Strain data

Search for keyword=[genome sequence].
Lactobacillus delbrueckii subsp. bulgaricus
JCM number: 1002 <-- T. Mitsuoka S1-3 <-- ISL <-- P. A. Hansen Lb 14 <-- S. Orla-Jensen 14 ("Thermobacterium bulgaricum").
Source: Bulgarian yogurt [496].
Biochemistry/Physiology: [107,1883].
Cell wall: [010].
Serology: Group E [014].
G+C (mol%): 50.3 [015].
DNA-DNA relatedness: [583,1883].
Phylogeny: 16S rRNA gene (AB007908, LC063162).
Genome sequence: BBAN00000000, BJMY00000000, CR954253, JQAV00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12551.
 
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Publication(s) using this strain [A04010, A04059, A04168, A04172, A05049, A06222, A07006, A07011, A08194, A08195, A08221, A09214, A10062, B10126, A10239, A10266, A11003, A12061, A12347, A12441, A13005, A13120, A14450, B14491, A14492, A15140, A15540, A16536, A17536, A18143, A18169, A18528].
Patent publication(s) using this strain [JP2007-060940A, WO2007/013426, WO2007/032459, WO2007/119810, JP2007-112805A, JP2007-104995A, JP2008-074768A, JP2008-237198A, JP2008-247750A, JP2008-255084A, WO2008/068893, JP2008-061512A, JP2008-048652A, WO2008/096419, WO2008/136309, JP2008-061513A, JP2008-005834A, WO2009/069704, WO2009/069498, JP2009-183221A, JP2009-273450A, JP2009-100692A, JP2009-044983A, WO2009/041045, JP2010-252800A, JP2010-233577A, WO2011/102310, JP2011-139700A, JP2011-195513A, JP2012-205539A, WO2012/091081 , JP2012-207033A, WO/2012/067081, JP2013-005757A, WO/2013/099939, WO/2013/001862, JP2013-048636A, JP2013-063084A, JP2013-150626A, JP2013-150629A, JP2014-097081A, JP2014-094001A, JP2014-003929A, 2015-80434, 2015-86214, 2016-164144, 2016-073314, 2016-208996, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus delbrueckii subsp. delbrueckii
JCM number: 1012 <-- T. Mitsuoka S1-42 <-- ISL <-- ATCC 9649 <-- R. P. Tittsler 730 (strain Calvert) <-- M. Rogosa.
Source: Sour grain mash.
Biochemistry/Physiology: [1883].
Cell wall: [587].
G+C (mol%): 50.0 [013].
DNA-DNA relatedness: [1883].
Phylogeny: 16S rRNA (M58814) [2983], 16S rRNA gene (LC063163, X52654).
Genome sequence: AP019750, AZCR00000000, BALP00000000, BEWJ00000000, CP018615.
Assay: Alanine [586] and pyridoxal.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12485.
 
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Publication(s) using this strain [A04059, A04075, A04154, A07011, A09198, A10277, A11044, A12438, A13120, A15140, A16159].
Patent publication(s) using this strain [JP2008-074768A, JP2009-112214A, JP2010-239867A, JP2010-239868A, JP2011-103879A, WO2012/091081 , WO/2014/091988 , WO/2014/171478 , 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus gasseri
JCM number: 1025 <-- T. Mitsuoka S1-71 <-- G. Reuter VC (Lactobacillus acidophilus).
Source: Human intestine.
DNA typing: Ribotype [4925].
Genome sequence: BEXJ00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 14627.
 
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Publication(s) using this strain [A05053, A05197, A06217, A08221, A09184, A11330, A14450].
Patent publication(s) using this strain [JP2007-028942A, JP2007-244324A, JP2008-061512A, JP2008-061513A, JP2012-205539A, JP2013-226077A, JP2014-003929A, 2015-73483, 2015-86214].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aeromonas hydrophila subsp. hydrophila
JCM number: 1027 <-- Y. Kosako 68 <-- R. Sakazaki 68 <-- ATCC 7966 <-- M. L. Speck.
Biosafety level 2.
Source: Tin of milk with a fishy odor [545].
Biochemistry/Physiology: [544].
Numerical taxonomy: [155,544].
Serology: [1935].
Phylogeny: 16S rRNA gene (M59148) [10329], 16S rRNA gene (X74677) [10295], 16S rRNA gene (X60404, X87271), gyrB (AJ868394).
Other taxonomic data: Reference strain of O-serogroup 1 [1935].
Genome sequence: CP000462 [9545], MTGJ00000000, UFSL00000000.

Publication(s) using this strain [B04107, A09202, A11246, A11333, A12326, A12416, A16574, A17527, A18476].
Patent publication(s) using this strain [JP2007-289176A, JP2007-289180A, JP2007-289179A, JP2007-289178A, JP2007-289177A, JP2007-289175A, JP2007-289174A, JP2007-289173A, JP2007-289172A, JP2007-289171A, JP2007-289170A, JP2007-289169A, JP2008-118907A, JP2008-118904A, JP2012-44911A, US 20080113364 B2, JP2013-169190A, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus kitasatonis
JCM number: 1039 <-- T. Mitsuoka Ch-J-2-11.
Source: Chicken intestine [5597].
Biochemistry/Physiology: [5597].
DNA-DNA relatedness: [5597].
Phylogeny: 16S rRNA gene (AB107638, LC064885) [5710].
DNA typing: Ribotype [4925].
Other taxonomic data: Biotype X [107].
Genome sequence: AZFU00000000, BALU00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12488.
 
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Publication(s) using this strain [A06154].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aeromonas caviae
JCM number: 1043 <-- Y. Kosako 69 <-- M. Popoff 544 <-- ATCC 15467 <-- R. Schubert 256 <-- J. P. Crawford <-- H. Pivnick and L. R. Sabina.
Biosafety level 2.
Source: Used oil emulsion [166].
Biochemistry/Physiology: [166].
Numerical taxonomy: [544].
Phylogeny: 16S rRNA gene (FR870443, LC050172, X60409), gyrB (AM262164).
Genome sequence: CDBS00000000.
More information: Type strain of Aeromonas hydrophila subsp. anaerogenes [596].

Publication(s) using this strain [A12326].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Vibrio campbellii
JCM number: 1054 <-- R. Sakazaki <-- ATCC 25920 <-- P. Baumann 40.
Source: Seawater [10292].
Morphology: [1730,2026,10292,10293].
Biochemistry/Physiology: [1730,2026,10292].
G+C (mol%): 47.2 [10292].
Phylogeny: 16S rRNA gene (X56575) [10294,10329], 16S rRNA gene (X74692) [10295], 16S rRNA gene (AB680917, AF426824, LC050173).
Taxonomy: [2026].
Genome sequence: AMDG00000000, BAOF00000000 [10296].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus brevis
JCM number: 1059 <-- T. Mitsuoka S2-46 <-- P. A. Hansen Bb14 <-- S. Orla-Jensen 14 ("Betabacterium breve").
Source: Human feces [496,4037].
Cell wall: [010].
Serology: Group E [014].
G+C (mol%): 42.7 [013], 45.1 [2433], 45.0 (Tm) [4037].
DNA-DNA relatedness: [373,593,4037].
Phylogeny: 16S rRNA gene (LC062897, M58810, X61134) [2983].
DNA typing: Amplified rRNA gene restriction analysis [4956].
Genome sequence: AWVK00000000, AZCP00000000.
 
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Publication(s) using this strain [A04075, A04154, A04155, A04166, A04172, A04223, A05166, A06010, A06038, A07006, A07007, A07200, A07209, A08254, A08258, A08260, A08278, A09005, A09186, A09198, A09233, A10246, A11316, A12004, A12061, A12363, A12378, A12421, A12422, A12438, A16083, A16535, A17124, B17520, A18169, A18425].
Patent publication(s) using this strain [US 20070172549 A1, JP2007-195415A, JP2007-195414A, JP2007-189973A, JP2007-112805A, WO2008/149654, WO2008/130036, JP2008-211994A, JP2008-263971A, JP2009-112214A, WO2009/110646, JP2010-239868A, JP2010-239867A, JP2010-227055A, JP2010-209066A, JP2010-195711A, WO2010/110045, JP2010-124720A, JP2010-081935A, JP2010-029130A, JP2010-173984A, WO2012/091081 , JP2014-209921A, WO/2014/171478 , 2015-80435, 2015-61872, 2016-073314, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aeromonas caviae
JCM number: 1060 <-- Y. Kosako 71 <-- R. Sakazaki 71 <-- ATCC 15468 <-- R. Schubert <-- P. Liu <-- NRRL B-968 <-- M. Scherago ("Pseudomonas caviae").
Source: Epizootic of young guinea pigs [547].
Biochemistry/Physiology: [166].
Serology: [548].
Phylogeny: 16S rRNA gene (X60408, X74674).
Genome sequence: CDBK00000000, LS483441.

Publication(s) using this strain [A09202, A12289, A12326].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus reuteri
JCM number: 1081 <-- T. Mitsuoka T-51.
Source: Chicken intestine.
Other taxonomic data: Biotype IIb [107].
Genome sequence: NBBD00000000.

Publication(s) using this strain [A04076, A06194, A07218, A08236, A13529, A17033, A17535].
Patent publication(s) using this strain [JP2010-285421A, 2015-117220].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Buttiauxella agrestis
JCM number: 1090 <-- Y. Kosako 536 <-- R. Sakazaki 536 <-- F. Gavini F44.
Source: Surface water [475].
Biochemistry/Physiology: [475,477].
G+C (mol%): 49.0 (Tm) [475], 47.9 (Tm) [476].
DNA-DNA relatedness: [475].
Phylogeny: 16S rRNA gene (AJ233400, AJ293685).
Genome sequence: JMPI00000000.

Publication(s) using this strain [A11246, A14076].
Patent publication(s) using this strain [JP2009-261363A, WO2011/010740, US20160298181].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Weissella confusa
JCM number: 1093 <-- T. Mitsuoka S8-9 <-- DSM 20196 <-- ATCC 10881 (Leuconostoc mesenteroides) <-- C. S. McCleskey 548-D.
Source: Sugar cane [018,5135].
Biochemistry/Physiology: [3808].
Cell wall: Lys-Ala [021,3808].
G+C (mol%): 45 (Tm) [020], 46.6 (HPLC) [2433].
DNA-DNA relatedness: [3808,5135].
Phylogeny: 16S rRNA (M23036), 16S rRNA gene (AB023241, AB596944, LC063164), [2983,3808,5135].
Other taxonomic data: Whole-cell protein profile [5135].
Genome sequence: JQAY00000000.
More information: Cellular polyamines [6386].
 
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Publication(s) using this strain [A06038, A07006, A12417, A16119].
Patent publication(s) using this strain [JP2008-263971A, JP2010-081935A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus bifermentans
JCM number: 1094 <-- T. Mitsuoka S8-13 <-- DSM 20003 <-- T. E. Galesloot N2.
G+C (mol%): 45.0 [587].
Phylogeny: 16S rRNA (M58809) [2983], 16S rRNA gene (JN175330, LC063165).
Taxonomy: [1671].
Genome sequence: AZDA00000000.
 
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Publication(s) using this strain [B13332].
Patent publication(s) using this strain [JP2008-263971A, JP2010-081935A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus alimentarius
JCM number: 1095 <-- T. Mitsuoka S8-17 <-- DSM 20249 (Lactobacillus sp.) <-- G. Reuter R13.
Source: Marinated fish product [017].
Cell wall: [587].
G+C (mol%): 37 [587].
DNA-DNA relatedness: [012].
Phylogeny: 16S rRNA gene (LC063166, M58804) [2983], dnaK (JF411983) [10595].
Genome sequence: AZDQ00000000, BJZA00000000, CP018867, CP018868 (plasmid pLDW-11).
 
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Publication(s) using this strain [A05166, A06010, A07007, A07247, A08254, B12187, A12438].
Patent publication(s) using this strain [JP2007-189973A, WO2008/102745, WO2008/130036].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus curvatus
JCM number: 1096 <-- T. Mitsuoka S8-19 <-- DSM 20019 <-- I. G. Abo-Elnaga 1.
Source: Milk [016].
Biochemistry/Physiology: [4813].
Cell wall: [010].
G+C (mol%): 42.9 [587].
DNA-DNA relatedness: [012,4813].
Phylogeny: 16S rRNA gene (AM113777, LC063167).
Other taxonomic data: SDS-PAGE [4813].
Genome sequence: AZDL00000000, BBBQ00000000, BJOQ00000000, CP026116, CP026117 (plasmid pLDW-27).
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12578.
 
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Publication(s) using this strain [A06222, A07011, A07242, A09007, A10239, A11065, A12378, A12379, A18169].
Patent publication(s) using this strain [JP2007-112805A, JP2007-236344A, JP2008-239553A, WO2008/102745, WO2008/130036, 2017-012052].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus farciminis
JCM number: 1097 <-- T. Mitsuoka S8-22 <-- DSM 20184 <-- G. Reuter Rv4 na.
Source: Sausage [017].
Cell wall: [587].
G+C (mol%): 36.3 [587], 36.0 [2830].
DNA-DNA relatedness: [012,2830].
Phylogeny: 16S rRNA gene (LC063168, M58817), dnaK (JF411984) [10595].
Genome sequence: AEOT00000000, AZDR00000000, CP017702, PUFN00000000.
 
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Publication(s) using this strain [A09007, B12187, A13451].
Patent publication(s) using this strain [JP2007-189973A, WO2008/102745, JP2009-201459A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus sp.
JCM number: 1102 <-- T. Mitsuoka S8-40 <-- ATCC 27305 <-- H. Nonomura P-2 <-- E. Peynaud.
Source: Wine.
Genome sequence: ACGG00000000.
More information: 16S rRNA gene partial sequence of this strain has a high similarity (100%) with L. hilgardii.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus reuteri
JCM number: 1112 <-- DSM 20016 <-- G. Reuter F275.
Source: Intestine of adult [022].
G+C (mol%): 41 [587], 39.7 [2433].
DNA-DNA relatedness: [373].
Phylogeny: 16S rRNA gene (L23507, LC145550), [2983].
DNA typing: Amplified rRNA gene restriction analysis [4956].
Other taxonomic data: Restriction endonuclease analysis of chromosomal DNA [3527].
Genome sequence: AP007281 [8302], AZDD00000000, CP000705.
 
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Publication(s) using this strain [A04059, A04172, A06221, A07011, A08198, A08237, A08278, A09007, A09186, A09190, A09198, A10077, A10250, A11228, A11232, A11282, A11316, A12061, A12104, A12422, A12445, A13113, A13553, A14450, A15498, A15541, A16159, A16535, A17124, A17549, A18062, A18129, A18145, A18516].
Patent publication(s) using this strain [JP2007-112805A, WO2007/013438, JP2008-237198A, JP2008-074768A, JP2008-048652A, JP2008-199963A, WO2008/130036, JP2008-247750A, JP2009-242275A, JP2010-183858A, JP2010-209066A, JP2011-206057A, WO/2011/095526 , WO2012/091081 , JP2012-25699A, JP2012-205539A, JP2012-180289A, JP2012-147759A, WO2012/133827, WO/2013/137277, CN 102978290 A, JP2013-202029A, JP2014-003929A, WO/2015/174364, 2015-86214, 2016-073314, 2017-226635, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Weissella halotolerans
JCM number: 1114 <-- DSM 20190 <-- G. Reuter 61 ("Lactobacillus viridescens subsp. halotolerans").
Source: Sausage meat [017].
Biochemistry/Physiology: [3808].
Cell wall: Lys-Ala-Ser [587,3808].
G+C (mol%): 44.8 [587], 43.2 [2433].
DNA-DNA relatedness: [013,3808].
Phylogeny: 16S rRNA (M23037) [3808], 16S rRNA gene (AB022926, LC064886).
Genome sequence: ATUU00000000, JQAX00000000.
 
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Publication(s) using this strain [A06038, A06220, A07006].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus buchneri
JCM number: 1115 <-- ATCC 4005 <-- C. S. Pederson <-- R. S. Breed <-- F. L. Mickle ("Lactobacillus lycopersici").
Source: Tomato pulp [4037].
Cell wall: [010].
G+C (mol%): 44.8 [015], 45.0 (Tm) [2830,4037].
DNA-DNA relatedness: [593,594,4037].
Phylogeny: 16S rRNA (M58811), 16S rRNA gene (LC064887, X61139) [2983].
DNA typing: Amplified rRNA gene restriction analysis [4956].
Genome sequence: AZDM00000000, PUFP00000000.
 
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Publication(s) using this strain [A04154, A04172, A08260, A13449, A14450, A17001].
Patent publication(s) using this strain [JP2007-112805A, JP2008-263971A, JP2008-048652A, JP2010-227055A, JP2010-081935A, JP2010-017132A, JP2012-205539A, WO/2013/085009, 2015-86214, 2015-171341, 2017-118868].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus mali
JCM number: 1116 <-- ATCC 27053 <-- J. G. Carr J12.
Source: Apple juice from cider press [086].
G+C (mol%): 32.5 [1705], 36.9 [040].
Phylogeny: 16S rRNA gene (LC064888, M58824) [2983].
Taxonomy: [1705].
Genome sequence: AKKT00000000, AYYH00000000, BACP00000000.
 
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Publication(s) using this strain [A06222, A07011, A09007].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus fructivorans
JCM number: 1117 <-- ATCC 8288 <-- R. H. Vaughn <-- C. S. Pederson.
Cell wall: [010].
DNA-DNA relatedness: [1876].
Phylogeny: 16S rRNA (M58818), 16S rRNA gene (LC064889, X76330) [2983].
Genome sequence: AEQY00000000, AZDS00000000, QSLO00000000.
 
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Publication(s) using this strain [A04172, A07223, A08258, A09007, A10250, A18129].
Patent publication(s) using this strain [JP2011-000045A, JP2013-192485A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Atopobium minutum
JCM number: 1118 <-- ATCC 33267 <-- W. E. C. Moore VPI 9428 <-- D. W. Lambe, Jr.
Source: Perineal abscess [4477].
Biochemistry/Physiology: [4477].
Fatty acid: [4477].
Enzyme electrophoretic profile: [4477].
G+C (mol%): 46.6 (Tm) [587], 44 (Tm) [4477].
DNA-DNA relatedness: [4477].
Phylogeny: 16S rRNA gene (LC036309, X67148) [2983,3162].
Taxonomy: [3162].
Genome sequence: FNSH00000000, JQBO00000000.
 
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Publication(s) using this strain [A04007, A04172, B08036, A10013].
Patent publication(s) using this strain [WO2010/098103].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fructobacillus fructosus
JCM number: 1119 <-- ATCC 13162 <-- IFO 3516 <-- R. Kodama 353.
Source: Flowers [597].
Biochemistry/Physiology: [5371].
Fatty acid: [5371].
G+C (mol%): 43.4 (HPLC) [5371].
DNA-DNA relatedness: [5371].
Phylogeny: 16S rRNA gene (AF360737, LC062898, X61140) [2983,5371], recA (AB354946) [7453], rpoC (DQ335674).
Other taxonomic data: 16S-23S rRNA ITS (AB290446) [7453].
Taxonomy: [7453].
Genome sequence: AEOP00000000, BBXR00000000, JQBH00000000.
Assay: Nicotinamide and fructose [042].
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus helveticus
JCM number: 1120 <-- ATCC 15009 <-- P. A. Hansen Lh12 <-- S. Orla-Jensen 12 ("Thermobacterium helveticum").
Source: Emmental (Swiss) cheese.
Cell wall: [010].
Serology: Group A [014].
G+C (mol%): 39.3 (Tm) [013].
Phylogeny: 16S rRNA gene (LC062899, X61141) [2983].
DNA typing: AFLP [4724], RAPD-PCR [4724], ribotype [4925].
Other taxonomic data: SDS-PAGE [4724].
Genome sequence: ACLM00000000.
 
