JCM Catalogue

"Nocardia opaca" (den Dooren de Jong) Waksman and Henrici

Taxonomy in NCBI database: Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae.

9703 <-- DSM 43205 <-- IMG, 1b <-- D. Siebert 1B.
Accessioned in 1995.
=ATCC 51881 =CGMCC 4.1820 =CIP 104549 =DSM 427 =DSM 43205 =IFO 16217 =KCTC 9811 =LMG 18000 =NBRC 16217 =NBRC 100624 =NCIMB 10810 =NCIMB 13353.
"Nocardia opaca".
Proposed type strain [3732,10702].
Medium: 57; Temperature: 28°C; Rehydration fluid: 656. more information + Full / Short version of the cataloguepage top

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Source: Soil from the surroundings of a defective town gas pipe [3732].
Biochemistry/Physiology: [3732].
Cell wall: meso-A₂pm; Ara, Gal; N-glycolyl Mur [3732].
Fatty acid: [3732].
Quinone: MK-8(H₂) [3732].
Polar lipid: DPG, PG, PI, PIM, PE [3732].
G+C (mol%): 67.6 (HPLC) [3732].
Phylogeny: 16S rRNA gene (KF410349, X80630) [3951], 16S rRNA gene (LN827918) (clone 1), 16S rRNA gene (LN827919) (clone 2), 16S rRNA gene (LN827920) (clone 3), 16S rRNA gene (LN827921) (clone 4), 16S rRNA gene (LN827922) (clone 5).
Other taxonomic data: Mycolic acid [3732].
Genome sequence: JAAXPA000000000, LRRG00000000.
NCBI Assembly ID: GCA_012396235 (GenBank), GCF_012396235 (RefSeq).
BacDive ID: 10998.
NCBI Taxonomy ID: 37919.

Publication(s) using this strain [A07249, A16082, A18111, A18566].

Patent publication(s) using this strain [JP2008-193976A, WO2008/072547].

Related information on delivery / use of the strain

Biosafety level		1
Terms and conditions		Not applicable
Export control ⁽¹⁾		No
Distribution control in Japan ⁽²⁾		No
Genetically modified microorganism		No
Technical information		-
Additional information		-

(1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
(2) in complying with the Plant Protection Law of Japan

Delivery category

Domestic	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

3192 <-- KCC A-0192 <-- AJ 9110 <-- NCIB 9409 <-- D. M. Webley T16 <-- D. Erikson.
Accessioned in 1983.
=DSM 43135 =IMET 7471 =NCIMB 9409.
"Nocardia opaca".
"Mycobacterium opacum".
Medium: 57; Temperature: 28°C; Rehydration fluid: 656. more information +

Source: Soil [8723].
Cell wall: meso-A₂pm; Ara, Gal [744].
Taxonomy: [486].
More information: Metabolism of aliphatic hydrocarbons, alcohols and fatty acids [8723,8724,8725].
BacDive ID: 10864.

Related information on delivery / use of the strain

Biosafety level		1
Terms and conditions		Not applicable
Export control ⁽¹⁾		No
Distribution control in Japan ⁽²⁾		No
Genetically modified microorganism		No
Technical information		-
Additional information		-

(1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
(2) in complying with the Plant Protection Law of Japan

Delivery category

Domestic	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

This product was produced by the KCC (Kaken Pharm. Co., Ltd.) Culture Collection of Actinomycetes (KCC) and transferred to JCM in 1983. Viability and purity assays were performed by KCC at the time of production. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the nuclear ITS region of the rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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