JCM Catalogue

Rubrobacter xylanophilus Carreto et al. 1996

Taxonomy in NCBI database: Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacteraceae.

11954T <-- CIP 105412 <-- F. Nobre PRD-1.
Accessioned in 2003.
=CIP 105412 =DSM 9941 =IFO 16129 =NBRC 16129 =NBRC 100952.
Type strain [5391].
Medium: 48;  Temperature: 60°C; Rehydration fluid: 656.

Source: Thermally polluted runoff (temperature, 50C) from a carpet factory in Wilton, Wiltshire, UK [5391].
Biochemistry/Physiology: [5391].
Cell wall: Lys, Glu, Ala (type A3α) [5391].
Fatty acid: [5391].
Quinone: MK-8 [5391].
Polar lipid: PG, DPG [5391].
G+C (mol%): 67.6 (Tm) [5391], 70.5 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (X87135) [5391].
Genome sequence: CP000386 (http://genome.jgi-psf.org/finished_microbes/rubxy/rubxy.home.html).
NCBI Assembly ID: GCA_000014185 (GenBank), GCF_000014185 (RefSeq).
BacDive ID: 14036.
NCBI Taxonomy ID: 49319.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07521.

Publication(s) using this strain [A19032].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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