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Publication(s) using this strain [A04059, A04075, A05009, A06222, A07011, A11280, A12004, A12061, A12363, A14450, A14493, A14506, A15198, A16003, A17536, A18516].
Patent publication(s) using this strain [JP2008-245576A, JP2008-074768A, JP2008-005811A, JP2008-199905A, WO2008/130036, JP2009-112214A, JP2010-239867A, JP2010-239868A, JP2011-121923A, JP2011-177049A, JP2012-25699A, WO2012/091081 , WO/2012/063826, JP2012-12321A, JP2012-205539A, JP2013-192470A, JP2013-005757A, WO/2014/171478 , 2015-167474, 2015-47114, WO/2015/046407, 2015-86214, 2016-073314, 2016-208996, 2017-031102, 2017-031109, 2017-066047, 2017-066086, 2017-171616, 2017-201984, 2017-226635].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Eggerthia catenaformis
JCM number: 1121 <-- ATCC 25536 <-- L. Holdeman VPI 2933 <-- A. Prévot 1871.
Source: Pulmonary infection.
Phylogeny: 16S rRNA (M23729), 16S rRNA gene (AJ621549, LC145551).
Genome sequence: AUGJ00000000.
 
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Publication(s) using this strain [B08109, A11338].
Patent publication(s) using this strain [JP2008-212140A, JP2010-041940A, JP2014-000084A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus collinoides
JCM number: 1123 <-- ATCC 27612 <-- J. G. Carr C13a.
Source: Fermenting apple juice [087].
G+C (mol%): 46 [587].
Phylogeny: 16S rRNA gene (AB005893, LC062900).
Genome sequence: AYYR00000000, BBEQ00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12537.
 
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Publication(s) using this strain [B04084, A04154, A04172, A06010, A08254, A10149, B13281, B13387, B15270, B17320].
Patent publication(s) using this strain [JP2007-189973A, JP2008-263971A, JP2010-081935A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus amylotrophicus
JCM number: 1124 <-- NRRL B-4436 <-- L. K. Nakamura.
Source: Swine waste-corn fermentation [175].
G+C (mol%): 45.5 [175].
DNA-DNA relatedness: [1670].
Phylogeny: 16S rRNA gene (AM236149, LC064890) [6502].
Genome sequence: AZCV00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus amylophilus
JCM number: 1125 <-- NRRL B-4437 <-- L. K. Nakamura.
Source: Swine waste-corn fermentation [175].
G+C (mol%): 45.5 (Tm) [175].
DNA-DNA relatedness: [1670].
Phylogeny: 16S rRNA gene (LC145552, M58804) [2983].
Genome sequence: AYYS00000000, BBBR00000000, BJOP00000000, CP018888.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12579.
 
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Publication(s) using this strain [A06038, A06220].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus amylovorus
JCM number: 1126 <-- NRRL B-4540 <-- L. K. Nakamura <-- G. R. Hrubant.
Source: Cattle waste-corn fermentation [039].
Biochemistry/Physiology: [5147].
G+C (mol%): 40.4 (Tm) [039].
DNA-DNA relatedness: [039].
Phylogeny: 16S rRNA (M58805), 16S rRNA gene (AY944408, LC064891).
DNA typing: Amplified rRNA gene restriction analysis [4956], AFLP [4724], RAPD-PCR [4724], ribotype [4925].
Other taxonomic data: SDS-PAGE [4724].
Genome sequence: AZCM00000000, CP017706.
More information: Hemagglutination activity [3586]; Mutant (YF43) [4869]; Amylase activity [2908,5147].
Production: Lactic acid [5147].
 
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Publication(s) using this strain [A04059, A05009, A05039, A09007, A14450].
Patent publication(s) using this strain [WO2007/138993, JP2007-112805A, JP2008-024680A, JP2009-242431A, WO2010/038714, JP2012-25699A, JP2012-205539A, JP2014-003929A, JP2014-055195A, 2015-86214, 2017-226635].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus paragasseri
JCM number: 1130 <-- DSM 20077 <-- G. Reuter F164 (Lactobacillus acidophilus).
Source: Human feces [022].
Biochemistry/Physiology: [12323].
Cell wall: [585,12323].
Fatty acid: [12323].
G+C (mol%): 33.0 [584], 34.9 [12323].
DNA-DNA relatedness: [584,585].
Phylogeny: 16S rRNA gene (LC374362) [12323].
DNA typing: Amplified rRNA gene restriction analysis [4956], ribotype [4925].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [12323].
Genome sequence: BEXG00000000 [12323].
More information: Adherence to laminin [6388].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 14624.
 
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Publication(s) using this strain [A04081, A05039, A05053, A05059, A05197, A07184, A08236, A08247, A09013, A11330, A17536, A18329].
Patent publication(s) using this strain [WO2007/034581, JP2008-099632A, WO2012/091081 , JP2012-205539A, JP2013-226077A, JP2014-003929A, 2015-167474, 2015-73483, WO/2016/002757, 2016-073314, WO2016/080371, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus gasseri
JCM number: 1131 <-- DSM 20243 <-- F. Gasser AM63 (Lactobacillus acidophilus).
Source: Human intestine.
Cell wall: [585].
G+C (mol%): 34.0 [106].
DNA-DNA relatedness: [584,585].
Phylogeny: 16S rRNA (M58820, X61137) [2983], 16S rRNA gene (AF519171, LC064892).
DNA typing: Amplified rRNA gene restriction analysis [4956], AFLP [4724], RAPD-PCR [4724], ribotype [4925].
Other taxonomic data: SDS-PAGE [4724].
Genome sequence: BALQ00000000, CP000413, UGNT00000000, WBMG00000000.
More information: Isoflavonoid metabolism [6223]; Adherence to laminin [6388].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07468.
 
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Publication(s) using this strain [A04034, A04041, A04059, A04075, A04081, A04168, A04170, A04172, A05039, A05049, A05053, A05059, A05197, A06195, A06221, A06222, A06228, A06249, A07006, A07011, A07022, A07179, A08194, A08270, A08278, A08291, A09013, A09019, A09189, A09273, A10092, A10266, A11280, A11309, A11330, A12061, A12391, A12422, A13070, A13553, A14450, A14493, A14506, A15511, A15540, A15541, A15555, A15565, A16003, A16094, A16480, A16524, A16525, A16535, A17124, A17126, A17536, A17549, A17552, A18063, A18166, A18169, A18501].
Patent publication(s) using this strain [JP2007-028942A, JP2007-153741A, JP2007-112805A, JP2007-028920A, JP2007-189973A, WO2007/094342, WO2007/099997, JP2008-099632A, JP2008-271931A, JP2008-214253A, JP2008-024680A, JP2008-156299A, JP2008-048652A, JP2008-063289A, JP2008-099635A, JP2008-074768A, WO2008/114503, WO2008/130036, JP2009-183221A, JP2009-242431A, JP2009-044983A, JP2009-149523A, JP2009-112214A, JP2010-195711A, JP2010-239867A, JP2010-239868A, JP2010-252800A, WO2010/038714, JP2012-12321A, WO2012/023578, JP2012-25699A, JP2012-205539A, JP2012-180375A, JP2012-147759A, WO2012/091081 , WO/2013/085009, JP2013-226077A, JP2013-192470A, JP2014-003929A, JP2014-045743A, JP2014-055195A, WO/2014/171478 , 2015-47120, 2015-50993, 2015-86214, 2015-8672, 2015-167474, WO/2015/046407, 2016-073314, 2017-031102, 2017-066086, 2017-201984, 2017-171616, 2017-093441].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus acidophilus
JCM number: 1132 <-- ATCC 4356 <-- W. L. Kulp strain Scav (P. A. Hansen L917).
Source: Human feces.
Cell wall: [010,585].
G+C (mol%): 32 (Tm) [584].
DNA-DNA relatedness: [584,585].
Phylogeny: 16S rRNA (M58802) [2983], 16S rRNA gene (AY773947, HM162411, LC064893).
DNA typing: Amplified rRNA gene restriction analysis [4956], AFLP [4724], RAPD-PCR [4724], ribotype [4925].
Other taxonomic data: SDS-PAGE [4724].
Genome sequence: AZCS00000000, BALR00000000, BCVR00000000, CBLQ000000000, CP020620, JRUT00000000.
More information: Hemagglutination activity [3586]; S-layer protein [6620].
Production: Acidocin J1132 [4116].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07467.
 
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Publication(s) using this strain [A04034, A04059, A04074, A04075, A04172, A04184, A05009, A05039, A05053, A05166, A05197, A06008, A06222, A06228, A07006, A07007, A07011, A07209, A07241, A07242, A07247, A08019, A08278, A09005, A09186, A09237, A09251, A10239, A10269, A11316, A11321, A12004, A12048, A12422, A13158, A13543, A13553, A14493, A15541, A16083, A16535, A16542, A16558, A17124, A17536, A17549, A18166, A18169].
Patent publication(s) using this strain [JP2007-060919A, JP2007-182385A, JP2007-112805A, JP2007-037503A, JP2007-028920A, JP2007-001973A, WO2007/013426, WO2007/052356, JP2007-189973A, JP2008-024680A, JP2008-074768A, JP2008-005811A, JP2008-099632A, JP2008-271931A, WO2008/130036, JP2009-242275A, WO2009/116382, JP2009-112214A, JP2009-242431A, JP2010-173984A, JP2010-209066A, JP2010-239867A, JP2010-029117A, JP2010-239868A, JP2010-029130A, JP2010-183913A, JP2011-103879A, JP2011-148703A, WO2011/027829, JP2011-041499A, JP2012-144506A, JP2012-205539A, WO2012/091081 , JP2013-192470A, JP2013-005757A, WO/2014/171478 , JP2014-003929A, JP2014-045743A, JP2014-055195A, 2015-167474, 2015-164416, 2016-168011, 2016-073314, AU2015215750, 2017-066086, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus casei
JCM number: 1134 <-- ATCC 393 <-- G. J. Hucker 03 <-- S. Orla-Jensen 7 ("Streptobacterium casei").
Source: Cheese.
Cell wall: [010].
G+C (mol%): 49.0 [072].
DNA-DNA relatedness: [012].
Phylogeny: 16S rRNA (M23928), 16S rRNA gene (D16551, LC064894, X61135) [2983], recA (AJ286121) [5363].
DNA typing: Amplified rRNA gene restriction analysis [4956], ribotype [4925].
Other taxonomic data: Biotype II [107]; MALDI-TOF MS [9228].
Genome sequence: AP012544, AP012545 (plasmid pLBCZ-1), AP012546 (plasmid pLBCZ-2), AZCO00000000, BALS00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12311.
 
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Publication(s) using this strain [A04059, A04075, A04168, A04172, A04196, A04218, A05009, A05026, A05166, A06010, A06222, A07007, A07011, A07209, A07270, A08019, A08246, A08254, A09005, A09156, A09186, A09198, A09275, A10225, A10249, A11075, A11232, A11316, A11321, A12004, A12061, A12354, A12378, A12434, A12438, A14009, A14113, A14158, A15180, A15509, A16083, A16132, A16524, A16525, A16535, A17124, A17536, A18042, A18436, A18516].
Patent publication(s) using this strain [JP2007-112805A, WO2007/099997, WO2007/114378, JP2007-290998A, JP2007-236344A, JP2007-124973A, JP2007-037503A, JP2007-028920A, WO2008/130036, WO2008/136730, JP2008-263971A, JP2008-074768A, JP2009-084215A, JP2009-112214A, JP2009-183221A, WO2009/116382, US 20100086528 A1, JP2010-239868A, JP2010-239867A, JP2010-209066A, JP2010-081935A, JP2010-029130A, WO2010/119956, WO2010/110045, JP2010-227055A, WO2011/027829, JP2011-000045A, WO2012/091081 , JP2012-25699A, JP2012-147759A, JP2012-100655A, JP2013-005757A, WO/2014/171478 , WO/2015/174364, 2015-167474, US20160243174, 2016-013844, 2016-037451, 2016-073314, 2016-168011, 2016-208996, 2016-171814, 2017-201984, WO2017/159643].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus rhamnosus
JCM number: 1136 <-- ATCC 7469 <-- F. M. Strong (Lactobacillus casei).
Cell wall: [010].
G+C (mol%): 47.0 [053].
DNA-DNA relatedness: [012].
Phylogeny: 16S rRNA (M58815), 16S rRNA gene (D16552, LC145553) [2983], recA (AJ286117) [5363].
DNA typing: Ribotype [4925].
Other taxonomic data: MALDI-TOF MS [9228].
Genome sequence: PKQF00000000.
Assay: Folic acid [599], riboflavin [590], panthothenic, nicotinic and glutamic acids, pyridoxal and arginine [601], azothiopurine and 6-mercaptopurine.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12487.
 
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Publication(s) using this strain [A04059, A04154, A04172, A04226, A05019, A06220, A07223, A08246, A09198, A09228, A10247, A11280, A12061, A12354, A12392, A13127, A14450, A16159, A16535, A18133, A18143].
Patent publication(s) using this strain [JP2007-028920A, WO2007/013426, JP2007-284449A, JP2007-112805A, JP2007-084533A, JP2008-271955A, JP2008-048652A, WO2008/130036, JP2008-074768A, US 20090111103 B2, JP2010-173984A, JP2012-205539A, WO2012/091081 , JP2014-003929A, WO/2014/171478 , 2015-86214, CN106173246, 2016-208996, 2016-073314, 2016-037451, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus fermentum
JCM number: 1137 <-- ATCC 11739 <-- M. Rogosa 19LC3.
Source: Saliva.
Cell wall: [010].
G+C (mol%): 53.1 [015], 47.0 [2830].
DNA-DNA relatedness: [2830].
Phylogeny: 16S rRNA gene (AJ575812).
Taxonomy: [5700].
Genome sequence: JQAU00000000.
More information: Type strain of Lactobacillus cellobiosus [596].

Publication(s) using this strain [A10063, A11232].
Patent publication(s) using this strain [WO2007/023588, JP2010-173984A, WO/2014/108937 ].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kandleria vitulina
JCM number: 1143 <-- ATCC 27783 <-- M. E. Sharpe RL 2 <-- M. P. Bryant.
Source: Calf rumen [028].
Cell wall: [028].
G+C (mol%): 34.4 (Tm) [028].
Phylogeny: 16S rRNA (M23727), 16S rRNA gene (AB210825, LC064895) [7544].
Genome sequence: JNKN00000000, JQBL00000000.
 
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Publication(s) using this strain [A07006, B08109, A11338].
Patent publication(s) using this strain [JP2008-212140A, JP2009-100692A, JP2010-041940A, JP2014-000084A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus plantarum subsp. plantarum
JCM number: 1149 <-- ATCC 14917 <-- P. A. Hansen Lp 39 <-- R. Tech. Coll., Copenhagen <-- S. Orla-Jensen No. 39 ("Streptobacterium plantarum").
Source: Pickled cabbage.
Cell wall: [587].
Serology: Group D [014].
G+C (mol%): 45.0 (Tm) [013], 44.0 (Tm) [2830].
DNA-DNA relatedness: [012,2830].
Phylogeny: 5S rRNA [2494], 16S rRNA gene (D79210, LC064896, X52653) [2983].
Taxonomy: [2494].
Genome sequence: ACGZ00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12489.
 
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Publication(s) using this strain [A04059, A04075, A04150, A04154, A04172, A06010, A06221, A06222, A07011, A07242, A08246, A08258, A08260, A08271, A09025, A09186, A09198, A09228, A09237, A10063, A10230, A10249, A11065, A11238, A11255, A11316, A11321, A11363, A12048, A12070, A12090, A12306, A12363, A12378, A12379, A12393, A12417, A12438, A13122, A13157, A14166, A15609, A16012, A16083, A16160, A16480, A16504, A16534, A16535, A16558, A16577, A17010, A17045, A17062, A17124, A17501, A17516, A17533, A17563, A18139, A18143, A18145, A18166, A18169, A18436, A18484, A18528].
Patent publication(s) using this strain [JP2007-189973A, JP2007-269737A, JP2007-037503A, JP2007-028920A, JP2008-048652A, JP2008-245573A, JP2008-259498A, JP2008-013502A, JP2008-263971A, WO2008/130036, JP2009-195251A, JP2009-183221A, JP2009-153506A, JP2009-114112A, JP2009-112214A, WO2009/041415, JP2009-102270A, JP2009-114111A, JP2009-102276A, WO2009/110646, JP2010-029117A, JP2010-081935A, JP2010-195711A, JP2010-202557A, WO2010/110045, JP2010-209066A, JP2010-095465A, JP2010-227055A, JP2010-239867A, JP2010-239868A, JP2010-047504A, JP2011-000045A, JP2011-019419A, JP2011-195513A, WO2011/027829, JP2012-147759A, JP2012-184524A, JP2012-201599A, JP2012-213396A, JP2012-25699A, JP2012-88297A, WO2012/039261 , JP2012-127012A, JP2012-147748A, JP2012-100655A, WO2012/091081 , JP2013-233110A, JP2013-018971A, JP2013-236604A, WO/2014/171478 , 2015-80435, 2015-80434, WO/2015/004949, 2015-61872, 2015-221956, 2015-171341, CN104543602 A, CN104357353 A, CN104336416 A, 2016-171814, 2016-037451, 2016-073314, WO/2016/143745, US20160168544, US20160144041, 2017-226635, 2017-201984, 2017-113034].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus ruminis
JCM number: 1152 <-- ATCC 27780 <-- M. E. Sharpe RF1.
Source: Bovine rumen [028].
Cell wall: [028].
G+C (mol%): 43.8 [028].
Phylogeny: 16S rRNA (M58828) [2983], 16S rRNA gene (AB326354, LC064897).
Genome sequence: AYYL00000000, BCVU00000000, FOPI00000000, JHAJ00000000.
 
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Publication(s) using this strain [A09007, A10250, A12004, A18129, A18145].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus mali
JCM number: 1153 <-- ATCC 27304 <-- H. Nonomura 239 (Lactobacillus yamanashiensis).
Source: Wine must [1704].
DNA-DNA relatedness: [1705].
Taxonomy: [1705].
Genome sequence: JQAR00000000.
More information: Type strain of Lactobacillus yamanashiensis subsp. yamanashiensis [1704].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Carnobacterium maltaromaticum
JCM number: 1154 <-- ATCC 27865 <-- M. E. Morgan MX5.
Source: Raw milk with malt flavour [075].
Cell wall: [040].
G+C (mol%): 36.0 [075].
Phylogeny: 16S rRNA (M58825), 16S rRNA gene (LC065032, X54420) [2983].
Genome sequence: JQBG00000000.
More information: Causes malt-like aroma in milk [075].
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus hilgardii
JCM number: 1155 <-- ATCC 8290 <-- R. H. Vaughn 9.
Source: Wine.
Cell wall: [587].
G+C (mol%): 40.3 [220], 40.0 [2830].
Phylogeny: 16S rRNA (M58821) [2983], 16S rRNA gene (AB262962, AB429370, LC064898) [7663].
Genome sequence: ACGP00000000, AZDF00000000, PUFR00000000.
 
