JCM Catalogue


Amycolatopsis echigonensis Ding et al. 2007

Taxonomy in NCBI database: Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales; Pseudonocardiaceae.

21832 <-- IAM 15388 <-- L. Ding LC11.
Accessioned in 2007.
=CCTCC AB 206020 =CIP 109735 =DSM 45165 =IAM 15388.
Amycolatopsis niigatensis.
Medium: 43, 57;  Temperature: 28°C; Rehydration fluid: 656.

Source: Filtration substrate made from volcanic soil, Niigata, Japan [7006].
Biochemistry/Physiology: [7006].
Cell wall: meso-A2pm; Ara, Gal (chemotype IV) [7006].
Fatty acid: [7006].
Quinone: MK-9(H4) [7006].
G+C (mol%): 72.4 (HPLC) [7006], 69.5 (genome sequence) [12227].
DNA-DNA relatedness: [7006].
Phylogeny: 16S rRNA gene (AB248537) [7006], gyrB (EU822905) [7869]; Genome BLAST distance phylogeny [14596].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [14596].
Genome sequence: PJMY00000000.
More information: Type strain of Amycolatopsis niigatensis [7006].
NCBI Assembly ID: GCA_002846615 (GenBank), GCF_002846615 (RefSeq).
BacDive ID: 13266.
NCBI Taxonomy ID: 369932.

Publication(s) using this strain [A11013].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
- Instructions for an order
- Go to JCM Top Page
- Go to List of JCM strains

Copyright © 2024 Microbe Division (JCM) - All Rights Reserved