JCM Catalogue

Pseudonocardia benzenivorans Kämpfer and Kroppenstedt 2004

Taxonomy in NCBI database: Bacteria; Bacillati; Actinomycetota; Actinomycetes; Pseudonocardiales; Pseudonocardiaceae.

13855 <-- DSM 44775 <-- S. Mahendra CB1190 <-- R. Parales.
Accessioned in 2006.
=ATCC 55486 =DSM 44775.
Pseudonocardia dioxanivorans.
Medium: 104; Temperature: 28°C; Rehydration fluid: 656.

Source: 1,4-Dioxane-contaminated industrial sludge, Darlington, SC, USA [6295].
Morphology: [6295].
Biochemistry/Physiology: [6295].
Cell wall: meso-A₂pm (type A1γ) [6295].
Fatty acid: [6295].
Quinone: MK-8(H₄), MK-7(H₄) [6295].
G+C (mol%): 74 (HPLC) [6295].
DNA-DNA relatedness: [15172].
Phylogeny: 16S rRNA gene (AY340622) [6295,15172]; fusA (EU722536), gyrB (EU722570), lepA (EU722595), rpoB (EU722625); Phylogenomic analysis [15172].
16S rRNA gene: AY340622 [6295].
Genome sequence: CP002593, CP002594 (plasmid pPSED01), CP002595 (plasmid pPSED02), CP002596 (plasmid pPSED02), CP002597 (plasmid pPSED02), CP002598 (plasmid pPSED03) [8999].
More information: Type strain of Pseudonocardia dioxanivorans [6295]; Degrades 1,4-dioxane [6295].
NCBI Assembly ID: GCA_000196675 (GenBank), GCF_000196675 (RefSeq).
BacDive ID: 13392.
NCBI Taxonomy ID: 240495.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12250.

Publication(s) using this strain [A16082].

Patent publication(s) using this strain [2016-202057, P2025-101853A].

Related information on delivery / use of the strain

Biosafety level		1
Terms and conditions		Not applicable
Export control ⁽¹⁾		No
Distribution control in Japan ⁽²⁾		No
Genetically modified microorganism		No
Technical information		-
Additional information		-

(1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
(2) in complying with the Plant Protection Law of Japan

Delivery category

Domestic	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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