Summary of assembly and annotation
 
 Scientific name   JCM no.
 Acremonium furcatum   9210
Genome assembly:
ALLPATHS-LG (ver. 52488)
Genome assembly ver. 001
Estimated genome size   45,137,850
Sequence coverage   211
# of contigs   95
Total length (contigs)   40,258,417
N50 (contigs)   1,064,050
# of scaffolds   9
Total scaffold length (with gaps)   40,320,693
% gaps   0.2
N50 (scaffold)   5,970,797
GC%   57.7
Gene prediction:
  MAKER annotation pipeline (release 2.31.8)
    Gene predictors used: Augustus (3.0.3), SNAP (2013-02-16), GeneMark-ES (Suite 4.21)
    Reference used: Acremonium alcalophilum
    tRNAscan-SE (version 1.23)
  Infernal cmscan (version 1.1.1)
    Database used: Rfam (Release 12.0)
Functional annotaion:
  Sma3S: 2013-09-01
    Database used: Uniprot-TrEMBL (release 2015_11), Uniprot-sprot (release 2015_11)
Gene prediction & funcational annotation ver. 001
# of predicted gene models   14,492
# of predicted transcript models   14,492
Average transcript length (bp)   1,624
Average coding length (bp)   1,450
Average protein length (aa)   483
Average number of exons per gene model   2.8
Average exon size (bp)   522
Average intron size (bp)   95
# of non-coding RNA   296
# of functionally annotated genes trembl   12,426
# of functionally annotated genes sprot   3,288
CEGMA complete (%)   95.97
CEGMA partial (%)   97.58

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