JCM Catalogue

Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002
Taxonomy in NCBI database: Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae.
39207 <-- DSM 107838 <-- B. Fitzgerald; Univ. Coll. Cork, Ireland; APC918/95b.
Accessioned in 2021.
=DSM 107838.
Medium: 1130;  Temperature: 37°C; Anaerobic.   more information +  Full / Short version of the cataloguepage top

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Source: Human feces of 25-years-old female, Cork, Ireland [12648].
Biochemistry/Physiology: [13666].
Fatty acid: [13666].
Quinone: [13666].
G+C (mol%): 56.4 (genome sequence) [12648].
Phylogeny: 245 highly conserved proteins [12648], concatenated 92 conserved core genes [13666].
Other taxonomic data: Average nucleotide identity [12648,13666], genome-to-genome distances [13666].
Genome sequence: CP030777 [12648].
More information: Phylogroup I [12648].
NCBI Assembly ID: GCA_003312465 (GenBank), GCF_003312465 (RefSeq).
BacDive ID: 159475.
Publication(s) using this strain [A22280, A24398, A24467].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic F (Frozen culture with dry ice) or C (Actively growing culture on request)
Overseas F (Frozen culture with dry ice)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
39209 <-- DSM 107840 <-- B. Fitzgerald; Univ. Coll. Cork, Ireland; APC924/119.
Accessioned in 2021.
=DSM 107840.
Medium: 1130;  Temperature: 37°C; Anaerobic.   more information +
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Source: Human feces of 44-years-old female, Cork, Ireland [12648].
Biochemistry/Physiology: [13666].
Fatty acid: [13666].
Quinone: [13666].
G+C (mol%): 56.4 (genome sequence) [12648].
Phylogeny: 245 highly conserved proteins [12648], concatenated 92 conserved core genes [13666].
Other taxonomic data: Average nucleotide identity [12648], genome-to-genome distances [13666].
Genome sequence: PRLF00000000 [12648].
More information: Phylogroup I [12648].
NCBI Assembly ID: GCA_003287475 (GenBank), GCF_003287475 (RefSeq).
BacDive ID: 159477.
Publication(s) using this strain [A22280, A24498].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic F (Frozen culture with dry ice) or C (Actively growing culture on request)
Overseas F (Frozen culture with dry ice)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
31915 <-- DSM 17677 <-- S. Duncan; A2-165 <-- A. Barcenilla.
Accessioned in 2017.
=DSM 17677.
Faecalibacterium prausnitzii.
Fusobacterium prausnitzii.
Type strain [13666].
Medium: 1130;  Temperature: 37°C; Anaerobic.   more information +
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Source: Human feces [11459].
Biochemistry/Physiology: [11459,13666,14180].
Fatty acid: [13666,14180].
Quinone: [13666].
G+C (mol%): 49 (Tm) [11459], 56.3 (genome sequence) [13666].
Phylogeny: 16S rRNA gene (AJ270469, LC723851) [11459], 245 highly conserved proteins [12648], concatenated 92 conserved core genes [13666].
Other taxonomic data: Average nucleotide identity [12644,12648,13666,14180], genome-to-genome distances [13666,14180].
Genome sequence: CP048437, CP022479 [13666].
More information: Butyrate-producing bacterium [11459], taxonomic opinion [12647], neotype strain [12648,13523], fructooligosaccharide metabolism [13209], phylogroup II [12648], specific primer [14019].
NCBI Assembly ID: GCA_010509575 (GenBank), GCF_010509575 (RefSeq).
BacDive ID: 17680.
NCBI Taxonomy ID: 411483.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD15999.
Publication(s) using this strain [A19099, A19397, A20155, A20541, A21207, A21483, A21522, A21549, A22280, A22477, A22496, A22524, A23117, A23124, A23150, A23292, A23488, A24280].
Patent publication(s) using this strain [WO2018/079793, 2021-193895, 2022-103708, 2022-52715, 7279983, P2024-80650A].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information This strain is extremely sensitive towards oxygen! Growth on agar plates is not possible with gas packs.
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic F (Frozen culture with dry ice) or C (Actively growing culture on request)
Overseas F (Frozen culture with dry ice)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
39210 <-- DSM 107841 <-- B. Fitzgerald; Univ. Coll. Cork, Ireland; APC922/41-1.
Accessioned in 2021.
=DSM 107841.
Faecalibacterium prausnitzii.
Type strain [13666].
Medium: 1130;  Temperature: 37°C; Anaerobic.   more information +
open link in new window
Source: Human feces of 30-years-old male, Cork, Ireland [12648].
Biochemistry/Physiology: [13666].
Fatty acid: [13666].
Quinone: [13666].
G+C (mol%): 57.7 (genome sequence) [12648,13666].
Phylogeny: 16S rRNA gene (LC670256), 245 highly conserved proteins [12648], concatenated 92 conserved core genes [13666].
Other taxonomic data: Average nucleotide identity [12648,13666], genome-to-genome distances [13666].
Genome sequence: PRLC00000000 [12648].
More information: Phylogroup II [12648], specific primer [14019].
NCBI Assembly ID: GCA_003287455 (GenBank), GCF_003287455 (RefSeq).
BacDive ID: 159478.
NCBI Taxonomy ID: 2935520.
Publication(s) using this strain [A22280, A23124, A24280].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic F (Frozen culture with dry ice) or C (Actively growing culture on request)
Overseas F (Frozen culture with dry ice)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
39208 <-- DSM 107839 <-- B. Fitzgerald; Univ. Coll. Cork, Ireland; APC942/30-2.
Accessioned in 2021.
=DSM 107839.
Faecalibacterium prausnitzii.
Medium: 1130;  Temperature: 37°C; Anaerobic.   more information +
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Source: Human feces of 34-years-old male, Cork, Ireland [12648].
Biochemistry/Physiology: [13666].
Fatty acid: [13666].
Quinone: [13666].
G+C (mol%): 57.2 (genome sequence) [12648].
Phylogeny: 245 highly conserved proteins [12648], concatenated 92 conserved core genes [13666].
Other taxonomic data: Average nucleotide identity [12648,13666], genome-to-genome distances [13666].
Taxonomy: [13666].
Genome sequence: CP026548 [12648].
More information: Phylogroup II [12648].
NCBI Assembly ID: GCA_003293635 (GenBank), GCF_003293635 (RefSeq).
Publication(s) using this strain [A22280, A24280].
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic F (Frozen culture with dry ice) or C (Actively growing culture on request)
Overseas F (Frozen culture with dry ice)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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