JCM Catalogue


Rubrobacter indicoceani Chen et al. 2018

Taxonomy in NCBI database: Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacteraceae.

33406T <-- CGMCC 1.16398 <-- L.-J. Long and X.-P. Tian; South China Sea Inst. of Oceanol., CAS, China; SCSIO 08198.
Accessioned in 2019.
=CGMCC 1.16398 =DSM 105148.
Type strain [12414].
Medium: 1251;  Temperature: 28°C; Rehydration fluid: 656.

Source: Marine sediment from Indian Ocean at a depth of about 4602 m [12414].
Biochemistry/Physiology: [12414].
Cell wall: Type A3α (L-Lys-L-Ala) [12414].
Fatty acid: 12Me-C16:0, n-C17:1ω6c [12414].
Quinone: MK-8 [12414].
Polar lipid: DPG, PG [12414].
G+C (mol%): 63.8 (genome sequence), 64.2±0.5 (HPLC) [12414].
Phylogeny: 16S rRNA gene (MF919580) [12414].
Other taxonomic data: Average nucleotide identity [12414].
Genome sequence: CP031115, CP031116 (plasmid unnamed1), CP031117 (plasmid unnamed2) [12414].
NCBI Taxonomy ID: 2051957.

 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not imposed
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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