Summary of assembly and annotation
 
 Scientific name   JCM no.
 Bulleromyces albus   2954
Genome assembly:
ALLPATHS-LG (ver. 52155)
Genome assembly ver. 001
Estimated genome size   21,690,777
Sequence coverage   198
# of contigs   20
Total length (contigs)   19,407,385
N50 (contigs)   1,486,889
# of scaffolds   8
Total scaffold length (with gaps)   19,417,308
% gaps   0.1
N50 (scaffold)   2,864,929
GC%   54.3
Gene prediction:
  MAKER annotation pipeline (release 2.31.8)
    Gene predictors used: Augustus (3.0.3), SNAP (2013-02-16), GeneMark-ES (Suite 4.21)
    Reference used: Cryptococcus neoformans
    tRNAscan-SE (version 1.23)
  Infernal cmscan (version 1.1.1)
    Database used: Rfam (Release 12.0)
Functional annotaion:
  Sma3S: 2013-09-01
    Database used: Uniprot-TrEMBL (release 2015_11), Uniprot-sprot (release 2015_11)
Gene prediction & funcational annotation ver. 001
# of predicted gene models   7,954
# of predicted transcript models   7,954
Average transcript length (bp)   1,824
Average coding length (bp)   1,518
Average protein length (aa)   506
Average number of exons per gene model   6.1
Average exon size (bp)   249
Average intron size (bp)   59
# of non-coding RNA   97
# of functionally annotated genes trembl   5,629
# of functionally annotated genes sprot   1,844
CEGMA complete (%)   93.95
CEGMA partial (%)   94.76

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