.
Gordona sputi.
Rhodococcus sputi.
Category: Bacteria.
Type strain [595,736,2317,2434].
Medium: 43;  Temperature: 28°C; Rehydration fluid: 656.   more information +  Full / Short version of the cataloguepage top

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Source: Sputa of patients with pulmonary disease [736,2317].
Biochemistry/Physiology: [736,2317,4234].
Numerical taxonomy: [736,2073].
Cell wall: Chemotype IV A [2957]; N-glycolyl Mur [4176].
Fatty acid: [4234].
Quinone: MK-9(H2) [2957].
G+C (mol%): 66.7 (Tm) [2480].
DNA-DNA relatedness: [2480,3590].
Phylogeny: 16S rRNA gene (X80634, X81923) [3591,3951,3956], gyrB (AB438197), secA1 (AB437925) [8445].
DNA typing: Ribotyping [3590].
Other taxonomic data: Mycolic acid [2957,3590,4234,4768]; Ribosomal protein [3947].
Taxonomy: [2434,2957,3590].
Genome sequence: BAFC00000000, JAAXPD000000000.
NCBI Assembly ID: GCA_000248055 (GenBank), GCF_000248055 (RefSeq).
BacDive ID: 10570.
NCBI Taxonomy ID: 36823.
Patent publication(s) using this strain [WO2007/026860].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
6047 <-- M. Tsukamura E6324 (=61001).
Accessioned in 1986.
=ATCC 33609 =CIP 104183 =DSM 44019 =NCIMB 13125 =NRRL B-16936.
Gordona sputi.
Rhodococcus chubuensis.
Category: Bacteria.
Medium: 43;  Temperature: 28°C; Rehydration fluid: 656.   more information +
Source: Human sputa [2073].
Biochemistry/Physiology: [2073,3590].
Numerical taxonomy: [2073].
DNA-DNA relatedness: [3590].
Phylogeny: 16S rRNA gene (X80627, X81927) [3951,3956].
DNA typing: Ribotyping [3590].
Other taxonomic data: Mycolic acid [3590,4768].
Taxonomy: [3590].
More information: Type strain of Rhodococcus chubuensis [133,2073].
BacDive ID: 10572.
Patent publication(s) using this strain [WO2007/026860].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
6048 <-- M. Tsukamura E8179 (=61501).
Accessioned in 1986.
=ATCC 33610 =CIP 104182 =DSM 43979.
Gordona sputi.
Rhodococcus obuensis.
Category: Bacteria.
Medium: 43;  Temperature: 28°C; Rehydration fluid: 656.   more information +
Source: Human sputa [2073].
Biochemistry/Physiology: [2073].
Numerical taxonomy: [2073].
G+C (mol%): 65.8 (Tm) [2480].
DNA-DNA relatedness: [2480].
Phylogeny: 16S rRNA gene (partial) (AY262329).
Taxonomy: [2480].
More information: Type strain of Rhodococcus obuensis [133,2073].
BacDive ID: 10571.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
6411 <-- M. Tsukamura E12652.
Accessioned in 1987.
Gordona sputi.
Rhodococcus sputi.
Category: Bacteria.
Medium: 26, 43;  Temperature: 28°C; Rehydration fluid: 656.   more information +
Source: Swine [2374].
Biochemistry/Physiology: [2374].
Numerical taxonomy: [2374].
Cell wall: Chemotype IV A; N-glycolyl Mur [2374].
Quinone: MK-9(H2), MK-8(H2) [2374].
G+C (mol%): 65.2 (HPLC) [2374].
Other taxonomic data: Mycolic acid [2374].
BacDive ID: 165399.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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