JCM Catalogue

Methanosarcina horonobensis Shimizu et al. 2011

Taxonomy in NCBI database: Archaea; Methanobacteriati; Methanobacteriota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae.

15518^T <-- S. Shimizu HB-1.
Accessioned in 2008.
=DSM 21571 =NBRC 102577.
Type strain [8806].
Medium: 230; Temperature: 37°C; Anaerobic.

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Source: Groundwater sampled from a subsurface Miocene formation located in Horonobe, Hokkaido, Japan [8806].
Biochemistry/Physiology: [8806].
G+C (mol%): 41.4 (HPLC) [8806].
DNA-DNA relatedness: [8806].
Phylogeny: 16S rRNA gene (AB288262) [8806].
Genome sequence: CP009516.
NCBI Assembly ID: GCA_000970285 (GenBank), GCF_000970285 (RefSeq).
BacDive ID: 7131.
NCBI Taxonomy ID: 418008.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD12610.

Publication(s) using this strain [C11151].

Related information on delivery / use of the strain

Biosafety level		1
Terms and conditions		Not applicable
Export control ⁽¹⁾		No
Distribution control in Japan ⁽²⁾		No
Genetically modified microorganism		No
Technical information		-
Additional information		-

(1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
(2) in complying with the Plant Protection Law of Japan

Delivery category

Domestic	B (Actively growing culture of a microbial strain that is not preserved as a dried culture / a microbial strain of which dried ampoules are not available)
Overseas	B (Actively growing culture of a microbial strain that is not preserved as a dried culture / a microbial strain of which dried ampoules are not available)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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