Summary of assembly and annotation
 
 Scientific name   JCM no.
 Millerozyma acaciae   10732
Genome assembly:
ALLPATHS-LG (ver. 52488)
Genome assembly ver. 001
Estimated genome size   13,923,903
Sequence coverage   155
# of contigs   30
Total length (contigs)   11,056,372
N50 (contigs)   778,428
# of scaffolds   10
Total scaffold length (with gaps)   11,065,882
% gaps   0.1
N50 (scaffold)   1,450,032
GC%   41.4
Gene prediction:
  MAKER annotation pipeline (release 2.31.8)
    Gene predictors used: Augustus (3.0.3), SNAP (2013-02-16), GeneMark-ES (Suite 4.21)
    Reference used: Pichia stipitis
    tRNAscan-SE (version 1.23)
  Infernal cmscan (version 1.1.1)
    Database used: Rfam (Release 12.0)
Functional annotaion:
  Sma3S: 2013-09-01
    Database used: Uniprot-TrEMBL (release 2015_11), Uniprot-sprot (release 2015_11)
Gene prediction & funcational annotation ver. 001
# of predicted gene models   5,217
# of predicted transcript models   5,217
Average transcript length (bp)   1,617
Average coding length (bp)   1,567
Average protein length (aa)   522
Average number of exons per gene model   1.2
Average exon size (bp)   1,306
Average intron size (bp)   231
# of non-coding RNA   354
# of functionally annotated genes trembl   4,672
# of functionally annotated genes sprot   2,728
CEGMA complete (%)   95.16
CEGMA partial (%)   95.56