JCM Catalogue

Extibacter muris Lagkouvardos et al. 2017

Taxonomy in NCBI database: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae.

35582^T <-- KCTC 15546 <-- DSM 28560 <-- T. Clavel; Tech. Univ. of Munich, Germany; 40ccB-5824-ARE.
Accessioned in 2022.
=DSM 28560 =KCTC 15546.
Type strain [11442,12124].
Medium: 677; Temperature: 37°C; Anaerobic [H₂-CO₂-N₂ (1:1:8) gas mixture]; Rehydration fluid: 663.

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Source: Caecal content (mouse instine), TNF^deltaARE/+ C57BL/6 mouse, Freising, Germany [12124].
Biochemistry/Physiology: [12124].
Fatty acid: [12124].
G+C (mol%): 47.9 (genome sequence) [12124].
Phylogeny: 16S rRNA gene (KR364761).
Other taxonomic data: Genome-to-genome distances, percentage of conserved proteins [12124].
Genome sequence: SMMX00000000.
More information: This strain metabolizes cholic acid (CA) to deoxycholic acid (DCA) via 7α-dehydroxylation [13946].
NCBI Assembly ID: GCA_004345005 (GenBank), GCF_004345005 (RefSeq).
NCBI Taxonomy ID: 1796622.

Related information on delivery / use of the strain

Biosafety level		1
Terms and conditions		Not applicable
Export control ⁽¹⁾		No
Distribution control in Japan ⁽²⁾		No
Genetically modified microorganism		No
Technical information		-
Additional information		-

(1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
(2) in complying with the Plant Protection Law of Japan

Delivery category

Domestic	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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