JCM Catalogue

Phocaeicola plebeius (Kitahara et al. 2005) García-López et al. 2020

Taxonomy in NCBI database: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae.

12973^T <-- M. Kitahara M12.
Accessioned in 2005.
=DSM 17135.
Bacteroides plebeius.
Type strain [6132,12724,12970].
Medium: 14; Temperature: 37°C; Anaerobic.

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Source: Human feces [6132].
Biochemistry/Physiology: [6132].
Fatty acid: [6132].
Quinone: MK-10, MK-11 [6525].
G+C (mol%): 43.9 (HPLC) [6132].
DNA-DNA relatedness: [6132].
Phylogeny: 16S rRNA gene (AB200217) [6132,8440,8884], dnaJ (AB619885) [8884], gyrB (AB619923) [8884], hsp60 (AB510684) [8355,8440,8884], recA (AB619961) [8884], rpoB (AB619999) [8884].
Taxonomy: [12724,12970].
Genome sequence: ABQC00000000.
More information: Association with Japanese cedar pollinosis [7496].
NCBI Assembly ID: GCA_000187895 (GenBank), GCF_000187895 (RefSeq).
BacDive ID: 1607.
NCBI Taxonomy ID: 310297.

Publication(s) using this strain [B05106, B06146, A08012, A08170, A10209, A10221, A11289].

Related information on delivery / use of the strain

Biosafety level		1
Terms and conditions		Not applicable
Export control ⁽¹⁾		No
Distribution control in Japan ⁽²⁾		No
Genetically modified microorganism		No
Technical information		-
Additional information		-

(1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
(2) in complying with the Plant Protection Law of Japan

Delivery category

Domestic	F (Frozen culture with dry ice) or C (Actively growing culture on request)
Overseas	F (Frozen culture with dry ice)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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