JCM Catalogue

Shewanella violacea Nogi et al. 1999

Taxonomy in NCBI database: Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae.

10179T <-- Y. Nogi DSS12.
Accessioned in 1997.
=CIP 106290 =LMG 19151.
Type strain [4548,6952].
Medium: 118;  Temperature: 4°C; Obligately psychrophilic.

Source: Marine sediment at a depth of 5,110 m, the Ryukyu Trench.
Biochemistry/Physiology: [4548].
Fatty acid: C16:1, C16:0, C20:5, i-C15:0 [4548].
Quinone: Q-8 (Q-7) [4548].
G+C (mol%): 47.0 (HPLC) [4548].
DNA-DNA relatedness: [4548].
Phylogeny: 16S rRNA gene (D21225) [4548].
Genome sequence: AP011177.
More information: Barophilic [4548].
NCBI Assembly ID: GCA_000091325 (GenBank), GCF_000091325 (RefSeq).
BacDive ID: 139656.
NCBI Taxonomy ID: 60217.

Publication(s) using this strain [A07018, B07144, A19094, A19148].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic F (Frozen culture with dry ice) or C (Actively growing culture on request)
Overseas F (Frozen culture with dry ice)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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