Summary of assembly and annotation
 
 Scientific name   JCM no.
 Bullera koratensis   12878
Genome assembly:
ALLPATHS-LG (ver. 52488)
Genome assembly ver. 001
Estimated genome size   26,985,997
Sequence coverage   169
# of contigs   239
Total length (contigs)   25,079,831
N50 (contigs)   212,820
# of scaffolds   31
Total scaffold length (with gaps)   25,142,362
% gaps   0.2
N50 (scaffold)   1,454,648
GC%   54.9
Gene prediction:
  MAKER annotation pipeline (release 2.31.8)
    Gene predictors used: Augustus (3.0.3), SNAP (2013-02-16), GeneMark-ES (Suite 4.21)
    Reference used: Cryptococcus neoformans
    tRNAscan-SE (version 1.23)
  Infernal cmscan (version 1.1.1)
    Database used: Rfam (Release 12.0)
Functional annotaion:
  Sma3S: 2013-09-01
    Database used: Uniprot-TrEMBL (release 2015_11), Uniprot-sprot (release 2015_11)
Gene prediction & funcational annotation ver. 001
# of predicted gene models   9,520
# of predicted transcript models   9,520
Average transcript length (bp)   1,859
Average coding length (bp)   1,474
Average protein length (aa)   491
Average number of exons per gene model   5.6
Average exon size (bp)   263
Average intron size (bp)   82
# of non-coding RNA   336
# of functionally annotated genes trembl   6,248
# of functionally annotated genes sprot   1,944
CEGMA complete (%)   93.15
CEGMA partial (%)   93.95