JCM Catalogue

"Agrobacterium oryzihabitans" Ma et al.

Taxonomy in NCBI database: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae.

32903^T <-- G. Zhang; CAAS, China; M15.
Accessioned in 2018.
=ACCC 60121.
"Rhizobium oryzihabitans".
Proposed type strain [14357,14361].
Medium: 74, 254; Temperature: 30°C; Rehydration fluid: 663.

Source: Surface-sterilized rice roots from Beijing, China [14361].
Morphology: [14361].
Biochemistry/Physiology: [14361].
Fatty acid: [14361].
G+C (mol%): 59.28 (genome sequence) [14361].
Phylogeny: 16S RNA gene (MT023790), multilocus sequence analysis (atpD, recA, rpoB (MT028483, MT028481, MT028482)), concatenated 2006 core proteins [14361]; Concatenated 92 conserved core genes, concatenated 170 single-copy proteins [14357].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [14361]; Average amino acid identity, percentage of conserved proteins [14357].
Genome sequence: CP048632 (chromosome M15-11), CP048635 (chromosome M15-12), CP048633 (plasmid p1), CP048634 (plasmid p2), CP048636 (plasmid p4), CP048637 (plasmid p5), CP048638 (plasmid p6), CP048639 (plasmid p7), CP048640 (plasmid p8) [14361].
Production: Indole acetic acid, siderophores [14361].
NCBI Assembly ID: GCA_010669145 (GenBank), GCF_010669145 (RefSeq).
NCBI Taxonomy ID: 2267833.

Publication(s) using this strain [C20525].

Related information on delivery / use of the strain

Biosafety level	1	-
Terms and conditions	Not applicable	-
Export control ⁽¹⁾	No	-
Distribution control in Japan ⁽²⁾	Controlled
Genetically modified microorganism	No	-
Technical information	-	-
Additional information	-	-

(1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
(2) in complying with the Plant Protection Law of Japan

Delivery category

Domestic	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas	A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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