JCM Catalogue

Bacteroides caccae Johnson et al. 1986

Taxonomy in NCBI database: Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae.

9498^T <-- ATCC 43185 <-- L. V. Holdeman VPI 3452A.
Accessioned in 1994.
=ATCC 43185 =CCUG 38735 =CIP 104201 =DSM 19024 =NCTC 13051.
Type strain [3605].
Medium: 14; Temperature: 37°C; Anaerobic; Rehydration fluid: 663.

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Source: Human feces [3605].
Biochemistry/Physiology: [3605].
Fatty acid: [3521].
Enzyme electrophoretic profile: [3863].
G+C (mol%): 40 (Tm) [3605].
DNA-DNA relatedness: [3605].
Phylogeny: 16S rRNA gene (AB510697) [8440,8884], dnaJ (AB619861) [8884], gyrB (AB619899) [8884], hsp60 (AB510669) [8355,8440,8884], recA (AB619937) [8884], rpoB (AB619975) [8884].
Genome sequence: AAVM00000000, CP022412, PUEQ00000000.
More information: Association with Japanese cedar pollinosis [7496].
NCBI Assembly ID: GCA_002222615 (GenBank), GCF_002222615 (RefSeq).
BacDive ID: 1617.
NCBI Taxonomy ID: 47678.

Publication(s) using this strain [A04177, A07171, A07269, A08007, A08012, A10209, A10221, A11280, A11289, B11344, B12117, B13416, A15589, A17070, A17155, A18008, A18129, A18143, A20079, A21209, A21512, A22122, A22493, A23091, A23150, A23486, A23488, A24048, A24131].

Patent publication(s) using this strain [WO2008/016334, US 20100112563 A1, 2023-116876, 2023-161983, 7279983].

Related information on delivery / use of the strain

Biosafety level	1	-
Terms and conditions	Not applicable	-
Export control ⁽¹⁾	No	-
Distribution control in Japan ⁽²⁾	No	-
Genetically modified microorganism	No	-
Technical information	-	-
Additional information	-	-

(1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
(2) in complying with the Plant Protection Law of Japan

Delivery category

Domestic	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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