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Publication(s) using this strain [A07223, A08260].
Patent publication(s) using this strain [WO2012/091081 , 2016-073314, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus sakei subsp. sakei
JCM number: 1157 <-- ATCC 15521 <-- K. Kitahara strain T.S (=37).
Source: "Moto" (starter of sake).
Biochemistry/Physiology: [4813].
Cell wall: [010].
G+C (mol%): 42.2 [220].
DNA-DNA relatedness: [012].
Phylogeny: 16S rRNA (M58829) [2983], 16S rRNA gene (AM113784, AY204893, LC064899) [5808].
DNA typing: Amplified rRNA gene restriction analysis [4956].
Other taxonomic data: SDS-PAGE [4813].
Genome sequence: AZDN00000000, BALW00000000, PUFE00000000.
More information: Lactic acid racemase [066].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12490.
 
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Publication(s) using this strain [A04172, A04218, A05023, A05166, A05201, A05232, A06010, A06014, A06038, A06196, A06212, A06220, A06222, A06236, A07006, A07007, A07011, A07176, A07209, A07242, A08013, A08166, A08254, A08288, A09005, A09007, A09160, A09188, A09202, A09270, A10008, A10059, A10250, A10252, A10265, A11021, A11065, A11233, A11243, A11276, A11312, A12037, A12045, A12046, A12067, A12076, A12092, A12094, A12268, A12315, A12363, A12378, A12379, A12393, A12401, A12417, A13009, A13096, A13159, A13444, A13445, A13446, A14116, A14133, A14436, A15086, A15160, A15575, A15591, A15609, A16013, A16564, A17009, A17049, A17058, A17099, A17153, A17154, A17480, A17579, A18047, A18091, A18129, A18137, A18169, A18172, A18433, A18563].
Patent publication(s) using this strain [JP2007-189973A, JP2007-236344A, WO2008/130036, JP2008-048652A, WO2008/102745, JP2010-029130A, JP2012-67034A, WO2012/091081 , 2016-073314, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus paracasei subsp. paracasei
JCM number: 1161 <-- T. Mitsuoka S8-11 <-- DSM 20207 <-- I. G. Abo-Elnaga 41.
Source: Milk [016].
Cell wall: [587].
DNA-DNA relatedness: [012].
DNA typing: Ribotype [4925].
Other taxonomic data: MALDI-TOF MS [9228].
Genome sequence: JYBD00000000.
More information: Possesses lactic acid racemase [061].

Publication(s) using this strain [A04075, A12354].
Patent publication(s) using this strain [JP2007-112805A, JP2009-112214A, WO2012/091081 , 2016-073314, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus coryniformis subsp. coryniformis
JCM number: 1164 <-- T. Mitsuoka S8-10 <-- DSM 20001 <-- I. G. Abo-Elnaga 34.
Source: Silage [016].
Biochemistry/Physiology: [4599].
Cell wall: [010].
G+C (mol%): 46.4 [587].
DNA-DNA relatedness: [012].
Phylogeny: 16S rRNA (M58813) [2983,4599], 16S rRNA gene (LC064900).
Genome sequence: AELK00000000, AZCN00000000, CP017713.
 
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Publication(s) using this strain [A04154, A04172, A05166, A06010, A06038, A06220, A07006, A07007, A07209, A07247, A08254, A09005, A09007, A11044, A12378, B13332].
Patent publication(s) using this strain [JP2008-263971A, WO2008/102745, JP2010-029130A, JP2010-081935A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus coryniformis subsp. torquens
JCM number: 1166 <-- T. Mitsuoka S8-18 <-- DSM 20004 <-- I. G. Abo-Elnaga 30.
Source: Air of cowshed [016].
Biochemistry/Physiology: [4599].
Cell wall: [010].
G+C (mol%): 45.1 [587].
DNA-DNA relatedness: [012].
Phylogeny: 16S rRNA [4599], 16S rRNA gene (AJ575741, LC065033).
Genome sequence: AEOS00000000, AZDC00000000, CP017697, CP017698 (plasmid pLDW-4), CP017699 (plasmid pLDW-5), CP017700 (plasmid pLDW-6), CP017701 (plasmid pLDW-7).
 
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Publication(s) using this strain [A11025, A12378, B13332].
Patent publication(s) using this strain [WO2008/102745, JP2010-041982A, JP2010-279332A, 2017-189135].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Weissella minor
JCM number: 1168 <-- T. Mitsuoka S8-21 <-- DSM 20014 <-- I. G. Abo-Elnaga 3 ("Lactobacillus viridescens subsp. minor").
Source: Milking machine slime [026].
Biochemistry/Physiology: [3808].
Cell wall: Lys-Ser-Ala [010,027,121,3808].
G+C (mol%): 44.7 [587], 39.8 [2433].
DNA-DNA relatedness: [373,3808].
Phylogeny: 16S rRNA (M23039, X52569) [2983], 16S rRNA gene (AB022920, LC065034).
Genome sequence: JQCD00000000.
 
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Publication(s) using this strain [A06038, A06220, A07006].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus brevis
JCM number: 1170 <-- T. Mitsuoka S8-64 <-- ATCC 367 <-- E. B. Fred ("Lactobacillus pentoaceticus").
Source: Silage.
DNA typing: Amplified rRNA gene restriction analysis [4956].
Genome sequence: CP000416.
More information: Tyrosine decarboxylase activity [4648].
Assay: Cytosine and uracil [041].
 
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Publication(s) using this strain [A04075, A07006, A12363, A12368, A13158, A16558, A17045].
Patent publication(s) using this strain [JP2009-112214A, JP2011-000045A, JP2014-147367A, JP2014-147369A, JP2014-168441A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus fermentum
JCM number: 1173 <-- ATCC 14931 <-- P. A. Hansen Bl 28 <-- R. Tech. Coll., Copenhagen <-- S. Orla-Jensen 28 ("Betabacterium longum").
Source: Fermented beets.
Cell wall: [251].
Serology: Group F [014].
G+C (mol%): 53.4 (Tm) [013], 50.0 (Tm) [2433].
Phylogeny: 16S rRNA (M58819), 16S rRNA gene (JN175331, LC065036, X61142) [2983].
DNA typing: Amplified rRNA gene restriction analysis [4956].
Genome sequence: ACGI00000000.
More information: L-Serine dehydrotase [2907].
 
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Publication(s) using this strain [A04059, A04065, A04154, A04167, A05009, A06038, A06222, A07011, A07242, A08221, A08260, A09019, A09186, A11316, A12004, A12391, A12393, A12438, A14166, B14374, A14450, A14493, A17124, A17484, A18166, B18497].
Patent publication(s) using this strain [JP2007-189973A, JP2007-112805A, JP2008-061513A, JP2008-061512A, JP2008-187955A, WO2008/130036, JP2009-100692A, JP2010-209066A, JP2012-205539A, JP2012-25699A, JP2013-192470A, WO2013/062034, WO/2014/171478 , 2015-86214, 2015-164416, AU2015215750, 2016-208996, 2016-037451, 2017-226635].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Weissella viridescens
JCM number: 1174 <-- ATCC 12706 <-- J. B. Evans S38A.
Source: Cured meat products [1706].
Biochemistry/Physiology: [3808,4442].
Cell wall: Lys-Ala-Ser [027,3808].
Fatty acid: [4517].
Enzyme electrophoretic profile: [4442].
G+C (mol%): 42.7 [011], 43.0 [2830].
DNA-DNA relatedness: [373,593,2830,3808].
Phylogeny: 16S rRNA (M23040, X52568) [2983], 16S rRNA gene (AB023236, LC065037).
Genome sequence: CYXF00000000, JQBM00000000, UHIV00000000.
Assay: Thiamine [586,1708].
 
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Publication(s) using this strain [A12438].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactococcus lactis subsp. hordniae
JCM number: 1180 <-- T. Mitsuoka S8-66 <-- B. A. Latorre-Guzman HC-1.
Source: Leaf hopper (Hordnia circellata) [610].
Biochemistry/Physiology: [2185].
Cell wall: [2185].
Fatty acid: [2185].
G+C (mol%): 31.9 [610], 35.2 [1748].
DNA-DNA relatedness: [1748,2185].
Phylogeny: 16S rRNA gene (AB100804, LC065038).
Genome sequence: VXKC00000000.
More information: A multiplex PCR primer [8675].
 
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Publication(s) using this strain [A04043, A04195, A05201, A06010, B11108, A11280, A11363, A12338, A12378, A12379, A15575, A17126, B18351].
Patent publication(s) using this strain [JP2011-193844A, JP2011-217734A, WO2012/091081 , 2016-073314, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus crispatus
JCM number: 1185 <-- VPI 3199 <-- A. Prévot ("Eubacterium crispatum").
Source: Eye.
Biochemistry/Physiology: [612,1672].
G+C (mol%): 35.0 (Tm) [1672].
Phylogeny: 16S rRNA gene (LC065039, Y17362) [2983,4870].
DNA typing: Amplified rRNA gene restriction analysis [4956], AFLP [4724], RAPD-PCR [4724], ribotype [4925].
Other taxonomic data: SDS-PAGE [4724].
Genome sequence: AZCW00000000, BBBS00000000, NARH00000000.
More information: Hemagglutination activity [3586].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12580.
 
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Publication(s) using this strain [A04034, A04059, A05039, A09007, A09237, B10126, A10239, A14450, A18501, A18516].
Patent publication(s) using this strain [WO2007/138993, JP2007-112805A, JP2008-024680A, JP2009-242431A, JP2009-209132A, JP2009-100692A, JP2011-195513A, JP2012-205539A, JP2012-25699A, CN 102978290 A, JP2014-003929A, JP2014-055195A, 2015-86214, 2017-226635].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus sharpeae
JCM number: 1186 <-- DSM 20505 <-- N. Weiss 71.
Source: Municipal sewage [040].
Cell wall: [040].
G+C (mol%): 52.7 [040].
DNA-DNA relatedness: [040].
Phylogeny: 16S rRNA (M58831) [2983], 16S rRNA gene (LC065040).
Genome sequence: AYYO00000000, BBAC00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12538.
 
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Publication(s) using this strain [A04172, A09007].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus agilis
JCM number: 1187 <-- DSM 20509 <-- N. Weiss 262.
Source: Municipal sewage [040].
Cell wall: [040].
G+C (mol%): 43.6 [040], 41.0 [2830].
DNA-DNA relatedness: [040,2830].
Phylogeny: 16S rRNA (M58803) [2983], 16S rRNA gene (AB596945, LC065041).
Genome sequence: AYYP00000000.
 
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Publication(s) using this strain [A12004, A12369, A16092].
Patent publication(s) using this strain [JP2007-112805A, JP2012-144506A, JP2012-147759A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium animalis subsp. animalis
JCM number: 1190 <-- ATCC 25527 <-- T. Mitsuoka R 101-8 ("Bifidobacterium longum subsp. animalis" biotype a).
Source: Rat feces.
Biochemistry/Physiology: [3126].
Cell wall: Lys-Ser-Ala-Ala [2925,3126].
G+C (mol%): 60.1 [639], 61.4 (HPLC) [5742].
DNA-DNA relatedness: [070,3126,5742].
Phylogeny: 16S rRNA gene (LC065042, X70971) [5736,5742].
DNA typing: RFLP pattern [4423].
Other taxonomic data: Protein profile [1865,3126,5736].
Taxonomy: [3126].
Genome sequence: CP002567, JGYM00000000.
More information: Phase variations [3148].
 
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Publication(s) using this strain [A04079, A05048, A07240, A08230, A09019, A10294, A10298, A11043, A11224, A12405, A13116, A14117, A14441, A17103, A17511].
Patent publication(s) using this strain [WO2007/029773, JP2007-112805A, JP2007-189973A, JP2008-074768A, JP2009-125055A, JP2009-242430A, US 20100267094 A1, JP2012-180373A, JP2012-180288A, JP2014-055194A, US20140242643, 2015-96555].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium breve
JCM number: 1192 <-- ATCC 15700 <-- G. Reuter S1 (Variant a).
Source: Intestine of infant [110].
Biochemistry/Physiology: [3126,4424].
Cell wall: Lys-Gly [010,2925,3126].
Enzyme electrophoretic profile: [1865,3126,4425].
G+C (mol%): 58.4 (Tm) [181].
DNA-DNA relatedness: [023,3126].
Phylogeny: 16S rRNA (M58731) [1273,3126], 16S rRNA gene (AB006658, GU361815, LC071793).
DNA typing: RELP pattern [4423], rRNA gene restriction pattern [4597].
Taxonomy: [3126].
Genome sequence: ACCG00000000, AP012324 [10666], BBAO00000000, JDUD00000000, LR134348.
More information: Species-specific primer [4521].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12552.
 
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Publication(s) using this strain [A04071, A04075, A04079, A04152, A04184, A04196, A05048, A05174, A06015, A06016, A06033, A06196, A06239, A07023, A08019, A08190, A08201, A08221, A08304, A09019, A09026, A09198, A09275, A10085, A10101, A10251, A10294, A11008, A11050, A11235, A11236, A11237, A11252, A12039, A12287, A12293, A12441, A13116, A13170, A14435, A15097, A15506, A15541, A15565, A15571, A16131, A16501, A16542, A17037, A17103, A17151, A17492, A17549, A18008, A18063, A18166, A18569].
Patent publication(s) using this strain [JP2007-189914A, JP2007-320946A, JP2007-112805A, JP2007-001973A, WO2007/020884, WO2007/099997, WO2008/062555, JP2008-074768A, JP2008-120719A, JP2008-061513A, JP2008-061512A, JP2009-125055A, JP2009-173548A, JP2009-112214A, JP2009-242430A, WO2011/093465, JP2011-157335A, WO2011/093467, JP2012-180373A, WO2012/005240, WO2012/091081 , JP2013-042749A, JP2013-233110A, WO/2013/008881, JP2014-055194A, 2015-96555, 2015-198638, 2016-073314, 2016-028595, CN105671120, 2017-201984, 2017-057174, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium catenulatum subsp. catenulatum
JCM number: 1194 <-- ATCC 27539 <-- V. Scardovi B669.
Source: Human feces [071].
Biochemistry/Physiology: [3093,3126,4424].
Cell wall: Lys-Ala-Ala-Ser [2925,3126].
Enzyme electrophoretic profile: [3126,4425].
G+C (mol%): 54.7 [071].
DNA-DNA relatedness: [071,3126].
Phylogeny: 16S rRNA (M58732) [3126], 16S rRNA gene (AB437357, AF432082, GU361816, LC071794).
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597].
Other taxonomic data: Protein profile [1865]; Genome-to-genome distances [12227].
Taxonomy: [3126].
Genome sequence: ABXY00000000, AP012325 [10664], JDTP00000000, JGYT00000000.
More information: Species-specific primer [4521].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07424.
 
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Publication(s) using this strain [A04018, A04079, A04152, A05011, A05036, A06239, A07171, A07247, A08201, A09019, A09026, A09198, A10101, A10294, A11008, B11156, A12287, A12408, A12441, A13116, A13170, B14390, A15097, A15503, A15541, A16131, A17537, A17549, A18008, A18569].
Patent publication(s) using this strain [JP2007-091704A, JP2007-112805A, JP2007-189914A, JP2007-189973A, WO2007/099997, WO2007/020884, WO2008/062555, JP2009-173548A, JP2010-246523A, JP2012-180288A, JP2012-158561A, JP2013-042749A, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium dentium
JCM number: 1195 <-- ATCC 27534 <-- V. Scardovi B764.
Source: Dental caries [071].
Biochemistry/Physiology: [3093,3126].
Cell wall: Orn-Asp [2925,3126].
Enzyme electrophoretic profile: [3126].
G+C (mol%): 61.2 (Tm) [071].
DNA-DNA relatedness: [071,3126].
Phylogeny: 16S rRNA (M58735), 16S rRNA gene (D86183, GU361819, LC071795).
Other taxonomic data: Protein profile [1865].
Taxonomy: [3126].
Genome sequence: AP012326 [10656], FNSE00000000, JDUY00000000, LR134349.
 
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Publication(s) using this strain [A04018, A05011, A05171, A06239, B07183, B08048, A09019, A09198, B11156, A12287, A13116, A13170, B14390, A15097, A15183, A17103].
Patent publication(s) using this strain [JP2007-112805A, WO2007/099997, WO2009/116382, JP2010-246523A, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus fructivorans
JCM number: 1198 <-- ATCC 15435 <-- K. Kitahara H1 <-- T. Kaneko.
Source: Spoiled sake [129,613].
DNA-DNA relatedness: [1876].
Genome sequence: JQBI00000000.
More information: PCR detection [4429].
 
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Publication(s) using this strain [A04172, A06038, A07242].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus fructivorans
JCM number: 1199 <-- ATCC 15434 <-- K. Kitahara H42 <-- T. Kaneko.
Source: Spoiled sake [129,613].
Biochemistry/Physiology: [130,12581].
G+C (mol%): 35.4 (Tm) [130].
Phylogeny: 16S rRNA [2983], 16S rRNA gene (AJ621552, AM113780, LC311739, LC311740).
Other taxonomic data: Protein profile [4005]; Average nucleotide identity, genome-to-genome distances [12581].
Taxonomy: [12581].
Genome sequence: JQBN00000000.
More information: Type strain of Lactobacillus homohiochii [12581].
Assay: Mevalonic acid [129,613].
 
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Publication(s) using this strain [A04172, A06038, A07006].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium pseudocatenulatum
JCM number: 1200 <-- ATCC 27919 <-- V. Scardovi B1279.
Source: Feces of an infant [1297,3126].
Biochemistry/Physiology: [3093,3126,4424].
Cell wall: Lys-Ala-Ala-Ser [2925,3126].
Enzyme electrophoretic profile: [3126,4425].
G+C (mol%): 57.5 (Tm) [082].
DNA-DNA relatedness: [082,3126].
Phylogeny: 16S rRNA gene (partial) (M84785), 16S rRNA gene (D86187, GU361827, LC071796).
Other taxonomic data: Protein profile [1865].
Taxonomy: [3126].
Genome sequence: ABXX00000000, AP012330 [10662], JDUK00000000, JGZF00000000.
 
