Summary of assembly and annotation
 
 Scientific name   JCM no.
 Trichosporon faecale   2941
Genome assembly:
ALLPATHS-LG (ver. 52155)
Genome assembly ver. 001
Estimated genome size   27,661,698
Sequence coverage   187
# of contigs   87
Total length (contigs)   24,586,463
N50 (contigs)   722,495
# of scaffolds   29
Total scaffold length (with gaps)   24,655,752
% gaps   0.3
N50 (scaffold)   3,677,148
GC%   60.2
Gene prediction:
  MAKER annotation pipeline (release 2.31.8)
    Gene predictors used: Augustus (3.0.3), SNAP (2013-02-16), GeneMark-ES (Suite 4.21)
    Reference used: Cryptococcus neoformans
    tRNAscan-SE (version 1.23)
  Infernal cmscan (version 1.1.1)
    Database used: Rfam (Release 12.0)
Functional annotaion:
  Sma3S: 2013-09-01
    Database used: Uniprot-TrEMBL (release 2015_11), Uniprot-sprot (release 2015_11)
Gene prediction & funcational annotation ver. 001
# of predicted gene models   8,887
# of predicted transcript models   8,887
Average transcript length (bp)   1,999
Average coding length (bp)   1,449
Average protein length (aa)   483
Average number of exons per gene model   3.6
Average exon size (bp)   404
Average intron size (bp)   81
# of non-coding RNA   503
# of functionally annotated genes trembl   7,724
# of functionally annotated genes sprot   1,866
CEGMA complete (%)   92.74
CEGMA partial (%)   95.56

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