JCM Catalogue

Halalkalibacterium ligniniphilum (Zhu et al. 2014) Joshi et al. 2022

Taxonomy in NCBI database: Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae.

18543T <-- D. Zhu L1.
Accessioned in 2012.
=DSM 26145.
Alkalihalobacillus ligniniphilus.
Bacillus ligniniphilus.
Type strain [10040,12816,13584,13605].
Medium: 181;  Temperature: 30°C; Rehydration fluid: 663.

Source: Sediment sample from the South China Sea [10040].
Biochemistry/Physiology: [10040].
Cell wall: meso-A2pm [100040].
Fatty acid: [10040].
Quinone: MK-7 [10040].
Polar lipid: DPG, PE, PG [10040].
G+C (mol%): 40.76 (genome sequence) [10065,13605].
DNA-DNA relatedness: [10040].
Phylogeny: 16S rRNA gene (JQ044788) [10040,13605]; Concatenated 92 conserved core genes [13605].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances, percentage of conserved proteins [13605].
Taxonomy: [12816].
Genome sequence: ANNK00000000 [10065].
More information: Utilizes lignin as a sole carbon source [10040].
NCBI Assembly ID: GCA_000334155 (GenBank), GCF_000334155 (RefSeq).
BacDive ID: 23714.
NCBI Taxonomy ID: 1134413.

Publication(s) using this strain [B14247, C17079].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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