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Publication(s) using this strain [A04009, A04018, A04020, A04079, A04152, A04190, A05011, A05048, A06239, A07171, A07273, A08278, A09019, A09026, A09198, A10101, A10294, A11008, A11050, B11156, A11252, A12011, A12312, A12408, A12422, A13170, B14390, A15097, A15505, A15541, A17103, A17537, A17549, A18008, A18010, A18129, A18569].
Patent publication(s) using this strain [WO2007/099997, WO2007/029773, JP2007-091704A, JP2007-112805A, JP2007-189914A, JP2009-173548A, JP2012-180288A, JP2013-042749A, 2017-216979, 2017-000002].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium pseudolongum subsp. pseudolongum
JCM number: 1205 <-- ATCC 25526 <-- T. Mitsuoka PNC-2-9G (biotype a).
Source: Swine feces [109,3126].
Biochemistry/Physiology: [3126].
Cell wall: Orn-Ala-Ala-Ala [111,2925,3126].
Enzyme electrophoretic profile: [3126].
G+C (mol%): 59.5 (Tm) [023].
DNA-DNA relatedness: [023,3126].
Phylogeny: 16S rRNA (M58742), 16S rRNA gene (D86195, GU361829, LC071797).
DNA typing: RFLP pattern [4423].
Other taxonomic data: Protein profile [1865].
Taxonomy: [3126].
Genome sequence: JDTZ00000000, JGZH00000000.
 
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Publication(s) using this strain [A04190, A05174, A06239, A08278, A09026, A09198, A10101, A11008, A11236, A11237, A12422, A13170, A14435, A15097, A17078].
Patent publication(s) using this strain [JP2007-112805A, WO2007/020884, JP2011-000045A, 2017-000002, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium thermophilum
JCM number: 1207 <-- ATCC 25525 <-- T. Mitsuoka J18-P2-91.
Source: Swine feces [109,3126].
Biochemistry/Physiology: [3126].
Cell wall: Orn-Glu [111,2925,3126].
Enzyme electrophoretic profile: [3126].
DNA-DNA relatedness: [082,3126].
Phylogeny: 16S rRNA (U10151), 16S rRNA gene (AB437364, GU361834, JX986965, LC071798).
DNA typing: RFLP pattern [4423].
Other taxonomic data: Protein profile [1865].
Taxonomy: [3126].
Genome sequence: JDUB00000000, JGZV00000000.
More information: Significant genetic difference between B. thermophilum JCM 1207T and B. thermophilum DSM 20210T [12326].
 
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Publication(s) using this strain [A04018, A05011, A06239, A11008, A14085, A14086, A15164, A17132].
Patent publication(s) using this strain [JP2007-112805A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium boum
JCM number: 1211 <-- ATCC 27917 <-- V. Scardovi RU 917.
Source: Rumen of cattle [082].
Biochemistry/Physiology: [3126].
Cell wall: Lys-Ser-Glu [082,2925,3126].
Enzyme electrophoretic profile: [3126].
G+C (mol%): 60.0 (Tm) [082].
DNA-DNA relatedness: [082,3126].
Phylogeny: 16S rRNA gene (D86190, GU361814, LC071799).
Taxonomy: [3126].
Genome sequence: JDUH00000000, JGYQ00000000, JHWO00000000.
 
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Publication(s) using this strain [A04190, A06239, B08048].
Patent publication(s) using this strain [JP2007-112805A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium choerinum
JCM number: 1212 <-- ATCC 27686 <-- V. Scardovi <-- D. Matteuzzi SU 806.
Source: Pig feces.
Biochemistry/Physiology: [082].
Cell wall: Orn-Ser-Ala-Ala [082,2925].
G+C (mol%): 66.3 [082].
DNA-DNA relatedness: [082].
Phylogeny: 16S rRNA gene (D86186, GU361817, LC071800).
Genome sequence: AXVO00000000, JDUJ00000000, JGYU00000000.
 
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Publication(s) using this strain [A06239].
Patent publication(s) using this strain [JP2007-112805A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium cuniculi
JCM number: 1213 <-- ATCC 27916 <-- V. Scardovi RA93.
Source: Feces of a rabbit.
Biochemistry/Physiology: [082,3126].
Cell wall: Lys-Ser-Ala-Ala [2925,3126].
Enzyme electrophoretic profile: [3126].
G+C (mol%): 64.1 (Tm) [082].
DNA-DNA relatedness: [082,3126].
Phylogeny: 16S rRNA (M58734), 16S rRNA gene (AB438223, GU361818, JX986964, LC071801).
Other taxonomic data: Protein profile [1865].
Taxonomy: [3126].
Genome sequence: JDUL00000000, JGYV00000000.
 
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Publication(s) using this strain [A06239].
Patent publication(s) using this strain [JP2007-112805A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium pullorum subsp. pullorum
JCM number: 1214 <-- ATCC 27685 <-- V. Scardovi P145.
Source: Feces of a chicken.
Biochemistry/Physiology: [055].
G+C (mol%): 67.5 [055].
DNA-DNA relatedness: [055].
Phylogeny: 16S rRNA gene (D86196, GU361830, LC071802).
Other taxonomic data: Genome-to-genome distances [12227].
Genome sequence: JDUI00000000, JGZJ00000000..
 
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Publication(s) using this strain [A04018, A04190, A06239].
Patent publication(s) using this strain [JP2007-112805A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. longum
JCM number: 1217 <-- ATCC 15707 <-- G. Reuter E194b (Variant a).
Source: Intestine of adult [110,3126,6034].
Biochemistry/Physiology: [3093,3126,4424,5742,6034].
Cell wall: Orn-Ser-Ala-Thr-Ala [098,2925,3126].
Enzyme electrophoretic profile: [3126,4425].
G+C (mol%): 61.4 (Tm) [181], 61.3 (HPLC) [5742].
DNA-DNA relatedness: [023,053,3126,5742,6034].
Phylogeny: 16S rRNA (M58739), 16S rRNA gene (AB437359, GU361823, LC071818).
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597], ribotyping [6034], RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Taxonomy: [3126].
Genome sequence: AP010888 [8490], FNRW00000000, JGYZ00000000, LR134369.
More information: Species-specific primer [4521]; endo-α-N-acetylgalactosaminidase [6623].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07422.
 
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Publication(s) using this strain [A04015, A04071, A04079, A04152, A04168, A04172, A04184, A04196, A05008, A05036, A05048, A05174, A06033, A06239, A07171, A07193, A07210, A07256, A07273, A07284, A08201, A08207, A08225, A08270, A08278, A08304, A09019, A09026, A09198, A09210, A09233, A09240, A09258, A09276, A10101, A10249, A10294, A10313, A11050, A11225, A11235, A11236, A11237, A11252, A11259, A11297, A11362, A12039, A12078, A12287, A12295, A12415, A12422, A12441, A13116, A13170, A13440, A13454, A13457, A13488, A13546, A13553, A14001, A14009, A14079, A14425, A14435, A14451, A14454, A14526, A15097, A15494, A15565, A16074, A16093, A16094, A16131, A16467, A16560, A17103, A17156, B17520, A17566, A18008, A18010, A18039, A18152, A18524, A18564, A18569].
Patent publication(s) using this strain [JP2007-112805A, JP2007-189914A, JP2007-097517A, JP2007-091704A, JP2007-029107A, JP2007-001973A, WO2007/020884, WO2007/023588, WO2007/099997, JP2008-074768A, JP2008-120719A, WO2008/062555, JP2008-154495A, WO2008/114503, JP2009-027971A, JP2009-125055A, JP2009-173548A, JP2009-242430A, JP2009-183221A, WO2009/116382, WO2011/034181, JP2011-157335A, JP2011-219433A, WO2011/027875, JP2012-12321A, JP2012-180288A, JP2012-180373A, JP2012-158561A, WO2012/091081 , WO2012/005240, JP2013-027359, JP2013-233110A, JP2014-055194A, JP2014-064543A, JP2014-094001A, JP2014-168404A, JP2014-187886A, 2015-172040, 2015-198638, 2015-96555, 2016-073314, 2016-028595, WO/2016/208332, CN105671120, 2016-168011, 2017-000002, 2017-066087, 2017-079705, 2017-163881, 2017-175949, 2017-201984, 2017-216979, WO2017/159643].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium magnum
JCM number: 1218 <-- ATCC 27540 <-- V. Scardovi RA3.
Source: Rabbit feces [069,3126].
Biochemistry/Physiology: [3126].
Cell wall: Lys-Ala-Ala-Ser [111,2925,3126].
Enzyme electrophoretic profile: [3126].
G+C (mol%): 60.0 (Tm) [639].
DNA-DNA relatedness: [069,3126].
Phylogeny: 16S rRNA (M58740), 16S rRNA gene (D86193, GU361824, LC071819).
DNA typing: RFLP pattern [4423].
Other taxonomic data: Protein profile [1865].
Taxonomy: [3126].
Genome sequence: ATVE00000000, JDUG00000000, JGZB00000000.
 
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Publication(s) using this strain [A04018, A04190, A05011, A06239].
Patent publication(s) using this strain [JP2007-112805A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. infantis
JCM number: 1222 <-- ATCC 15697 <-- G. Reuter S12.
Source: Intestine of infant [110,3126,6034].
Biochemistry/Physiology: [3126,4424,5742,6034].
Cell wall: Orn-Ser-Ala-Thr [2925,3126].
Enzyme electrophoretic profile: [3126,4424].
G+C (mol%): 60.8 (Tm) [181].
DNA-DNA relatedness: [023,3126,6034].
Phylogeny: 16S rRNA (M58738), 16S rRNA gene (D86184, LC071820).
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597], ribotyping [6034], RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Taxonomy: [3126].
Genome sequence: AP010889 [8490], CP001095, JDTT00000000, LR134354.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07464.
 
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Publication(s) using this strain [A04018, A04075, A04079, A04196, A05011, A05171, A05174, A06239, A08190, A08304, A09019, A09026, A09198, A10101, A10251, A10294, A11008, A11050, A11074, A11225, A11235, A11236, A11237, A11252, A11297, A11362, A12039, A12062, A12287, A12293, A13116, A13170, A14113, A14435, A15097, A16131, A17126, A18008, A18010, A18039, A18063, A18166, A18411, A18532, A18564, A18569].
Patent publication(s) using this strain [JP2007-001973A, WO2007/099997, WO2007/023588, WO2007/020884, JP2007-029107A, JP2007-112805A, WO2008/062555, JP2009-125055A, JP2009-112214A, JP2009-242430A, JP2010-115126A, WO2011/027875, JP2012-180288A, JP2012-180373A, JP2013-119546A, JP2014-055194A, 2015-96555, 2015-198638, 2017-057174, 2017-031102, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Azospirillum brasilense
JCM number: 1224 <-- ATCC 29145 <-- J. Döbereiner Sp 7.
Source: Digitaria decumbens roots, Rio de Janeiro, Brazil [141].
Biochemistry/Physiology: [141].
G+C (mol%): 70 (Tm) [141], 67.5 (Tm) [1737].
DNA-DNA relatedness: [141].
Phylogeny: 16S rRNA gene (AY324110, GU256438).
Other taxonomic data: rRNA-DNA relatedness [1737].
Taxonomy: [141].
Genome sequence: JPIR00000000.
More information: Nitrate reduction and N2 fixing [1734,1735,1739]; Denitrification [1357,1358]; Regulation of aerobic growth [2279]; Cytochrome [2280].

Publication(s) using this strain [A06200, A09257, A10011, A15483].
Patent publication(s) using this strain [JP2012-170448A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus salivarius
JCM number: 1231 <-- ATCC 11741 <-- M. Rogosa HO66.
Source: Human saliva [600].
Cell wall: [010].
G+C (mol%): 34.7 [015].
Phylogeny: 16S rRNA gene (DQ901733, LC071821) [6487].
DNA typing: Amplified rRNA gene restriction analysis [4956].
Genome sequence: ACGT00000000.
 
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Publication(s) using this strain [A04059, A05166, A06010, A06038, A07011, B07120, A08280, A09019, A09186, A11316, A12393, A16535].
Patent publication(s) using this strain [JP2007-028920A, JP2007-112805A, WO2007/099997, WO2008/130036, JP2008-206516A, JP2008-212140A, JP2010-209066A, JP2010-173984A, JP2012-25699A, JP2014-000084A, 2017-226635].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Enterobacter cloacae subsp. cloacae
JCM number: 1232 <-- R. Sakazaki 206 <-- ATCC 13047 <-- NCDC 279-56 ("Aerobacter cloacae" Cloaca A).
Biosafety level 2.
Source: Spinal fluid.
Phylogeny: 16S rRNA gene (AJ251469).
Genome sequence: CP001918, CP001919 (plasmid pECL_A), CP001920 (plasmid pECL_B) [12592], CYTA00000000, JPPR00000000, MTFV00000000, UGJB00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12984.

Publication(s) using this strain [A04069, A05195, A09252, A12326, A12396, A13162, A13441, A15170, A17518, A17527, A18004, A18129, A18499].
Patent publication(s) using this strain [JP2007-124985A, WO2010/061915, WO2010/101237, WO2010/137594, JP2012-44911A, 2015-164416, 2015-38108, 2016-104726, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cronobacter sakazakii
JCM number: 1233 <-- Y. Kosako 216 <-- R. Sakazaki 216 <-- ATCC 29544 <-- J. J. Farmer CDC 4562-70 (Ct2(MR-)) <-- Tennessee State Health Dept., USA <-- Primary Hosp. Lab.
Source: Child's throat [002].
Biochemistry/Physiology: [002,7366].
G+C (mol%): 57.0 (Tm) [002].
DNA-DNA relatedness: [002,7366].
Phylogeny: 16S rRNA gene (AB004746, EF059843) [7366].
Genome sequence: BAWU00000000, JMRI00000000, UARI00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 09007.

Publication(s) using this strain [A07009, A08268, A11246, A12326, A16513, A18129, A18463, A18476].
Patent publication(s) using this strain [JP2009-261363A, JP2011-000045A, JP2012-44911A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pluralibacter gergoviae
JCM number: 1234 <-- Y. Kosako 221 <-- R. Sakazaki 221 <-- CDC 604-77 <-- CIP 76.1 <-- C. Richard 16-74.
Source: Urine [005].
Biochemistry/Physiology: [005].
G+C (mol%): 60.0 (Tm) [005].
DNA-DNA relatedness: [005].
Phylogeny: 16S rRNA gene (AB004748).
Taxonomy: [9820].
Genome sequence: BCZS00000000, UGTG00000000.

Publication(s) using this strain [A05013, A07010, A09263, A12289, A14162, A17527].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Klebsiella aerogenes
JCM number: 1235 <-- Y. Kosako 226 <-- R. Sakazaki 226 <-- ATCC 13048 <-- CDC 819-56.
Biosafety level 2.
Source: Sputum.
Biochemistry/Physiology: [642].
Numerical taxonomy: [642].
DNA-DNA relatedness: [641].
Phylogeny: 16S rRNA gene (AB004750, AJ251468).
Taxonomy: [11649].
Genome sequence: CP002824, LR134121, LR134123, LR134126, QVMZ00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 09010.

Publication(s) using this strain [A04069, A04072, A06040, A07173, A10063, A12091, A12326, A12396, A12424, A18129, A18179].
Patent publication(s) using this strain [WO2010/061915, WO2010/101237, WO2010/137594, JP2013-085503A, 2015-164416, 2015-38108, 2016-104726, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pantoea agglomerans
JCM number: 1236 <-- Y. Kosako 83002 <-- R. Sakazaki 236 <-- W. H. Ewing CDC 1461-67 <-- D. Graham <-- NCTC 9381 <-- M. Pereira strain Graham Price (=ICPB 3435).
Source: Knee laceration [007].
Biochemistry/Physiology: [007,3051].
DNA-DNA relatedness: [003,2151,3051].
Phylogeny: 16S rRNA gene (AF130953, AJ233423, AJ251466).
Taxonomy: [3051].
Genome sequence: BCZA00000000, UGSO00000000.
More information: Biogroup 1 [007].
 
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Publication(s) using this strain [A04168, A11246, A12366, A12406, A13501, A14076, A16098, A16103, A17114, A18071].
Patent publication(s) using this strain [WO2011/010740, JP2012-44911A, 2015-164416, AU2015215750, CN105506117, US20160298181].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lelliottia amnigena
JCM number: 1237 <-- Y. Kosako 246 <-- R. Sakazaki 246 <-- H. Leclerc CUETM 77-118.
Source: Soil [003].
Biochemistry/Physiology: [003].
G+C (mol%): 54.2 (Tm) [003].
DNA-DNA relatedness: [003].
Phylogeny: 16S rRNA gene (AB004749).
Taxonomy: [9820].
Genome sequence: LR134135, BCNN00000000, PDDA00000000.

Publication(s) using this strain [A08268, A12326, A12416, A14076, A18463].
Patent publication(s) using this strain [JP2009-261363A, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kluyvera intermedia
JCM number: 1238 <-- R. Sakazaki 256 <-- H. Leclerc CUETM 77-130 <-- F. Gavini E 86.
Source: Surface water.
Biochemistry/Physiology: [5894].
DNA-DNA relatedness: [5894].
Phylogeny: 16S rRNA gene (AB004747, AF310217) [5894].
Taxonomy: [5894].
Genome sequence: BCYS00000000, LR134138.

Publication(s) using this strain [A13501, A17527, A18463].
Patent publication(s) using this strain [JP2009-261363A, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Serratia marcescens subsp. marcescens
JCM number: 1239 <-- R. Sakazaki 296 <-- ATCC 13880 <-- M. Kocur BS303.
Biosafety level 2.
Source: Pond water [533].
Biochemistry/Physiology: [533].
G+C (mol%): 57.5 (Tm) [534], 60.9 (Tm) [542].
DNA-DNA relatedness: [008].
Phylogeny: 16S rRNA (M59160), 16S rRNA gene (AB594756, AJ233431).
Genome sequence: CP041233, CP041234 (plasmid pATCC), JMPQ00000000, JOVM00000000, RWJO00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 15966.

Publication(s) using this strain [A04032, A04049, A05031, A06219, A06234, A07228, A11246, A12326, B15089, A17527].
Patent publication(s) using this strain [JP2012-44911A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Serratia rubidaea
JCM number: 1240 <-- R. Sakazaki 306 <-- W. H. Ewing 2199-72.
Biosafety level 2.
Biochemistry/Physiology: [004,1219].
G+C (mol%): 53.6 (Tm) [004].
DNA-DNA relatedness: [004,1219].
Phylogeny: 16S rRNA gene (AB004751, AJ233436).
Genome sequence: BCZJ00000000, LJZP00000000.

Publication(s) using this strain [A06219, A08268, A18071].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Serratia ficaria
JCM number: 1241 <-- Y. Kosako 316 <-- R. Sakazaki 316 <-- ATCC 33105 <-- M. P. Starr <-- P. A. D. Grimont 4024.
Source: Smyrna figs [038].
Biochemistry/Physiology: [032,038].
G+C (mol%): 59.6±0.2 (Tm) [038].
DNA-DNA relatedness: [038].
Phylogeny: 16S rRNA gene (AB004745, AJ233428, AJ279054).
Genome sequence: BCTS00000000, LT906479.
More information: Pathogenicity [038].

Publication(s) using this strain [A04168, A04172, B12327].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Serratia fonticola
JCM number: 1242 <-- Y. Kosako 321 <-- R. Sakazaki 321 <-- ATCC 29844 <-- H. Leclerc.
Source: Spring water [008].
Biochemistry/Physiology: [008].
G+C (mol%): 51.5 (Tm) [008].
DNA-DNA relatedness: [008].
Phylogeny: 16S rRNA gene (AF286869, AJ233429).
Genome sequence: AVAH00000000, CABEEZ000000000, CP011254.

