JCM Catalogue

Pseudomonas putida (Trevisan 1889) Migula 1895
Taxonomy in NCBI database: Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae.
13063T <-- K. Komagata <-- R. Hugh 827 <-- ATCC 12633 <-- A. B. Pardee <-- R. Y. Stanier A.3.12.
Accessioned in 2005.
=ATCC 12633 =ATCC 23467 =BCRC 10459 =CCM 7156 =CCUG 2091 =CCUG 12690 =CECT 324 =CFBP 2066 =CIP 52.191 =DSM 291 =DSM 50202 =DSM 50906 =HAMBI 7 =HUT 8100 =IAM 1236 =ICMP 2758 =IFO 14164 =JCM 3697 =KCTC 1644 =KCTC 1751 =LMG 2257 =NBRC 14164 =NCCB 72006 =NCCB 68020 =NCIMB 9494 =NCIMB 9528 =NCIMB 13936 =NCTC 10936 =VKM B-1301 =VKM B-2187 =VTT E-92005.
Type strain [596].
Medium: 12, 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top

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Biochemistry/Physiology: [530].
Phylogeny: 16S rRNA gene (AF094736, LC507960), rpoD (AB039581).
Taxonomy: [530,2027].
Genome sequence: AP013070 [12614], UGUX00000000.
More information: Uptake of 2-ketogluconate [2025]; Effect of a non-metabolizable analog on mandelate catabolism [2023]; Properties of an inducible uptake system for β-ketoadipate [2019].
Production: Acetic acid from ethanol [2016].
NCBI Assembly ID: GCA_000412675 (GenBank), GCF_000412675 (RefSeq).
BacDive ID: 12871.
NCBI Taxonomy ID: 303.
Publication(s) using this strain [A07252, A10317, A14076, A14447, A16461, A18476, A23093, A23417].
Patent publication(s) using this strain [2015-77103, WO/2015/174364].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
6156 <-- ATCC 33015 <-- P. A. Williams mt-2 <-- G. D. Hegeman.
Accessioned in 1987.
=ATCC 33015 =BCRC 10460.
Medium: 121;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Phylogeny: 16S rRNA gene (AB598738, D37924), gyrB (D37926), rpoD (AB039590).
More information: TOL plasmid.
BacDive ID: 12880.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD17445.
Publication(s) using this strain [A07191, A09241, A10224, A11246, A20129, A20173].
Patent publication(s) using this strain [JP2007-316063A, JP2011-193857A, JP2011-200182A, JP2011-217737A, 2021-40614].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
6157 <-- ATCC 17453 <-- R. Y. Stanier 77 <-- I. C. Gunsalus C 1-B.
Accessioned in 1987.
=ATCC 17453 =DSM 50198 =KCTC 1646.
Medium: 22;  Temperature: 26°C; Rehydration fluid: 663.   more information +
Phylogeny: 16S rRNA gene (AF094746, JN630891).
Other taxonomic data: Biotype A.
BacDive ID: 12921.
Publication(s) using this strain [A07013, A08021, A13489, A22473, A23417].
Patent publication(s) using this strain [JP2011-193857A, JP2011-200182A, JP2011-217737A, 2015-164416, AU2015215750, 2017-121203].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
9045 <-- N. Kato F61.
Accessioned in 1993.
Medium: 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Soil, Tottori Pref., Japan [3357].
More information: Formaldehyde dismutase [3357,3358,3359,3360].
BacDive ID: 165987.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
9800 <-- T. Kudo HR3.
Accessioned in 1996.
Medium: 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Soil, Japan.
More information: Degrades chlorinated benzoate.
BacDive ID: 166071.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
9802 <-- T. Kudo CE2010.
Accessioned in 1996.
Medium: 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Activated sludge, Kanagawa, Japan by enrichment with biphenyl as the sole source of carbon and energy [9703].
Phylogeny: 16S rRNA gene (partial) (D87102).
More information: An organic solvent-tolerant bacterium utilizing biphenyl and toluene [9703]; Genes for biphenyl and toluene catabolism [8204].
BacDive ID: 166073.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
13061 <-- K. Komagata <-- R. Hugh 821 <-- ATCC 11172 <-- NCIMB 8251 <-- W. C. Evans.
Accessioned in 2005.
=ATCC 11172 =BCRC 14349 =DSM 6521 =NCAIM B.01522 =NCCB 92006 =NCIMB 8251.
Medium: 12;  Temperature: 30°C; Rehydration fluid: 663.   more information +
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Phylogeny: 16S rRNA gene (AF094745, D85992) [6082], 16S rRNA gene (LC507958), gyrB (D86006) [6082], rpoD (AB039580, D86024) [6082].
