Summary of assembly and annotation
 
 Scientific name   JCM no.
 Exophiala calicioides   6030
Genome assembly:
ALLPATHS-LG (ver. 52155)
Genome assembly ver. 001
Estimated genome size   40,981,272
Sequence coverage   112
# of contigs   125
Total length (contigs)   36,316,401
N50 (contigs)   657,640
# of scaffolds   37
Total scaffold length (with gaps)   36,366,738
% gaps   0.1
N50 (scaffold)   7,540,789
GC%   52.8
Gene prediction:
  MAKER annotation pipeline (release 2.31.8)
    Gene predictors used: Augustus (3.0.3), SNAP (2013-02-16), GeneMark-ES (Suite 4.21)
    Reference used: Aspergillus oryzae
    tRNAscan-SE (version 1.23)
  Infernal cmscan (version 1.1.1)
    Database used: Rfam (Release 12.0)
Functional annotaion:
  Sma3S: 2013-09-01
    Database used: Uniprot-TrEMBL (release 2015_11), Uniprot-sprot (release 2015_11)
Gene prediction & funcational annotation ver. 001
# of predicted gene models   14,071
# of predicted transcript models   14,071
Average transcript length (bp)   1,563
Average coding length (bp)   1,420
Average protein length (aa)   473
Average number of exons per gene model   2.5
Average exon size (bp)   577
Average intron size (bp)   94
# of non-coding RNA   208
# of functionally annotated genes trembl   12,317
# of functionally annotated genes sprot   2,902
CEGMA complete (%)   95.56
CEGMA partial (%)   97.18