Publication(s) using this strain [A08268, A12366, A18463].
Patent publication(s) using this strain [WO2011/010740, US20160298181].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Serratia odorifera
JCM number: 1243 <-- Y. Kosako 331 <-- R. Sakazaki 331 <-- P. A. D. Grimont 1073.
Source: Sputum [001].
Biochemistry/Physiology: [001].
DNA-DNA relatedness: [001].
Phylogeny: 16S rRNA gene (AF286870, AJ233432).
Genome sequence: ADBY00000000, LR134117.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Serratia plymuthica
JCM number: 1244 <-- Y. Kosako 341 <-- R. Sakazaki 341 <-- P. A. D. Grimont 510 <-- CCM 640 <-- ATCC 183 <-- R. S. Breed K-7 ("Serratia plymouthensis") <-- Král Collection <-- Abel <-- B. Fischer.
Source: Water [037].
Biochemistry/Physiology: [001,037].
DNA-DNA relatedness: [001].
Phylogeny: 16S rRNA gene (AF286872, AJ233433).
Genome sequence: BCTU00000000, LS483469.
More information: Biotype C2c [001,037].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 09014.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Serratia liquefaciens
JCM number: 1245 <-- Y. Kosako 351 <-- R. Sakazaki 351 <-- W. H. Ewing <-- M. Grimes.
Biosafety level 2.
Biochemistry/Physiology: [004].
G+C (mol%): 53.9 (Tm) [542].
DNA-DNA relatedness: [008].
Phylogeny: 16S rRNA gene (AB004752, AJ306725).
Taxonomy: Nomenclature [006].
Genome sequence: CAADIY000000000, CP006252, CP006253 (plasmid).
 
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Publication(s) using this strain [A08268, A09253, A18463].
Patent publication(s) using this strain [2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus delbrueckii subsp. lactis
JCM number: 1248 <-- ATCC 12315 <-- P. A. Hansen L110 <-- A. Song-Kjaer (S. Orla-Jensen, "Thermobacterium lactis" No. 10).
Source: Emmental (Swiss) cheese [496].
Cell wall: [010].
DNA-DNA relatedness: [1883].
Phylogeny: 16S rRNA (M58823), [2983], 16S rRNA gene (AY050173, LC071822).
Genome sequence: AEXU00000000, AZDE00000000, CP022988, MRUN00000000.
Production: Lacticin [2903].
 
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Publication(s) using this strain [A04032, A04059, A05024, A06007, A06222, A07011, A10239, A11025, A11280, A12393, A13120, A14450, A15140, A18084, A18516].
Patent publication(s) using this strain [JP2007-112805A, JP2008-156299A, JP2008-048652A, JP2008-074768A, JP2008-237198A, JP2008-247750A, JP2010-279332A, JP2012-205539A, JP2012-25699A, 2015-86214, 2017-226635].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chromobacterium violaceum
JCM number: 1249 <-- R. Sakazaki <-- ATCC 12472 <-- P. H. A. Sneath strain MK <-- J. P. F. Whelan.
Biosafety level 2.
Source: Freshwater, Malaya.
Phylogeny: 16S rRNA gene (AB594767).
Genome sequence: AE016825, UFVI00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07721.

Publication(s) using this strain [A04168, A08299, A11254, A14456].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium adolescentis
JCM number: 1251 <-- DSM 20087 <-- V. Scardovi RU 424.
Source: Bovine rumen [059].
G+C (mol%): 60.6 [059].
DNA-DNA relatedness: [058].
DNA typing: Genome-wide tiling array [9039].
Other taxonomic data: Mannitol fermenter [639].
Genome sequence: JNKM00000000, LNKL00000000.

Publication(s) using this strain [A09201, A18008, A18166].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium animalis subsp. animalis
JCM number: 1253 <-- DSM 20105 <-- V. Scardovi P23.
Source: Chicken feces [070].
Biochemistry/Physiology: [3126,5742].
Cell wall: Murein type IVa, Orn(Lys)-Ser(Ala)-Ala-Ala [111,3126].
G+C (mol%): 60.1 (Tm) [070], 60.8 (HPLC) [5742].
DNA-DNA relatedness: [070,3126,5742].
Other taxonomic data: Protein profile [1865,3126].
Taxonomy: [3126].
Genome sequence: AWFL00000000.
More information: Phase variations [3148].

Publication(s) using this strain [A04079, A10010].
Patent publication(s) using this strain [WO2007/029773].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium bifidum
JCM number: 1254 <-- DSM 20082 <-- G. Reuter E319f (Variant a).
Source: Intestine of adult [110].
Biochemistry/Physiology: [3126].
Cell wall: Orn-Ser-Asp [010,2925,3126].
Enzyme electrophoretic profile: [3126].
G+C (mol%): 61.1 (Tm) [181].
DNA-DNA relatedness: [023,3126].
Phylogeny: 16S rRNA [1273].
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597].
Genome sequence: BBBT00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 08546.

Publication(s) using this strain [A04079, A05008, A05036, A05048, A05174, A06033, A07207, A07224, A07284, A08009, A08278, A09026, A09198, A09266, A10101, A11074, A11235, A11236, A11237, A11252, A11337, A12103, A12284, A12329, A12422, A13116, A13170, A13453, A14435, A15097, A15588, A16057, A16075, A17071, A17072, A17477, A17530, A18008, A18037, A18537, A18569].
Patent publication(s) using this strain [JP2007-189914A, JP2012-180288A, JP2013-201912A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium bifidum
JCM number: 1255 <-- DSM 20456 <-- T. Mitsuoka 4-127 <-- H. Tissier strain Ti.
Source: Feces of a breast-fed infant.
Biochemistry/Physiology: [3126,4424].
Cell wall: Orn-Ser-Asp [2925,3126].
Enzyme electrophoretic profile: [3126,4425].
DNA-DNA relatedness: [3126].
Phylogeny: 16S rRNA (M38018), 16S rRNA genes (rrnA, rrnB) (U25951, U25952) [8396], 16S rRNA gene (AB437356, GU361813, LC071804).
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597].
Genome sequence: AP012323 [10663], AWSW00000000, JGYO00000000, JDUM00000000.
More information: Species-specific primer [4521].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07979.
 
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Publication(s) using this strain [A04018, A04071, A04079, A04184, A04196, A05011, A06239, A07179, A08019, A08201, A08304, A09019, A09026, A09186, A09198, A09266, A10085, A10101, A10277, A10294, A11008, A11050, A11235, A11316, A12287, A13116, A13170, A13553, A15097, A15117, A15504, A15588, A17103, A17106, A18008, A18009, A18152, A18169, A18170].
Patent publication(s) using this strain [WO2007/020884, JP2007-001973A, JP2007-037503A, WO2007/023588, WO2007/052356, WO2007/086573, WO2008/062555, JP2008-074768A, JP2009-242430A, JP2009-173548A, JP2009-125055A, WO2009/116382, JP2010-209066A, JP2011-148703A, JP2011-219433A, JP2012-50428A, JP2012-180373A, JP2013-233110A, JP2013-042749A, JP2014-055194A, 2015-96555, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium thermophilum
JCM number: 1268 <-- DSM 20212 <-- V. Scardovi RU 326 ("Bifidobacterium ruminale").
Source: Bovine rumen [059].
Cell wall: [111].
G+C (mol%): 60.9 [059].
DNA-DNA relatedness: [023,058].
Genome sequence: JHWM00000000.

Publication(s) using this strain [A06239].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium longum subsp. suis
JCM number: 1269 <-- ATCC 27533 <-- D. Matteuzzi SU 859.
Source: Pig feces [122,3126,6034].
Biochemistry/Physiology: [3126,6034].
Cell wall: Orn-Ser-Ala-Thr-Ala [111,2925,3126].
Enzyme electrophoretic profile: [3126].
G+C (mol%): 63.3 (Tm) [122].
DNA-DNA relatedness: [023,058,3126,6034].
Phylogeny: 16S rRNA (M58743), 16S rRNA gene (AB437360, LC071805).
DNA typing: RFLP pattern [4423], ribotyping [6034], RAPD-PCR [6034].
Other taxonomic data: Protein profile [1865]; MALDI-TOF MS [9230].
Genome sequence: JDUC00000000, JGZA00000000.
 
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Publication(s) using this strain [A04018, A05011, A05209, A06239, A11315, A11362, B15603].
Patent publication(s) using this strain [JP2007-112805A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium breve
JCM number: 1273 <-- DSM 20091 <-- G. Reuter S50 ("Bifidobacterium parvulorum") (Variant a).
Source: Intestine of infant [110].
Biochemistry/Physiology: [4424].
Enzyme electrophoretic profile: [4425].
G+C (mol%): 59.4 (Tm) [181].
DNA-DNA relatedness: [023].
Phylogeny: 16S rRNA gene (X70972).
DNA typing: RFLP pattern [4423], rRNA gene restriction pattern [4597].
Genome sequence: CP006714.
 
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Publication(s) using this strain [A06033, A06239, A13121].
Patent publication(s) using this strain [JP2010-154805A, JP2013-233110A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium adolescentis
JCM number: 1275 <-- ATCC 15703 <-- G. Reuter E194a (Variant a).
Source: Intestine of adult [110].
Biochemistry/Physiology: [3093,3126,4424].
Cell wall: Lys(Orn)-Asp [010,3126].
Enzyme electrophoretic profile: [3126,4425].
G+C (mol%): 58.9 (Tm) [181].
DNA-DNA relatedness: [023,3126].
Phylogeny: 16S rRNA (M58729), 16S rRNA gene (AB437354, LC071806), hsp60 (AF210319) [5374].
DNA typing: RELP [4423], rRNA gene restriction pattern [4597], genome-wide tiling array [9039].
Other taxonomic data: Protein profile [1865].
Genome sequence: AP009256, UAQG00000000.
More information: Species-specific primer [4521].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07423.
 
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Publication(s) using this strain [A04015, A04018, A04079, A04152, A04168, A04196, A05011, A05036, A05048, A06033, A07171, B07183, A08019, A08201, A08244, A08278, A08304, A09019, A09026, A09198, A09201, A10090, A10101, A10294, A11008, A11225, A11236, A11237, A11252, A11297, A12287, A12408, A12422, A12441, A13116, A13170, A13553, A14435, A15097, A15541, A16131, A17103, A17549, A18008, A18010, A18152, A18169, A18418, A18569].
Patent publication(s) using this strain [WO2007/099997, WO2007/023588, WO2007/020884, WO2007/114378, JP2007-112805A, WO2008/062555, JP2008-074768A, JP2009-242430A, JP2009-125055A, JP2009-084215A, WO2009/028253, WO2011/027875, JP2012-180288A, WO2012/005240, JP2012-180373A, JP2013-042749A, JP2014-055194A, 2015-198638, 2015-96555, CN105671120, 2016-028595, WO2016/103699, 2017-216979].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Empedobacter brevis
JCM number: 1276 <-- NCTC 11099 <-- J. Würst CL 88/76.
Source: Bronchial secretion of a 70-year-old female patient with chronic bronchitis, Zurich, Switzerland [10297].
Morphology: [220,6814,10297].
Biochemistry/Physiology: [220,6814,10297].
G+C (mol%): 32.4 (Tm) [1730].
Phylogeny: 16S rRNA gene (D14022) [4101], 16S rRNA gene (AM177497) [10298], 16S rRNA gene (LC050176).
Taxonomy: [3614].
Genome sequence: ARNT00000000, BJXC00000000.

Publication(s) using this strain [B15045].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingobacterium spiritivorum
JCM number: 1277 <-- NCTC 11386 <-- CDC E7288 <-- Kansas Dept. Health Environ., USA <-- Univ. Kansas Med. Center, USA.
Source: Intrauterine specimens, KS, USA [191].
Biochemistry/Physiology: [191].
Numerical taxonomy: [506].
Fatty acid: [506].
G+C (mol%): 41.0 (Tm) [191].
DNA-DNA relatedness: [506].
Phylogeny: 16S rRNA (D14026), 16S rRNA gene (EF090267, M58778).
Genome sequence: ACHA00000000, UGYY00000000.

Publication(s) using this strain [A11246, A12256, B15012, B16400, A17221].
Patent publication(s) using this strain [JP2013-042749A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chryseobacterium balustinum
JCM number: 1278 <-- NCTC 11212 <-- V. Bonifas LA 724 <-- C. Tysset.
Source: Heart blood of fish.
Phylogeny: 16S rRNA gene (AY468447, LC050177).
Taxonomy: [3614].
Genome sequence: FUZE00000000, UAVR00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Vibrio fluvialis
JCM number: 1281 <-- NCTC 11327 <-- J. V. Lee VL 5125 <-- I. Hug 30.
Biosafety level 2.
Source: Human feces, Dacca, Bangladesh [4674].
Morphology: [2026,4674].
Biochemistry/Physiology: [2026,4674].
Serology: [1934].
G+C (mol%): 50.0 (Tm) [4674].
Phylogeny: 16S rRNA gene (X74703) [10295], 16S rRNA gene (LC050178, X76335).
Genome sequence: BCZR00000000, CP014034 (chromosome 1), CP014035 (chromosome 2), LMTE00000000, UHIP00000000.

Publication(s) using this strain [A18461].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grimontia hollisae
JCM number: 1283 <-- R. Sakazaki 82069 <-- ATCC 33564 <-- F. W. Hickman 75-80 <-- Maryland State Health Dept., USA <-- Anne Arundel Gen. Hosp., Annapolis, MD, USA.
Source: Stool, MD, USA [171].
Biochemistry/Physiology: [171].
G+C (mol%): 49.8 (Tm) [171].
DNA-DNA relatedness: [171].
Phylogeny: 16S rRNA gene (X56583) [10329,10368], 16S rRNA gene (AJ514909, X74707) [10368].
Other taxonomic data: Antibiotic susceptibility [171].
Taxonomy: [10368].
Genome sequence: CP014055 (chromosome 2), CP014056 (chromosome 1), ADAQ00000000.
More information: Causative agent of human diarrhea [171]; Special bacteriology group EF-3 [171].

Publication(s) using this strain [A11333].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium perfringens
JCM number: 1290 <-- ATCC 13124 <-- NCTC 8237 ("Clostridium welchii") <-- Wellcome Lab.; CN 1491.
This strain is not exported outside Japan.
Biosafety level 2.
Source: Bovine.
G+C (mol%): 24.0 (Tm) [1385].
DNA-DNA relatedness: [1385].
Phylogeny: 16S rRNA (M59103), 16S rRNA gene (AB573713).
Other taxonomic data: Protein profile [2652].
Genome sequence: CP000246.
Production: Phospholipase C, haemolysins and lethal toxins [1947].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 06606.
 
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Publication(s) using this strain [A04020, A04033, A04168, A04170, A04172, A04184, A05187, A06045, A07009, A09238, A10013, A10249, A10291, A11280, A12041, A12078, A12295, A12326, A12431, A13069, A14009, A16155, A17518, A18129].
Patent publication(s) using this strain [JP2007-289174A, JP2007-289178A, JP2007-289177A, JP2007-289176A, JP2007-289175A, JP2007-289180A, JP2007-289173A, JP2007-289172A, JP2007-289171A, JP2007-289170A, JP2007-289169A, JP2007-112805A, JP2007-001973A, JP2007-289179A, JP2008-118912A, JP2008-120719A, WO2010/098103, US 20080113364 B2, 2015-39320, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium clostridioforme
JCM number: 1291 <-- C. Kaneuchi <-- ATCC 25537 <-- L. V. Holdeman VPI 0316 <-- M. P. Bryant.
Source: Calf rumen.
G+C (mol%): 48.8 (Tm) [1380].
Phylogeny: 16S rRNA (M59089), 16S rRNA gene (LC036310).
Other taxonomic data: Protein profile [2652].
Genome sequence: FOOJ00000000, UAVW00000000.
 
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Publication(s) using this strain [A04020, A06045, A09256, A10277, A14528, A18129, A18139, A18508].
Patent publication(s) using this strain [WO2017/159643].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium paraputrificum
JCM number: 1293 <-- ATCC 25780 <-- L. DS. Smith VPI 1584.
G+C (mol%): 27.0 (Tm) [1385].
DNA-DNA relatedness: [1385].
Phylogeny: 16S rRNA gene (AB536771, X73445) [3374].
Other taxonomic data: Protein profile [2652].
Genome sequence: UAWH00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07510.
 
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Publication(s) using this strain [A04184, A06045, A10272, A12041, A15143, A18129].
Patent publication(s) using this strain [WO2007/099997].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridioides difficile
JCM number: 1296 <-- ATCC 9689 <-- F. E. Clark 90556-M6S (L. S. McClung 1780).
Biosafety level 2.
Source: Human feces [11120].
Biochemistry/Physiology: [11120].
Cell wall: meso-A2pm [11120].
Fatty acid: [1386,11120].
Phylogeny: 16S rRNA gene (AB075770, AB548672, X73450) [3374,11120].
Other taxonomic data: Protein profile [2652]; Antimicrobial susceptibility [1378].
Taxonomy: [11120].
Genome sequence: CP011968, CP011969 (plasmid) [10742].
More information: Metabolism of amino acids [1423].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12760.
 
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Publication(s) using this strain [A04184, A06033, A06045, A09019, A09238, A10249, A11028, A11076, A11280, A12071, A13500, A15197, A15555, A17481, A18129, A18166].
Patent publication(s) using this strain [JP2008-143793A, JP2008-199929A, JP2008-271931A, WO2012/132913, WO2014/061752, 2015-164416, 2016-169378, AU2015215750, 2017-019833].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium symbiosum
JCM number: 1297 <-- C. Kaneuchi <-- ATCC 14940 <-- R. E. Reeves ("Bacteroides symbiosus") <-- J. Shaffer 2 (M. Sebald strain LSU).
G+C (mol%): 46.1 (Tm) [1380].
Phylogeny: 16S rRNA (M59112), 16S rRNA gene (LC036311).
Other taxonomic data: Protein profile [2652].
Genome sequence: AWSU00000000, UFXK00000000.
More information: Used in cultivation of Entamoeba histolytica.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12809.
 
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Publication(s) using this strain [A10272, A12041, B12325, A15143, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium ramosum
JCM number: 1298 <-- ATCC 25582 <-- W. E. C. Moore VPI 0427 <-- A. R. Prévot 113-1 ("Ramibacterium ramosum").
G+C (mol%): 26.0 (Tm) [1375].
DNA-DNA relatedness: [1377].
Phylogeny: 16S rRNA (M23731) [4034], 16S rRNA gene (AB595128, X73440) [3374].
Other taxonomic data: Protein profile [2652].
Genome sequence: ABFX00000000.
 
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Publication(s) using this strain [A04184, A05187, A06045, A07179, A08278, A09019, A10272, A12041, A12422, A13551, A15143, A17473, A18129, A18166].
Patent publication(s) using this strain [WO2007/099997].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bifidobacterium indicum
JCM number: 1302 <-- ATCC 25912 <-- V. Scardovi C410.
Source: Hindgut of honeybee [120].
Biochemistry/Physiology: [3126].
Cell wall: [3126].
Enzyme electrophoretic profile: [3126].
DNA-DNA relatedness: [058,3126].
Phylogeny: 16S rRNA (M58737), 16S rRNA gene (D86188, GU361822, LC071807).
DNA typing: RFLP pattern [4423].
Other taxonomic data: Protein profile [1865].
Genome sequence: CP006018, JDUE00000000.
 