Other taxonomic data: Biotype I [6081].
More information: Degradation of phenol [6081].
BacDive ID: 12901.
Publication(s) using this strain [A07191, A08182, A10224, A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
13062 <-- K. Komagata <-- R. Hugh 822 <-- ATCC 11250 <-- O. Hayaishi Tr. 23 <-- S. H. Hutner.
Accessioned in 2005.
=ATCC 11250 =CCM 3656 =KCTC 1645 =NCIMB 10098.
Medium: 12, 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +
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Phylogeny: 16S rRNA gene (AF095892, LC507959), rpoB (JN673406).
More information: The 16S rRNA gene sequence of this strain has 97.0% similarity to that of the type strain of Pseudomonas putida (D84020).
BacDive ID: 161309.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
14351 <-- K. Komagata <-- R. Hugh 1310 <-- ATCC 598 <-- B. W. Hammer ("Pseudomonas mildenbergii").
Accessioned in 2006.
=ATCC 598 =NRRL B-251.
Medium: 75;  Temperature: 30°C; Rehydration fluid: 663.   more information +
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Genome sequence: RWKE00000000.
NCBI Assembly ID: GCA_005930605 (GenBank), GCF_005930605 (RefSeq).
BacDive ID: 161475.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
18452 <-- M. Tsuda <-- K. Furukawa <-- A. M. Chakrabarty <-- I. C. Gunsalus G7 <-- W. R. Sistrom 53-2.
Accessioned in 2012.
=ATCC 17485 =BCRC 10461 =DSM 50208 =JCM 6158 =KCTC 1642 =NCIMB 12092.
Medium: 443;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Soil with naphthalene enrichment [530].
Phylogeny: 16S rRNA gene (D85994), rpoD (AB039582).
More information: Utilizes naphthalene as a sole source of carbon and energy [530,9494]; Naphthalene degradative genes [9495,9496]; Naphthalene degradative IncP-9 plasmid (NAH7) [9497,9498].
BacDive ID: 12922.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12615.
Publication(s) using this strain [C15100].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
18798 <-- N. Takizawa <-- H. Kiyohara OUS82.
Accessioned in 2013.
Medium: 443;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Soil, Okayama, Japan.
More information: Utilizes naphthalene and phenanthrene [9487]; Catabolic gene cluster for naphthalene and phenanthrene degradation [9488,9489]; Characterization of biofilm formation [9490,9491].
BacDive ID: 162298.
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20004 <-- IAM 1002 <-- K. Arima et al. S-5.
Accessioned in 2007.
=IAM 1002.
"Pseudomonas ovalis".
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Phylogeny: 16S rRNA gene (LC571911).
BacDive ID: 162685.
Publication(s) using this strain [A07001, A11314, A18068, A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20005 <-- IAM 1003 <-- K. Yokozawa 44F.
Accessioned in 2007.
=IAM 1003.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Canal water.
Phylogeny: 16S rRNA gene (LC571912).
BacDive ID: 162686.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20028 <-- IAM 1049 <-- K. Arima et al. A-10-3.
Accessioned in 2007.
=IAM 1049.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Phylogeny: 16S rRNA gene (LC571920).
BacDive ID: 162700.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20029 <-- IAM 1050 <-- S. Ikemoto KS 0010 <-- H. Iizuka and K. Komagata CB-3.
Accessioned in 2007.
=IAM 1050.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Japanese unhulled rice.
Phylogeny: 16S rRNA gene (LC571921).
BacDive ID: 162701.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20045 <-- IAM 1090 <-- K. Arima et al. R-3-1.
Accessioned in 2007.
=IAM 1090.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
Phylogeny: 16S rRNA gene (LC571924).
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20048 <-- IAM 1094 <-- Yoshida strain Y.
Accessioned in 2007.
=IAM 1094.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Phylogeny: 16S rRNA gene (LC571927).
BacDive ID: 162713.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20066 <-- IAM 1128 <-- H. Yazaki C-591.
Accessioned in 2007.
=IAM 1128.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Phylogeny: 16S rRNA gene (LC571932).
BacDive ID: 162723.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20089 <-- IAM 1177 <-- K. Yokozawa 26F.
Accessioned in 2007.
=IAM 1177.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Cistern (water).
Phylogeny: 16S rRNA gene (LC571940).
BacDive ID: 162741.
Publication(s) using this strain [A10083, A13541, A14486, A15610, A23413, A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20102 <-- IAM 1200 <-- K. Yokozawa 34F.
Accessioned in 2007.
=IAM 1200.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Cistern (water).
Phylogeny: 16S rRNA gene (LC595301).
BacDive ID: 162752.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20111 <-- IAM 1218 <-- K. Yokozawa 38F.
