JCM Catalogue

Porphyromonas gingivalis (Coykendall et al. 1980) Shah and Collins 1988

Taxonomy in NCBI database: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae.

12257T <-- CIP 103683 <-- J. P. Carlier AIP 10005 <-- ATCC 33277 <-- A. L. Coykendall 2561 <-- J. Slots.
Accessioned in 2003.
=ATCC 33277 =CCUG 25893 =CCUG 25928 =CIP 103683 =DSM 20709 =NCTC 11834.
Bacteroides gingivalis.
Type strain [3113,5559].
Medium: 469;  Temperature: 37°C; Anaerobic [H2-CO2-N2 (1:1:8) gas mixture]; Rehydration fluid: 663.

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Source: Human gingival sulcus [5559].
Morphology: [5559].
Biochemistry/Physiology: [3525,5559].
Fatty acid: [3525].
G+C (mol%): 47.1 (Tm) [5559].
DNA-DNA relatedness: [3525,5559,10682].
Phylogeny: 16S rRNA gene (AB547660), hsp60 (AB547581) [8355].
Genome sequence: AP009380 [8221], CP025930.
NCBI Assembly ID: GCA_000010505 (GenBank), GCF_000010505 (RefSeq).
BacDive ID: 12506.
NCBI Taxonomy ID: 837.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD06613.

Publication(s) using this strain [A08012, A10221, A12035, A12273, A12386, A13101, A13119, A14520, B15602, A15607, A18001, A18088, A18129, A19521, A20109, A21424, A22388, A22542].
Patent publication(s) using this strain [JP2009-137869A, JP2010-265215A, JP2010-037219A, 2015-127305, WO2017/199453, 2017-093358, 2017-019763, 2018-184389, 2018-020989, 2018-002614, 2019-214538, 2019-149971, 2020-109071].
 Related information on delivery / use of the strain
Biosafety level 2
Terms and conditions Not applicable -
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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