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Publication(s) using this strain [A06239, B08048].
Patent publication(s) using this strain [JP2007-112805A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium ammoniagenes
JCM number: 1305 <-- ATCC 6871 <-- NCTC 2398 <-- J. V. Cooke.
Source: Stool of infant [487].
Biochemistry/Physiology: [255,8039].
Cell wall: meso-A2pm direct [375]; N-acetyl Mur [276]; arabinogalactan [2883].
Fatty acid: [261,426,643,8039].
Quinone: MK-9(H2) [263,376].
Polar lipid: [264].
G+C (mol%): 54.1 (Tm) [125], 53.2 (Tm) [5453], 55.6 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (X82056, X84440) [3956,3961], rpoB (AY492243, FJ648511) [8039,10267].
Other taxonomic data: Mycolic acid [250,392,425]; Fatty acid synthase [1328]; Ribosomal protein [3945].
Taxonomy: [256,2529].
Genome sequence: ADNS00000000, CP009244.

Publication(s) using this strain [A08203, A11026, A16124].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium stationis
JCM number: 1306 <-- ATCC 6872 <-- NCTC 2399 <-- J. V. Cooke.
Source: Stool of infant [487].
Biochemistry/Physiology: [255,8039].
Cell wall: meso-A2pm direct; arabinogalactan [251]; N-acetyl Mur [256].
Fatty acid: [643].
Quinone: MK-9(H2) [263].
Polar lipid: [264].
G+C (mol%): 54.6 (Tm) [125].
DNA-DNA relatedness: [259].
Phylogeny: 16S rRNA gene (FJ648509), rpoB (FJ648510) [8039].
Taxonomy: [256,8039].
Genome sequence: CP014279.
More information: Snapping type cell division [252]; Cataloged as Corynebacterium ammoniagenes until Apr. 2010.

Publication(s) using this strain [A15086, A15609].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium glutamicum
JCM number: 1308 <-- K. Suzuki CNF 014 <-- AJ 1510 <-- ATCC 14067 <-- Ajinomoto Co., Inc., Japan; 2247.
Biochemistry/Physiology: [255,421].
Cell wall: meso-A2pm direct; arabinogalactan [251,375].
Fatty acid: [426,428,643].
Quinone: MK-9(H2) [376].
G+C (mol%): 56.8 (chemical) [423], 54.1 (Tm) [125].
DNA-DNA relatedness: [259].
DNA typing: hom gene RFLP [2940], rRNA gene RFLP [3055].
Other taxonomic data: Mycolic acid [392,425].
Taxonomy: [250,256,422,424,3055].
Genome sequence: AGQQ00000000 [9048], CP022614.
More information: Transducing phages [2255].
Production: L-Glutamic acid [427].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium diphtheriae
JCM number: 1310 <-- K. Suzuki CNF 017 <-- AJ 1414 <-- ATCC 11913 <-- J. M. Coffey 48255.
Biosafety level 2.
Source: Throat culture.
Biochemistry/Physiology: [255].
Cell wall: meso-A2pm [253]; N-acetyl Mur [277].
Fatty acid: [261,643].
Quinone: MK-8(H2) [263].
Polar lipid: [264].
G+C (mol%): 52.4 (Tm) [125].
DNA-DNA relatedness: [259].
Phylogeny: 16S rRNA gene (LC102487).
Other taxonomic data: Snapping type cell division [277]; Ribosomal protein [3947].
Taxonomy: [256].
Genome sequence: AUZN00000000 [10576].
More information: Avirulent strain; Fatty acid synthase [1328].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07892.

Publication(s) using this strain [A12431, A15197].
Patent publication(s) using this strain [2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rhodococcus hoagii
JCM number: 1311 <-- K. Suzuki CNF 002 <-- AJ 1402 <-- ATCC 6939 <-- NCTC 1621 <-- H. Magnusson.
Biosafety level 2.
Source: Lung abscess of foal.
Biochemistry/Physiology: [255,486,2843].
Numerical taxonomy: [2964,5342].
Cell wall: meso-A2pm direct [251]; N-glycolyl Mur [276]; sugars [3312].
Fatty acid: [261,426,643,3821,3925].
Quinone: MK-8(H2) [263,391,3821].
Polar lipid: [264].
G+C (mol%): 67.8 (Tm) [125], 67.2 (Tm) [5453], 69.7 (HPLC) [2843], 70.4 [490], 68.8 (genome sequence) [12227].
DNA-DNA relatedness: [259,490,2843,3821].
Phylogeny: 16S rRNA (M29574), 16S rRNA gene (AF490539, FJ468344, X80603, X80614) [3943,3951,5533].
Other taxonomic data: Mycolic acid [250,392,425,3821,4768]; Ribosomal protein [3947]; Genome-to-genome distances [12227].
Taxonomy: [256,486,9761]; Nomenclature [9929,9930,9932].
Genome sequence: APJC00000000, BCRL00000000, LWTX00000000, UGVJ00000000.
More information: Type strain of Rhodococcus equi [486,596]; Pili [2247].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 08038.

Publication(s) using this strain [A16082].
Patent publication(s) using this strain [JP2007-124985A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium flavescens
JCM number: 1317 <-- K. Suzuki CNF 011 <-- AJ 1415 <-- ATCC 10340 <-- R. N. Doetsch OJ 8 <-- S. Orla-Jensen.
Source: Cheese [496].
Biochemistry/Physiology: [255,485,493].
Cell wall: meso-A2pm direct [251,499]; N-acetyl Mur [276].
Fatty acid: [426,493,643].
Quinone: MK-8(H2), MK-9(H2) [263,376].
Polar lipid: [264].
G+C (mol%): 58.3 (Tm) [125], 58.6 (Tm) [493], 56.8 (Tm) [3569,5453], 59.9 (genome sequence) [12227].
DNA-DNA relatedness: [259,493].
Phylogeny: 16S rRNA gene (X82060, X84441) [3956,3961].
Other taxonomic data: Mycolic acid [250,392,425]; Ribosomal protein [3945,3947].
Taxonomy: [256,493].
Genome sequence: BJNB00000000, CP009246, VXKK00000000.
More information: Snapping type cell division [252].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium glutamicum
JCM number: 1318 <-- ATCC 13032 <-- Kyowa Hakko Kogyo Co., Ltd.; 534.
Source: Sewage.
Morphology: [430,431,433,434].
Biochemistry/Physiology: [255,421].
Cell wall: meso-A2pm [253]; N-acetyl Mur [276].
Fatty acid: [426,643].
Quinone: MK-9(H2) [263,391].
G+C (mol%): 56.8 (chemical) [423], 53.4 (Tm) [125], 54.6 (Tm) [3055], 54.3 (Tm) [5453], 55 (HPLC) [5439], 53.8 (genome sequence) [6251,12227].
DNA-DNA relatedness: [259].
Phylogeny: 16S rRNA gene (X80629, X82061, X84257, Z46753) [3951,3956,3961], 5S rRNA (M16175) [2499].
DNA typing: Restriction pattern of hom gene [2940], restriction pattern of rRNA gene [3055].
Other taxonomic data: Mycolic acid [392,425]; Ribosomal protein [3945,3947].
Taxonomy: [250,256,422,424].
Genome sequence: BA000036, BX927147 [6251], CP025533.
More information: Fatty acid synthetase [1328].
Production: L-Glutamic acid [429].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07494.

Publication(s) using this strain [A04007, A08203, A17587].
Patent publication(s) using this strain [JP2010-246561A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rhodococcus hoagii
JCM number: 1319 <-- K. Suzuki CNF 007 <-- AJ 1408 <-- ATCC 7005 <-- F. S. Orcutt.
Biosafety level 2.
Biochemistry/Physiology: [255].
Numerical taxonomy: [5342].
Cell wall: meso-A2pm [253]; N-glycolyl Mur [276].
Fatty acid: [643].
Quinone: MK-8(H2) [376].
G+C (mol%): 64.6 (Tm) [125], 68.8 (genome sequence) [12227].
DNA-DNA relatedness: [259].
Phylogeny: 16S rRNA gene (X82052) [3956].
Other taxonomic data: Mycolic acid [250,392,425]; Genome-to-genome distances [12227].
Taxonomy: [5341]; Nomenclature [9929,9930,9932].
Genome sequence: LRRF00000000.
More information: Pili [2247].

Patent publication(s) using this strain [JP2010-246561A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium renale
JCM number: 1322 <-- K. Suzuki CNF 009 <-- AJ 1411 <-- ATCC 10848 <-- E. V. Morse 5.
Biosafety level 2.
Source: Cattle with pyelonephritis, New York, USA.
Biochemistry/Physiology: [255].
Numerical taxonomy: [2245].
Cell wall: meso-A2pm [253].
Fatty acid: [643].
G+C (mol%): 57.4 (chemical) [488], 59.3 (Tm) [125].
DNA-DNA relatedness: [259,492].
Other taxonomic data: Ribosomal protein [3945].
Taxonomy: [256].
Genome sequence: LS483404.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium vitaeruminis
JCM number: 1323 <-- K. Suzuki CNF 008 <-- AJ 1525 <-- ATCC 10234 <-- M. A. Farrell.
Source: Rumen [494].
Cell wall: meso-A2pm direct [251,375]; arabinogalactan [2883].
Fatty acid: [491,643].
G+C (mol%): 64.4 (Tm) [125], 64.8 (Tm) [491].
DNA-DNA relatedness: [259,491].
Phylogeny: 16S rRNA gene (JX986971, X84680) [3961].
Other taxonomic data: Mycolic acid [250]; Ribosomal protein [3945,3947].
Taxonomy: [255,256,491].
Genome sequence: CP004353.

Patent publication(s) using this strain [JP2010-246561A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium sp.
JCM number: 1326 <-- K. Suzuki CNF 094 <-- IAM 12584 <-- NCIB 10087 <-- NCTC 9755 <-- J. H. Humphrey <-- G. F. Newton.
Fatty acid: [643,3922].
Quinone: MK-8(H2) [391].
G+C (mol%): 58.7 (Tm) [3569,5453].
Other taxonomic data: Mycolic acid [425,3922].
Genome sequence: UFYO00000000.
More information: Effects of growth temperature [484]; Fucidic acid sensitivity [495]; Cataloged as Corynebacterium xerosis until Feb. 2013.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Brevibacterium linens
JCM number: 1327 <-- ATCC 9172 <-- R. S. Breed 56b <-- C. Kelly <-- H. Weigmann.
Source: Dairy product, Kiel, Germany.
Morphology: [252].
Biochemistry/Physiology: [255,5912].
Cell wall: meso-A2pm direct [251,375]; N-acetyl Mur [276]; glycerol teichoic acid (Glc) [217,2883].
Fatty acid: [218,643].
Quinone: MK-8(H2) [263,376].
Polar lipid: [218,264].
G+C (mol%): 63.4 (Tm) [125].
DNA-DNA relatedness: [217,259,5912].
Phylogeny: 16S rRNA gene (X77451) [3571], 5S rRNA (M16205) [2499].
Other taxonomic data: Ribosomal protein [3945].
Taxonomy: [218,256].
Genome sequence: FXYY00000000, WBML00000000.

Publication(s) using this strain [A08136].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sinomonas atrocyanea
JCM number: 1329 <-- IAM 12339 <-- CCM 1645 <-- MRI.
Source: Air.
Biochemistry/Physiology: [255].
Cell wall: Type A3α (L-Lys-L-Ser-L-Ala2-3) [251,375,406]; neutral polysaccharide (Glc) [2883].
Fatty acid: [643,7587].
Quinone: MK-9(H2), MK-8(H2) (7:1) [7587].
Polar lipid: DPG, PG, PI, PME [7587].
G+C (mol%): 70.5 (Bd) [382], 69.5 (Tm) [125], 70.3 (HPLC) [7587], 71.4 (genome sequence) [12227].
DNA-DNA relatedness: [219,7586].
Phylogeny: 16S rRNA catalog [1210], 16S rRNA gene (EU697388, X80746) [3714,7587].
Other taxonomic data: Ribosomal protein [3945].
Taxonomy: [250,256,7587].
Genome sequence: BJMO00000000, CP014518, CP014519 (plasmid pSA01).
More information: Bending type cell division [252]; Produces blue pigment [225]; Cystite formation [4830].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paenarthrobacter aurescens
JCM number: 1330 <-- IAM 12340 <-- CCM 1649 <-- MRI <-- H. J. Conn.
Biochemistry/Physiology: [255].
Cell wall: Type A3α (L-Lys-L-Ala-L-Thr-L-Ala) [091,251,375]; neutral polysaccharide (Rha, Gal) [2883].
Fatty acid: a-C15:0, a-C17:0 [380,643,3011].
Quinone: MK-9(H2) [3011].
G+C (mol%): 59.1 (Bd) [382], 61.5 (Tm) [125], 66.2 (Tm) [380], 61.9 (HPLC) [3011].
DNA-DNA relatedness: [219].
Phylogeny: 16S rRNA gene (X83405), recA (AF214793).
Taxonomy: [250,256,11175].
Genome sequence: BJMD00000000.
More information: Cystite formation [4830].

Publication(s) using this strain [A16090].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Arthrobacter citreus
JCM number: 1331 <-- K. Suzuki CNF 021 <-- AJ 1423 <-- ATCC 11624 <-- WRRL.
Biochemistry/Physiology: [255,1080].
Cell wall: Type A3α (L-Lys-L-Thr-L-Ala2) [091,251,375]; N-acetyl Mur [276]; neutral polysaccharide (Gal) [2883].
Fatty acid: [380,643,1077].
Quinone: MK-9(H2) [263], MK-9(H2) MK-8(H2) [1077].
Polar lipid: [264,1077].
G+C (mol%): 65.1 (Tm) [382], 62.9 (Tm) [125], 68.0, 68.1 (Tm) [380], 64.9 (HPLC) [3011].
DNA-DNA relatedness: [219,259,1080].
Phylogeny: 16S rRNA catalog [1080], 16S rRNA gene (X80737) [3714].
Other taxonomic data: Ribosomal protein [3945].
Taxonomy: [256].
Genome sequence: VTFV00000000.
More information: Bending type cell division [252].
Assay: Subtilin [409].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Arthrobacter globiformis
JCM number: 1332 <-- K. Suzuki CNF 022 <-- AJ 1422 <-- ATCC 8010 <-- N. R. Smith 168 <-- H. J. Conn.
Biochemistry/Physiology: [255,1080].
Cell wall: Type A3α (L-Lys-L-Ala3) [251,375]; N-acetyl Mur [276]; neutral polysaccharide (Gal) [2883].
Fatty acid: [643].
Quinone: MK-9(H2) [263,376].
Polar lipid: [264].
G+C (mol%): 65.5 (Bd) [382], 62.0 (Tm) [125], 65.9 (HPLC) [2312], 66.2 (genome sequence) [12227].
DNA-DNA relatedness: [217,219,259,1080].
Phylogeny: 16S rRNA catalog [1080,1210], 16S rRNA (M23411), 16S rRNA gene (AB089841, X80736) [3714], 5S rRNA (M16173, X08002) [2495,2499], gyrB (AB014127).
Other taxonomic data: rRNA-DNA relatedness [217]; Protein profile [223]; Ribosomal protein [3945].
Taxonomy: [221,250,256].
Genome sequence: BAEG00000000.
More information: Bending type cell division [252]; Cystite formation [4830].

Publication(s) using this strain [B04026, A11026, A16090].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Glutamicibacter nicotianae
JCM number: 1333 <-- IAM 12342 <-- CCM 1648 <-- MRI <-- G. Giovannozzi-Sermanni.
Source: Air of tobacco warehouses [411].
Biochemistry/Physiology: [255,1080].
Cell wall: Type A4α (L-Lys-L-Ala-D-Glu) [251,375]; N-acetyl Mur [276]; glycerol teichoic acid [2883].
Fatty acid: [643,1077].
Quinone: MK-8 [MK-9] [263,1077].
Polar lipid: [1077].
G+C (mol%): 64.0 (Bd) [382], 60.2 (Tm) [125].
DNA-DNA relatedness: [219,1080].
Phylogeny: 16S rRNA catalog [1080], 16S rRNA gene (X80739) [3714].
Other taxonomic data: Ribosomal protein [3945].
Taxonomy: [250,256,1080,11175].
Genome sequence: BJNE00000000.
More information: Degrades nicotine [411].

Patent publication(s) using this strain [JP2009-142255A, JP2009-142256A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paenarthrobacter ureafaciens
JCM number: 1337 <-- K. Suzuki CNF 023 <-- AJ 1421 <-- ATCC 7562 <-- R. Dubos NC.
Source: Soil [414].
Biochemistry/Physiology: [255,1080,3011].
Cell wall: Type A3α (L-Lys-L-Ala-L-Thr-L-Ala) [091,251,375]; N-acetyl Mur [276]; neutral polysaccharide (Gal) [2883].
Fatty acid: a-C15:0, a-C17:0 [380,643].
Quinone: MK-9(H2) [263,376].
Polar lipid: [264].
G+C (mol%): 62.9 (Bd) [382], 61.7 (Tm) [125], 67.6, 65.7 (Tm) [380], 63.6 (HPLC) [3011].
DNA-DNA relatedness: [219,259,1080,3011].
Phylogeny: 16S rRNA catalog [1080], 16S rRNA gene (X80744) [3714].
Other taxonomic data: Ribosomal protein [3945].
Taxonomy: [250,256,1080,11175].
Genome sequence: SBHM00000000.
More information: Bending type cell division [252]; Degrades creatinine [415] and creatine [416]; Cystite formation [4830].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cellulomonas fimi
JCM number: 1341 <-- K. Suzuki CNF 025 <-- AJ 1571 <-- ATCC 484 <-- N. R. Smith NRS 133.
Source: Soil.
Biochemistry/Physiology: [255,266].
Cell wall: Type A4β (L-Orn-D-Glu) [227,251].
Fatty acid: [643].
Quinone: MK-9(H4) [263].
Polar lipid: [264].
Serology: [268].
G+C (mol%): 71.7 (Tm) [125], 74.7 (genome sequence) [12227].
DNA-DNA relatedness: [259,266].
Phylogeny: 16S rRNA gene (X79460, X83803) [3946].
Taxonomy: [250,256,266,4412].
Genome sequence: CP002666, LR134387.
More information: Glucose breakdown pathway [267]; Polar multitrichous flagella [1068]; Cellulase gene-cloning [1018,1019]; β-galactosidase [100].