Accessioned in 2007.
=IAM 1218.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Fishpond.
Phylogeny: 16S rRNA gene (LC595303).
BacDive ID: 162760.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20112 <-- IAM 1219 <-- K. Arima <-- R. Y. Stanier A-3-8 (=89).
Accessioned in 2007.
=ATCC 17464 =IAM 1219.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Soil by malate enrichment.
Phylogeny: 16S rRNA gene (LC595304).
BacDive ID: 162761.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20120 <-- IAM 1235 <-- K. Yokozawa 40F.
Accessioned in 2007.
=IAM 1235.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Fishpond (water).
Phylogeny: 16S rRNA gene (LC595308).
BacDive ID: 162768.
NCBI Taxonomy ID: 303.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20129 <-- IAM 1250 <-- K. Yokozawa 41F.
Accessioned in 2007.
=IAM 1250.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Surface water of a river.
Phylogeny: 16S rRNA gene (LC595310).
BacDive ID: 162775.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20187 <-- IAM 1505 <-- ATCC 795 <-- B. W. Hammer ("Pseudomonas cyanogena").
Accessioned in 2007.
=ATCC 795 =IAM 1505 =NRRL B-21 =NRRL B-252.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Blue milk.
Genome sequence: RWKF00000000.
NCBI Assembly ID: GCA_005930545 (GenBank), GCF_005930545 (RefSeq).
BacDive ID: 134979.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20188 <-- IAM 1506 <-- ATCC 4359 <-- A. Stewart.
Accessioned in 2007.
=ATCC 4359 =IAM 1506.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Phylogeny: 16S rRNA gene (LC595320).
BacDive ID: 162804.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20228 <-- IAM 1629 <-- S. Ikemoto KS 0035 <-- H. Iizuka and K. Komagata F-7.
Accessioned in 2007.
=IAM 1629.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Source: Japanese unhulled rice.
Phylogeny: 16S rRNA gene (LC654885).
BacDive ID: 162815.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20347 <-- IAM 12014 <-- IFO 3757 ("Pseudomonas syncyanea") <-- BUCSAV 295 <-- ATCC 9979 <-- W. C. Tobie <-- A. J. Kluyver.
Accessioned in 2007.
=ATCC 9979 =BUCSAV 295 =IAM 12014 =IFO 3757 =NBRC 3757 =NCIMB 9495 =NRRL B-652.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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BacDive ID: 138860.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20511 <-- IAM 12355 <-- IFO 3738 <-- BUCSAV 290 <-- NCIB 8296 <-- ATCC 8209 <-- N. R. Smith NRS 77.
Accessioned in 2007.
=ATCC 8209 =BUCSAV 290 =CCEB 380 =CCM 1977 =CIP 59.17 =DSM 1693 =IAM 12355 =IFO 3738 =LMG 2232 =NBRC 3738 =NCIMB 8296 =NRRL B-1595.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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Phylogeny: 16S rRNA gene (D85999), gyrB (D86012), rpoD (D86029).
BacDive ID: 12874.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
21368 <-- IAM 14870 <-- NCIMB 11286 <-- BKM BN-1122.
Accessioned in 2007.
=CIP 107361 =DSM 7314 =IAM 14870 =IMET 11317 =KCTC 9839 =LMG 16206 =NCIMB 11286 =VKM B-1122.
Arthrobacter siderocapsulatus.
Medium: 75;  Temperature: 25°C; Rehydration fluid: 663.   more information +
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More information: Type strain of Arthrobacter siderocapsulatus [596].
BacDive ID: 12908.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
31910 <-- DSM 6899 <-- D. T. Gibson; F1.
Accessioned in 2017.
=ATCC 700007 =BCRC 17059 =DSM 6899 =LMG 24140 =VTT E-022152.
Medium: 27, 1199;  Temperature: 28°C; Rehydration fluid: 663.   more information +
Phylogeny: 16S rRNA gene (L37365, D87108).
Genome sequence: CP000712.
NCBI Assembly ID: GCA_000016865 (GenBank), GCF_000016865 (RefSeq).
BacDive ID: 12904.
Publication(s) using this strain [A23417].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
6160 <-- ATCC 17633 <-- R. Y. Stanier 266.
Accessioned in 1987.
=ATCC 17633.
Pseudomonas putida.
Medium: 22;  Temperature: 26°C; Rehydration fluid: 663.   more information +
Biochemistry/Physiology: [530].
Taxonomy: [530].
More information: 16S rRNA gene partial sequence of this strain has 100% similarity to that of Pseudomonas plecoglossicida; Cataloged as Pseudomonas putida until May 2016.
BacDive ID: 165352.
Publication(s) using this strain [A13497].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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