JCM Catalogue

Clostridium scindens Morris et al. 1985
Taxonomy in NCBI database: Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae.
6567T <-- G. N. Morris.
Accessioned in 1987.
=ATCC 35704 =BCRC 14551 =CIP 106687 =DSM 5676.
Type strain [2643].
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top

open link in new window
open link in new window
Source: Human feces.
G+C (mol%): 45.0 (Tm) [2643].
Phylogeny: 16S rRNA gene (AB910747, AB020883).
Other taxonomic data: C17 - C20 steroid desmolase [2644].
Genome sequence: ABFY00000000, CP036170.
NCBI Assembly ID: GCA_004295125 (GenBank), GCF_004295125 (RefSeq).
BacDive ID: 2748.
NCBI Taxonomy ID: 29347.
Publication(s) using this strain [A09198, A10101, A15128, A15541, A15589, A17070, A17155, A17481, A18129, A20079, A21492, A23041, A23150].
Patent publication(s) using this strain [2023-161983, 7279983].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
10418 <-- F. Takamine <-- P. B. Hylemon <-- VPI 12708.
Accessioned in 1998.
=VPI 12708.
Eubacterium sp.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
open link in new window
open link in new window
Source: Feces of colon-cancer patient [4727].
Biochemistry/Physiology: [4727].
G+C (mol%): 47.1 (HPLC) [4727].
DNA-DNA relatedness: [4727].
Phylogeny: 16S rRNA gene (AB020727, AB971816) [4727].
Genome sequence: CP113781 [14203].
More information: Bile acid 7α-dehydroxylating activity [4727].
NCBI Assembly ID: GCA_027941655 (GenBank), GCF_027941655 (RefSeq).
BacDive ID: 160948.
Publication(s) using this strain [A06202, A15560, A20545].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
10419 <-- F. Takamine Y-1113.
Accessioned in 1998.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
open link in new window
open link in new window
Phylogeny: 16S rRNA gene (AB020728, LC480792) [4727].
BacDive ID: 160949.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
10420 <-- F. Takamine M-18.
Accessioned in 1998.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
open link in new window
open link in new window
Phylogeny: 16S rRNA gene (AB020729, LC480793) [4727].
BacDive ID: 160951.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
10421 <-- F. Takamine I-10.
Accessioned in 1998.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
open link in new window
open link in new window
Phylogeny: 16S rRNA gene (AB020730, LC145582) [4727].
BacDive ID: 160952.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
10422 <-- F. Takamine TH-82.
Accessioned in 1998.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
open link in new window
open link in new window
Phylogeny: 16S rRNA gene (AB020731, LC153548) [4727].
BacDive ID: 160953.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
10423 <-- F. Takamine 36S.
Accessioned in 1998.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
open link in new window
open link in new window
Phylogeny: 16S rRNA gene (AB020806, LC480794) [4727].
BacDive ID: 160954.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
35483 <-- M. Sakamoto; RIKEN BRC-JCM, Japan; 1BBH12.
Accessioned in 2022.
Medium: 14;  Temperature: 37°C; Anaerobic; Rehydration fluid: 663.   more information +
open link in new window
open link in new window
Source: Feces of a man in the forties, Japan.
Phylogeny: 16S rRNA gene (LC717919).
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
- Instructions for an order
- Go to JCM Top Page
- Go to List of JCM strains

Copyright © 2025 Microbe Division (JCM) - All Rights Reserved