Publication(s) using this strain [A04007, B13411, A18079, A18236].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Curtobacterium citreum
JCM number: 1345 <-- K. Suzuki CNF 026 <-- AJ 1469 <-- IAM 1614 <-- K. Komagata 2Y-10.
Source: Chinese paddy [232].
Biochemistry/Physiology: [255].
Cell wall: Type B2β ([L-Hsr] D-Glu-D-Orn) [251,375]; N-acetyl Mur [276]; neutral polysaccharide (Rha, Man) [2883].
Fatty acid: [236,643].
Quinone: MK-9 [236,263].
G+C (mol%): 70.5 (Tm) [125], 75.2 (Tm) [275].
DNA-DNA relatedness: [259,275].
Phylogeny: 16S rRNA gene (AM410690, X77436) [3571,9310], gyrB (AM410844), rpoB (AM410870), recA (AM410818), ppk (AM410792) [9310], 5S rRNA (M16171) [2499].
Other taxonomic data: rRNA-DNA relatedness [275].
Taxonomy: [231,250,256].
Genome sequence: VFMQ00000000.

Publication(s) using this strain [B07055].
Patent publication(s) using this strain [JP2009-142255A, JP2009-171864A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium saperdae
JCM number: 1352 <-- K. Suzuki CNF 058 <-- AJ 3126 <-- CCEB 366 <-- O. Lysenko 48-1-4.
Source: Saperda carcharias Linnaeus (Coleoptera), Mikulov, Czechoslovakia [249].
Biochemistry/Physiology: [249,255,3386].
Cell wall: Type B2β ([L-Hsr] D-Glu-Gly-D-Orn) [251,375,3386]; N-glycolyl Mur [276]; sugars (Gal, Glc) [3386].
Fatty acid: a-C15:0, a-C17:0, i-C16:0 [236,643,1078].
Quinone: MK-12 (MK-11) [236,1078,3386].
Polar lipid: DPG, PG, GL [236,1078,3386].
G+C (mol%): 68.5 (Tm) [125], 72.5 (Tm) [275], 69.1 (Tm) [1078].
DNA-DNA relatedness: [275,3386].
Phylogeny: 16S rRNA gene (AB004719, Y17236) [4412,5668].
Other taxonomic data: rRNA-DNA relatedness [275].
Taxonomy: [249,256,4412].
Genome sequence: VFOX00000000.

Patent publication(s) using this strain [JP2009-005677A, JP2010-280712A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium testaceum
JCM number: 1353 <-- K. Suzuki CNF 032 <-- AJ 1466 <-- IAM 1561 <-- K. Komagata Rp-3.
Source: Chinese paddy [232].
Biochemistry/Physiology: [3386].
Cell wall: Type B2β ([L-Hsr] D-Glu-Gly-D-Orn) [275,3386]; N-glycolyl Mur [276]; neutral polysaccharide (Rha) [2883], sugars (Rha, Man, Gal) [3386].
Fatty acid: a-C15:0, a-C17:0, i-C16:0 [236,643].
Quinone: MK-11, MK-12 [236], MK-11 [1078,3386].
Polar lipid: DPG, PG, GL [3386].
G+C (mol%): 72.7 (Tm) [275], 67.7 (Tm) [1078].
DNA-DNA relatedness: [275,3386].
Phylogeny: 16S rRNA gene (X77445) [3571], 5S rRNA (M16170) [2499].
Other taxonomic data: rRNA-DNA relatedness [275].
Taxonomy: [231,1078].
Genome sequence: BJML00000000.

Patent publication(s) using this strain [JP2009-142255A, JP2010-280712A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium trichothecenolyticum
JCM number: 1358 <-- K. Nakayama 114-2.
Source: Soil [278].
Biochemistry/Physiology: [3386].
Cell wall: Type B2β ([L-Hsr] D-Glu-Gly-D-Orn) [3386]; N-glycolyl Mur [3386]; sugars (Gal, Glc) [3386].
Fatty acid: [278].
Quinone: MK-12, MK-13 [3386].
Polar lipid: DPG, PG, GL [3386].
G+C (mol%): 70.1 (Tm) [278], 69.0 (HPLC) [3386], 70.2 (genome sequence) [12227].
DNA-DNA relatedness: [3386].
Phylogeny: 16S rRNA gene (AB004722, Y17240) [4412,5668].
Taxonomy: [4412].
Genome sequence: JYJA00000000.
More information: Assimilates mycotoxin T-2 [278,1091].

Publication(s) using this strain [B16367].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides simplex
JCM number: 1363 <-- K. Suzuki CNF 035 <-- AJ 1420 <-- ATCC 6946 <-- NCTC 4215 <-- H. L. Jensen.
Source: Soil [274].
Morphology: [252].
Biochemistry/Physiology: [255,381].
Cell wall: LL-A2pm, Gly [377,378]; LL-A2pm-Gly [251,375]; N-acetyl Mur [276]; glycerol teichoic acid (Glc) [2883].
Fatty acid: [643,1015,1074,1090], contains 2OH acids [238,243,1012,1013,1014,1016,1017].
Quinone: MK-8(H4) [263,376,1074,1090].
Polar lipid: [264,1074,1090].
G+C (mol%): 74.0 [382], 71.7 (Tm) [125], 74.4 (Tm) [380], 73.0 (Tm) [381], 72.9 (genome sequence) [12227].
DNA-DNA relatedness: [259,381].
Phylogeny: 16S rRNA catalog [273], 16S rRNA (M37693), 16S rRNA gene (AF005009, X53213, Z78212) [2561,4327,5213], 5S rRNA (M16174) [2499], RNase P RNA gene (AF110040) [4865].
Other taxonomic data: Protein profile [223]; 16S-23S rRNA ITS (AF017494) [4385]; Rapid identification primers [4387]; Polyamine [4623].
Taxonomy: [250,256,274,388,1090,2561].
Genome sequence: BJMC00000000, FOUK00000000.
More information: Oxidizes cholesterol [383,384,385,386,387]; Carbohydrate catabolism [183].

Publication(s) using this strain [B05227, A06238, A09118].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nocardioides jensenii
JCM number: 1364 <-- K. Suzuki CNF 091 <-- IAM 12581 <-- NCIB 9770 <-- C. W. Evans <-- H. L. Jensen.
Source: Soil [389].
Biochemistry/Physiology: [381].
Cell wall: LL-A2pm-Gly [251,375]; glycerol teichoic acid (Gal) [2883].
Fatty acid: [381,643].
Quinone: MK-8(H4) [381].
G+C (mol%): 68.8 (Tm) [381].
DNA-DNA relatedness: [381].
Phylogeny: 16S rRNA gene (AF005006, X53214, Z78210) [2561,4327,5213], RNase P RNA gene (AF110038) [4865].
Other taxonomic data: 16S-23S rRNA ITS (AF017491) [4385]; Rapid identification primers [4387]; Polyamine [4623].
Taxonomy: [2561].
Genome sequence: BCRJ00000000.
More information: Degrades dinitro-o-cresol herbicides [389].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12678.

Publication(s) using this strain [B05227].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leifsonia aquatica
JCM number: 1368 <-- K. Suzuki CNF 038 <-- AJ 1413 <-- ATCC 14665 <-- E. Leifson 150.
Source: Distilled water [1197].
Biochemistry/Physiology: [255,1197,4688,4757].
Cell wall: Type B2γ ([L-A2bu] D-Glu-D-A2bu) [251,375], D- & L-A2bu [4358]; Man, Fuc, Rha [4688].
Fatty acid: a-C17:0, a-C15:0, i-C16:0 [245,643].
Quinone: MK-11 [MK-10] [263,376,1205,4055].
Polar lipid: [264,1647].
G+C (mol%): 69.3 (Tm) [125], 73.2 (Tm) [275], 70.3 (HPLC) [4757].
DNA-DNA relatedness: [259,275,4688,4757].
Phylogeny: 16S rRNA gene & 16S-23S rRNA ITS & 23S rRNA gene (partial) (DQ232618), 16S rRNA gene (D45057, X77450) [3571,4055], 5S rRNA (M16169) [2499].
Other taxonomic data: rRNA-DNA relatedness [275].
Taxonomy: [256,4688,4757].
Genome sequence: AWVQ00000000.

Patent publication(s) using this strain [WO2007/026860].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clavibacter insidiosus
JCM number: 1369 <-- K. Suzuki CNF 101 <-- AJ 1409 <-- ATCC 10253 <-- W. H. Burkholder <-- E. D. Hansing.
Distribution to users in Japan is controlled by the Plant Protection Law.
Biochemistry/Physiology: [255].
Cell wall: Type B2γ ([L-A2bu] D-Glu-D-A2bu) [251,375].
G+C (mol%): 78.1 (Tm) [125], 76.1 (Tm) [275].
DNA-DNA relatedness: [275].
Phylogeny: 16S rRNA gene (AM410695, D45051) [4055,9310], gyrB (AM410849), rpoB (AM410875), recA (AM410823), ppk (AM410797) [9310].
Other taxonomic data: rRNA-DNA relatedness [275].
Taxonomy: [256].
Genome sequence: CP021038, CP021039 (plasmid pCI1).

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microbacterium lacticum
JCM number: 1379 <-- IAM 1640 <-- Shionogi & Co., Ltd. <-- ATCC 8180 <-- C. S. Pederson 5 <-- S. Orla-Jensen.
Biochemistry/Physiology: [255,485,3385].
Cell wall: Type B1α ([L-Lys] D-Glu(Hyg)-Gly-L-Lys) [251,499,1193]; N-glycolyl Mur [276]; polysaccharide (Rha, Gal) [2883,2885], sugars (Rha, Man, Gal) [3385].
Fatty acid: a-C15:0, a-C17:0, i-C16:0 [1076].
Quinone: MK-11 (MK-10, MK-12) [1076,3607].
Polar lipid: DPG, PG, dimannosyldiacylglycerol [1076].
G+C (mol%): 69.3 (Tm) [125], 74.9 (Tm) [275], 70.0 (Tm) [1076].
DNA-DNA relatedness: [3385].
Phylogeny: 16S rRNA gene (AB007415, X77441) [3571,3607,4413], 5S rRNA [3856].
Taxonomy: [256,485,496,4412].
Genome sequence: BJNA00000000, VFPS00000000.

Publication(s) using this strain [A04168, A07189, B08142, A09004].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium indolis
JCM number: 1380 <-- ATCC 25771 <-- L. DS. Smith VPI 4520 (NCIB 9731).
G+C (mol%): 44.0 (Tm) [1375].
Phylogeny: 16S rRNA gene (AB971794, Y18184).
Genome sequence: AZUI00000000, UYIM00000000.
More information: Fermentations of pectin, pectinic acid and galacturonic acid [1377].
 
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Publication(s) using this strain [A10272, A12041, A15143, A17473, A18129, A18166].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium cochlearium
JCM number: 1384 <-- ATCC 17794 <-- L. S. McClung 998 <-- S. E. Hartsell M-10.
Fatty acid: [1386].
G+C (mol%): 27.0 (Tm) [1375].
Phylogeny: 16S rRNA gene (LC007105).
Other taxonomic data: Protein profile [2652].
Genome sequence: UAWC00000000.
More information: Type strain of Clostridium lentoputrescens [596].
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paraclostridium bifermentans subsp. bifermentans
JCM number: 1386 <-- ATCC 638 <-- I. C. Hall 76.
Biosafety level 2.
Source: Soil.
Biochemistry/Physiology: [11038,12384].
G+C (mol%): 27.0 (Tm) [1375], 29.2 (HPLC), 28.3 (genome sequence) [11038].
DNA-DNA relatedness: [12384].
Phylogeny: 16S rRNA gene (AB618787, X73437) [3374].
Other taxonomic data: Protein profile [2652]; Average nucleotide identity [12384], MALDI-TOF-MS [12384].
Genome sequence: AVNC00000000, QZNC00000000, CM017267 (plasmid p14Cb).
 
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Publication(s) using this strain [A04020, A05187, A12041, A14457, A15143, A16184, A17473, A18129, A18166].
Patent publication(s) using this strain [JP2007-252333A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Eubacterium barkeri
JCM number: 1389 <-- ATCC 25849 <-- L. DS. Smith VPI 5359.
Source: Mud, the Potomac River, USA [2706].
Biochemistry/Physiology: [2706].
G+C (mol%): 45.0 (Tm) [1375].
Phylogeny: 16S rRNA (M23927) [3997,4034], 16S rRNA gene (LC036314).
Other taxonomic data: Protein profile [2652]; Polyamine [4622].
Genome sequence: FNOU00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 15807.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium beijerinckii
JCM number: 1390 <-- ATCC 25752 <-- L. DS. Smith VPI 5481.
Source: Soil.
Biochemistry/Physiology: [612,5118].
Cell wall: [1385].
G+C (mol%): 28.0 (Tm) [1385], 31.2 (HPLC) [5118].
DNA-DNA relatedness: [1385,5118].
Phylogeny: 16S rRNA gene (AB643462, X68179) [4033,5118].
Other taxonomic data: Protein profile [2652].
Genome sequence: LZZC00000000.
Production: Butanol [2651].

Publication(s) using this strain [A05187, A10315, A13107, A15170].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium butyricum
JCM number: 1391 <-- ATCC 19398 <-- NCTC 7423 <-- J. W. Howie strain Rowett.
This strain is not exported outside Japan.
Biosafety level 2.
Source: Intestine of swine.
Biochemistry/Physiology: [4516].
G+C (mol%): 28.0 (Tm) [639].
DNA-DNA relatedness: [1385].
Phylogeny: 16S rRNA (M59085), [1376,4033,4434], 16S rRNA gene (AB595129, AJ458420).
Other taxonomic data: Protein profile [2652]; Polyamine [4622]; SDS-PAGE [4516].
Taxonomy: [10984].
Genome sequence: AP019716, AP019717 (plasmid pCBU1), AP019718 (plasmid pCBU2), AP019719 (plasmid pCBU3), AQQF00000000 [10741].
More information: PFGE [4516].
Production: Butyricin 7423 [1382].
 
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Publication(s) using this strain [A05009, A06045, A09238, A10272, A12041, A12071, A15143, A15170, A17473, A17518, A18129, A18166].
Patent publication(s) using this strain [JP2007-112805A, CN102041274].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium celatum
JCM number: 1394 <-- ATCC 27791 <-- L. V. Holdeman VPI 8759-1 <-- A. H. W. Hauschild GD-1.
Source: Human feces [2649].
Phylogeny: 16S rRNA gene (AB971795, X77844).
Other taxonomic data: Protein profile [2652].
Genome sequence: AMEZ00000000.
Production: Urease [2649].
 
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Publication(s) using this strain [A04020, A08278, A09198, A09233, A12422].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Blautia coccoides
JCM number: 1395 <-- C. Kaneuchi CLC-1.
Source: Mouse feces [1381].
Biochemistry/Physiology: [7395].
G+C (mol%): 44.3 (Tm) [1381].
Phylogeny: 16S rRNA gene (AB571656, M59090).
Other taxonomic data: Protein profile [2652].
Genome sequence: SLWT00000000, UFVT00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07981.
 
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Publication(s) using this strain [A04020, A05009, A10089, A12078, A12312, A13538, A14009, A14451, A15128, A17492, A18008, B18060, A18065, A18129, A18166, A18519].
Patent publication(s) using this strain [CN 102978290 A, JP2013-119546A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium cochlearium
JCM number: 1396 <-- ATCC 17787 <-- L. S. McClung 1243.
Source: Soil.
Cell wall: [040].
Fatty acid: [1386].
G+C (mol%): 28.0 (Tm) [1375].
Phylogeny: 16S rRNA (M59093), 16S rRNA gene (AB538429).
Other taxonomic data: Protein profile [2652].
Genome sequence: LT906477.
 
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Publication(s) using this strain [A12071, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium cocleatum
JCM number: 1397 <-- C. Kaneuchi I 50 <-- K. Itoh 50.
Source: Cecum of mouse [1377].
G+C (mol%): 27.9 (Tm) [639].
DNA-DNA relatedness: [1377].
Phylogeny: 16S rRNA gene (AB910744, Y18188).
Other taxonomic data: Protein profile [2652].
Genome sequence: FOIN00000000, PHNQ00000000.
 
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Publication(s) using this strain [A10272, A12041, A15143, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium fallax
JCM number: 1398 <-- ATCC 19400 <-- Inst. Pasteur, Paris.
Source: Soil.
G+C (mol%): 26.0 (Tm) [1385].
Phylogeny: 16S rRNA (M59088), 16S rRNA gene (LC036315).
Other taxonomic data: Protein profile [2652].
Genome sequence: FQVM00000000, UAVV00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium felsineum
JCM number: 1399 <-- ATCC 17788 <-- L. S. McClung 541.
G+C (mol%): 26.0 (Tm) [1385].
Phylogeny: 16S rRNA gene (AF270501, AF270502, LC036316, X77851).
Other taxonomic data: Protein profile [2652].
Genome sequence: LZYT00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paeniclostridium ghonii
JCM number: 1400 <-- ATCC 25757 <-- L. DS. Smith VPI 4897.
Biochemistry/Physiology: [11038].
Fatty acid: [1386].
G+C (mol%): 27.0 (Tm) [1375], 28.5 (HPLC), 28.4 (genome sequence) [11038].
Phylogeny: 16S rRNA gene (AB542933, X73451) [3374].
Other taxonomic data: Protein profile [2652].

Publication(s) using this strain [A12041, A13538, A15143, A16184, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Terrisporobacter glycolicus
JCM number: 1401 <-- ATCC 14880 <-- L. W. Gaton.
Source: Mud, MD, USA.
Biochemistry/Physiology: [10047].
Fatty acid: [1386,10047].
G+C (mol%): 29.0 (Tm) [1375].
Phylogeny: 16S rRNA gene (LC036317, X76750) [3997].
Other taxonomic data: Protein profile [2652].
Taxonomy: [10047].
Genome sequence: ARES00000000, AUUB00000000.
 
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Publication(s) using this strain [A04020, A12041, A15143, B15356, A17481, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hathewaya histolytica
JCM number: 1403 <-- ATCC 19401 <-- NCTC 503 <-- M. Robertson <-- M. Weinberg.
Biosafety level 2.
Source: Gas gangrene.
Fatty acid: [1386].
Phylogeny: 16S rRNA (M59094), 16S rRNA gene (AB566416, HF558362).
Other taxonomic data: Protein profile [2652].
Taxonomy: [10984].
Genome sequence: LR590481.
More information: Metabolism of amino acid [1384,1423,1707]; Collagenase [6621].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 08942.
 
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Publication(s) using this strain [A05187, A11028, A11303].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Romboutsia lituseburensis
JCM number: 1404 <-- ATCC 25759 <-- L. DS. Smith VPI 2751.
Source: Mud.
Biochemistry/Physiology: [10047].
Fatty acid: [1386,10047].
G+C (mol%): 27.0 (Tm) [1375].
Phylogeny: 16S rRNA gene (M59107, LC007106).
Other taxonomic data: Protein profile [2652].
Taxonomy: [10047].
Genome sequence: FNGW00000000.
More information: Metabolism of amino acid [1384,1423,1707].
 
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Publication(s) using this strain [A12041, A15143, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium pasteurianum
JCM number: 1408 <-- ATCC 6013 <-- E. McCoy 5 <-- S. Winogradsky (L. S. McClung 2300).
G+C (mol%): 26.0 (Tm) [1385].
DNA-DNA relatedness: [1385].
Phylogeny: 16S rRNA (M23930), 16S rRNA gene (AB536773, FR870440) [4034].
Genome sequence: ANZB00000000, CP009267, CP009268, CP013018, JPGY00000000.
More information: Nutritional requirements [2570].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07509.

Publication(s) using this strain [A15550].
Patent publication(s) using this strain [JP2008-199929A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium scatologenes
JCM number: 1414 <-- ATCC 25775 <-- L. DS. Smith VPI 5393.
Fatty acid: [1386].
G+C (mol%): 27.0 (Tm) [1375].
Phylogeny: 16S rRNA gene (M59104, LC007109) [4845].
Other taxonomic data: Protein profile [2652].
Genome sequence: CP009933, JIDX00000000.
More information: Metabolism of amino acid [1384]; Acetogenic capacities [4845].
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium sphenoides
JCM number: 1415 <-- ATCC 19403 <-- NCTC 507 <-- M. Robertson strain Thorlby.
Source: Human gas gangrene.
G+C (mol%): 41.0 (Tm) [1375].
Phylogeny: 16S rRNA gene (LC053840, X73449) [3374].
Other taxonomic data: Protein profile [2652].
Genome sequence: BBDQ00000000, LT630003, UFXF00000000.
More information: Fermentation of citrate [1351]; Closely related to Desulfotomaculum guttoideum DSM 4024T (Y11568), with 99.9% (1470/1472 bp) 16S rRNA gene sequence similarity.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12527.
 
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Publication(s) using this strain [A04020, A06045, B12325, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium sporogenes
JCM number: 1416 <-- ATCC 3584 <-- J. C. Hall 388 <-- E. C. Peterson (L. S. McClung 2004).
Biosafety level 2.
Source: Soil.
Fatty acid: [1386].
G+C (mol%): 26.0 (Tm) [1375,1383].
Phylogeny: 16S rRNA (M59115), 16S rRNA gene (AB595130, X68189), [4434].
Other taxonomic data: Protein profile [2652].
Genome sequence: CP009225, CP011663, JFBQ00000000, MRAC00000000, UAWJ00000000.
More information: Metabolism of amino acid [1384,1423].
Application: Sporicidal test [1716].
 
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Publication(s) using this strain [A04020, A05187, A06010, A09238, A18129, A18480].
Patent publication(s) using this strain [JP2014-122213A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium acetobutylicum
JCM number: 1419 <-- IAM 19013 <-- S. Sugama <-- ATCC 824 <-- E. R. Weyer.
Biochemistry/Physiology: [5118].
G+C (mol%): 28.0 (Tm) [1385], 33.4 (HPLC) [5118].
DNA-DNA relatedness: [5118].
Phylogeny: 16S rRNA gene (AB595131, S46735, U16166, X78070) [4431,5118].
Other taxonomic data: Polyamine [4622].
Genome sequence: AE001437, AE001438 (plasmid pSOL1) [5028].
Production: Butanol and acetone.
Assay: p-Aminobenzoic acid.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 08097.
 
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Publication(s) using this strain [A07004, A11015, A11028].
Patent publication(s) using this strain [JP2007-000811A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Anaerocolumna aminovalerica
JCM number: 1421 <-- ATCC 13725 <-- J. K. Hardman and T. C. Stadtman.
Source: Sewage sludge, Washington, D.C., USA.
Biochemistry/Physiology: [11242].
Fatty acid: [11242].
G+C (mol%): 33 (Tm) [1375].
Phylogeny: 16S rRNA gene (AB627029, X73436).
Other taxonomic data: Protein profile [2652].
Genome sequence: FOWD00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ruminiclostridium cellobioparum subsp. cellobioparum
JCM number: 1422 <-- ATCC 15832 <-- L. V. Holdeman VIP 3359 <-- L. S. McClung and R. H. McBee <-- R. E. Hungate strain Cc.
Source: Bovine rumen [3153].
Biochemistry/Physiology: [3153].
Phylogeny: 16S rRNA gene (AB627030, X71856).
Other taxonomic data: Protein profile [2652].
Genome sequence: JHYD00000000 [12280].
More information: Cellulose-digesting bacterium [3153].
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Asaccharospora irregularis
JCM number: 1425 <-- ATCC 25756 <-- L. DS. Smith VPI 4428 <-- A. R. Prévot 6 VI.
Biochemistry/Physiology: [10047].
Fatty acid: [10047].
Phylogeny: 16S rRNA gene (AB971797, X73447) [3374].
Other taxonomic data: Protein profile [2652].
Taxonomy: [10047].
Genome sequence: FQWX00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium putrefaciens
JCM number: 1431 <-- ATCC 25786 <-- L. DS. Smith VPI 5395 <-- NCTC 9836 <-- E. M. Barnes.
Source: Spoiled ham [2536].
Cell wall: [1386].
Fatty acid: [1384].
Phylogeny: 16S rRNA gene (AB618788, AF127024, Y18177).
Other taxonomic data: Sporulation [2540]; Psychrophilic [2539].
Genome sequence: UFWZ00000000.
More information: Metabolism of amino acid [1423,1707].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium spiroforme
JCM number: 1432 <-- C. Kaneuchi <-- E. P. Cato VPI C28-23-1A.
Source: Human feces [1377].
G+C (mol%): 27.4 (Tm) [639].
DNA-DNA relatedness: [1377].
Phylogeny: 16S rRNA gene (AB818948, X73441) [3374].
Other taxonomic data: Protein profile [2652].
Genome sequence: ABIK00000000.
 
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Publication(s) using this strain [A08278, A09198, A10272, A12041, A12422, A15589, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acetoanaerobium sticklandii
JCM number: 1433 <-- ATCC 12662 <-- A. C. Schwartz <-- T. C. Stadtman.
Source: Mud water.
Fatty acid: [1386].
G+C (mol%): 31 [1375].
Phylogeny: 16S rRNA (M26494) [4035], 16S rRNA gene (LC053841).
Other taxonomic data: Protein profile [2652].
Genome sequence: FP565809.
More information: Metabolism of amino acid [1384,1423,1707]; Closely related to Acetoanaerobium noterae (GU562448), with 99.9% (1369/1371 bp) 16S rRNA gene sequence similarity.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pichia membranifaciens
JCM number: 1442 <-- CBS 107 <-- N. H. Claussen.
Phylogeny: D1/D2 region of 26S rRNA gene (U75725) [4520], 18S rRNA gene (EF550365), elongation factor 1 gene (AY497634, EF552451).
Other taxonomic data: Lysis by β-1,3-glucanase and reducing agent [1066].
Genome sequence: AEHA00000000.
More information: Type strain of Saccharomyces membranifaciens.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Vanrija humicola
JCM number: 1457 <-- CBS 571 <-- W. Daszewska.
Source: Soil [364].
G+C (mol%): 62.7 [209].
Phylogeny: 18S rRNA gene (AB032637) [4714,4953], D1/D2 region of 26S rRNA gene (AF189836) [4751], elongation factor 1 gene (FJ534861).
Other taxonomic data: Component sugars [363]; Restriction mapping of rRNA gene [2657]; ITS & 5.8S rRNA gene (AB035572) [4953].
Genome sequence: BCJF00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13876.
 
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Publication(s) using this strain [A11040, A15572, A18562].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Apiotrichum porosum
JCM number: 1458 <-- CBS 2040 <-- W. Stautz.
Source: Exudate of Taxus baccata [5048].
Locality: Hamburg, Germany [5048].
Morphology: [5048].
Biochemistry/Physiology: [5048].
Phylogeny: D1/D2 region of 26S rRNA gene (AF189833) [4751,5048], 18S rRNA gene (AB051045).
Taxonomy: [5048].
Genome sequence: BCJG00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13785.
 
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Publication(s) using this strain [A14206, A15572, A18562].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cutaneotrichosporon cutaneum
JCM number: 1462 <-- CBS 2466 <-- E. A. R. F. Baudet.
Biosafety level 2.
Quinone: Q-10 [1132,2688].
G+C (mol%): 54.5 [451], 55 [451], 63.5 [1281], 61.3 (HPLC) [3790].
DNA-DNA relatedness: [3147,3790].
Phylogeny: D1/D2 region of 26S rRNA gene (AF075483) [4751], 18S rRNA gene (AB001753) [4347], ITS (AF444325), D1/D2 region of 26S rRNA gene [3147].
Other taxonomic data: Component sugars [363]; Septal pore ultrastructure [3147].
Genome sequence: BCKU00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13905.

Publication(s) using this strain [A15572, A18562].
Patent publication(s) using this strain [JP2008-278857A, JP2008-278870A, JP2008-278858A, JP2008-278859A, JP2008-278860A, JP2008-278861A, JP2008-278862A, JP2008-278863A, JP2008-278864A, JP2008-278866A, JP2008-278867A, JP2008-278868A, JP2008-278856A, JP2008-278855A, JP2008-278854A, JP2008-278843A, JP2008-278844A, JP2008-278845A, JP2008-278846A, JP2008-278847A, JP2008-278848A, JP2008-278849A, JP2008-278850A, JP2008-278851A, JP2008-278852A, JP2008-278869A, US 20110086358 B2, US 20120172257 A1, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cryobacterium psychrophilum
JCM number: 1463 <-- IAM 12024 <-- K. Inoue and K. Komagata 27-O-b.
Source: Soil in Showa Station, Antarctica [257].
Biochemistry/Physiology: [258,4203].
Cell wall: A2bu, Glu, Ala, Gly; Fuc, Rha [4203], L-A2bu [4358].
Fatty acid: a-C15:0, a-C15:1, i-C15:0 [4203].
Quinone: MK-10 [4203].
Polar lipid: DPG, PG, GL [4203].
G+C (mol%): 66.5 (Tm) [258], 65 (HPLC) [4203].
Phylogeny: 16S rRNA gene (AJ544063, AM410676, D45058) [4203,9310], gyrB (AM410830), rpoB (AM410856), recA (AM410804), ppk (AM410778) [9310].
Genome sequence: SODI00000000, SOHQ00000000.
More information: Psychrophile [257].

Publication(s) using this strain [A05006, B08113].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Micrococcus luteus
JCM number: 1464 <-- IAM 1056 <-- IFO 3333 <-- ATCC 4698 <-- A. Fleming.
Biochemistry/Physiology: [5187].
Cell wall: [251,1202,5102].
Fatty acid: [1204,5187].
Quinone: MK-8, MK-7 [1181], MK-8 in PBY medium and MK-8 + MK-8(H2) in GPS medium [3008].
Polar lipid: [265].
G+C (mol%): 72 (Tm) [1258], 72.8 (Tm) [1201], 73.3 (Tm) [1184,1187], 73.6 (HPLC) [2312], 73.0 (genome sequence) [12227].
DNA-DNA relatedness: [1203,5187].
Phylogeny: 16S rRNA gene (AF542073, AJ536198) [5484], 5S rRNA (K02682) [2253], 23S rRNA gene (X06484).
Other taxonomic data: Transformation [1208,2304]; Cytochrome pattern [1213]; Ribosomal protein [3945].
Taxonomy: [1202,1211,5187].
Genome sequence: CABC00000000, CP001628, CP035298, LS483396, QVMY00000000.

Publication(s) using this strain [B04107, A04168, A04170, A04172, A05184, A07173, A12077, A12346, A15537, A16124, A17131, A17518].
Patent publication(s) using this strain [JP2008-194057A, JP2012-44911A, JP2013-169190A, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bacillus subtilis subsp. subtilis
JCM number: 1465 <-- IAM 12118 <-- ATCC 6051 <-- H. J. Conn strain Marburg.
Biochemistry/Physiology: [1699,2949].
Numerical taxonomy: [2949].
Cell wall: meso-A2pm [251].
G+C (mol%): 43.0 [1703], 45.6 (UV) [2313], 42.9 (Tm) 43.1 (Bd) [2214].
DNA-DNA relatedness: [1694,1699].
Phylogeny: 16S rRNA gene (AB042061, AB598736, X60646) [3047].
Other taxonomic data: Pyrolysis [1699]; Ribosomal protein [3945,3947]; Whole-cell protein profile [4155].
Taxonomy: [5156].
Genome sequence: AP019714, AP019715 (plasmid pBSU1), CM000488 [11564], CP015375, CP034484, CP034485 (plasmid).
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 08099.

Publication(s) using this strain [A04032, A04050, B04113, A04218, A05027, A05166, A05182, A05201, A05231, A05232, A06010, A06038, A06212, A06220, A07007, A07155, A07209, A07252, A08254, A09005, A09183, A09188, A09254, A09284, A10008, A10225, A10227, A10252, A10272, A11021, A11312, A12003, A12045, A12067, A12096, A12286, A12342, A12367, A12416, A12417, A13046, A13495, A13503, A14087, A14116, A15004, A15086, A15139, A15170, A15463, A15575, A15609, A17002, A17067, A17068, A17153, A17581, A17582, A18246, A18565].
Patent publication(s) using this strain [JP2008-174487A, JP2008-074865A, JP2008-173441A, JP2010-178728A, JP2010-029130A, JP2010-148468A, WO2010/079763, JP2010-207094A, JP2011-012027A, JP2011-037786A, JP2011-046651A, WO2011/142300, JP2012-88297A, JP2012-246588A, JP2012-184524A, JP2012-127012A, WO2012/039261 , JP2013-014554A, JP2013-018971A, WO/2014/013795 , WO/2014/010291 , JP2014-018714A, 2015-221956, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Blautia producta
JCM number: 1471 <-- T. Mitsuoka S10-45.
Source: Human feces.
Biochemistry/Physiology: [7395].
Phylogeny: 16S rRNA gene (AB600998, D14144, X94966) [3530].
Genome sequence: ARET00000000, AUUC00000000.
More information: Celluar polyamines [6386].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07421.
 
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Publication(s) using this strain [A05178, A08278, A09007, A09198, A10272, A11238, A11280, A12041, A12295, A12391, A12422, A15117, A15128, A15143, A16074, A16093, A18008, A18129, A18166].
Patent publication(s) using this strain [JP2013-184956A, WO/2013/031973 , 2015-71604].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Escherichia hermannii
JCM number: 1473 <-- Y. Kosako 83024 <-- R. Sakazaki 82073 <-- D. J. Brenner CDC 980-72 <-- Louisiana State Health Dept., USA.
Source: Infected toe of a 17-year-old female, LA, USA [478].
Biochemistry/Physiology: [478].
G+C (mol%): 52.4 (Tm) [478].
DNA-DNA relatedness: [478].
Phylogeny: 16S rRNA gene (AB682276, JN175345).
Genome sequence: BAFF00000000, LR134136.

Publication(s) using this strain [A11328, A11333, A12058, A13555, A15493, A17527].
Patent publication(s) using this strain [JP2011-000045A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Brevundimonas vesicularis
JCM number: 1477 <-- Y. Kosako 85012 <-- Nissui Pharm. Co., Ltd. <-- ATCC 11426 <-- G. J. Jann <-- E. Morse <-- R. Breed <-- K. Büsing.
Source: Urinary-bladder epithelium of leech (Hirudo).
Biochemistry/Physiology: [2031].
G+C (mol%): 65.8 (Tm) [2031].
Phylogeny: 16S rRNA gene (AB021414, AJ007801, AJ227780).
Genome sequence: BCWM00000000.

Patent publication(s) using this strain [JP2012-10635A, JP2012-41A, WO2012/002575].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Suttonella indologenes
JCM number: 1478 <-- R. Sakazaki <-- ATCC 25869 <-- O. P. van Bijsteveld (Moraxella sp.).
Source: Angular conjunctivitis [10332,10334].
Morphology: [10332,10334].
Biochemistry/Physiology: [10332,10334].
G+C (mol%): 48.7 (Tm) [10334].
Phylogeny: 16S rRNA gene (M35015) [10332], 16S rRNA gene (LC050182).
Genome sequence: UHIA00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cellulomonas gelida
JCM number: 1490 <-- K. Suzuki CNF 198 <-- AJ 1567 <-- ATCC 488 <-- N. R. Smith NRS 126.
Source: Soil, Storrs, CT, USA [269].
Biochemistry/Physiology: [255,266].
Cell wall: Type A4β (L-Orn-D-Glu) [227,251]; neutral polysaccharide (Glc) [2883].
Serology: [268].
G+C (mol%): 72.4 (Tm) [125].
DNA-DNA relatedness: [266].
Phylogeny: 16S rRNA gene (X79461, X83800) [3946].
Taxonomy: [250,256,266].
Genome sequence: BJLQ00000000.
More information: Glucose breakdown pathway [267]; Polar multitrichous flagella [1068].

Publication(s) using this strain [B13411].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cellulomonas uda
JCM number: 1492 <-- K. Suzuki CNF 200 <-- AJ 1568 <-- ATCC 491 <-- N. R. Smith NRS 136.
Source: Compost from Arlington, VA, USA [269].
Biochemistry/Physiology: [255,266].
Cell wall: Type A4β (L-Orn-D-Glu) [227,251]; neutral polysaccharide (Man, Glc) [2883].
Serology: [268].
G+C (mol%): 72.0 (Tm) [125].
DNA-DNA relatedness: [266].
Phylogeny: 16S rRNA gene (X79457, X83801) [3946].
Taxonomy: [250,256,266].
Genome sequence: BJLP00000000.
More information: Glucose breakdown pathway [267]; Cellobiose phosphorylase [1011]; Polar multitrichous flagella [1068].

Publication(s) using this strain [B13411].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bradyrhizobium oligotrophicum
JCM number: 1494 <-- H. Ohta <-- T. Hattori S58.
Source: Paddy field soil in Miyagi Pref., Japan.
Biochemistry/Physiology: [449].
Fatty acid: [449].
Quinone: Q-10 [449].
G+C (mol%): 64.7 (Tm) [449], 65.1 (Tm) [9431].
DNA-DNA relatedness: [9431].
Phylogeny: 16S rRNA gene (D78366, JQ619230) [7946,9431], recA (JQ619231), atpD (JQ619232), glnII (JQ619233) [9431].
Taxonomy: [449,9431].
Genome sequence: AP012603.
More information: Oligotroph [449,450]; Nitrogen fixing activity [449]; Growth characteristics [2550]; Respiratory characteristics [2551]; Degradation of ferulic acid [7947].

Publication(s) using this strain [A11286, A13412].
Patent publication(s) using this strain [JP2008-253271A, JP2012-157360A, JP2014-166191A, US20160304915].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida homilentoma
JCM number: 1507 <-- AJ 14322 <-- J. P. van der Walt.
Source: Frass from beetle gallery of Sinoxylon ruficorne (Coleoptera, Bostrichidae) in red bushwillow Combretum apiculatum (Myrtales, Combretaceae) [289].
Locality: Nijlstroom, Transvaal, South Africa.
Quinone: Q-8 [5119].
G+C (mol%): 49.0 [289].
Phylogeny: D1/D2 region fo 26S rRNA gene (U45716) [4293,4520]; 18S rRNA gene (AB018166) [4712].
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: BCGB00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13795.
 
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Publication(s) using this strain [A18085].
Positive phenotypes
 <Fermentation>Galactose   Trehalose
 <Growth>in 10% NaCl   on 50% Glucose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saturnispora zaruensis
JCM number: 1515 <-- AJ 4142 <-- T. Nakase J-7.
Source: Exudate of oak Quercus serrata (Fagales, Fagaceae) [201].
Quinone: Q-7 [204].
Serology: [1135].
G+C (mol%): 36.3 [203].
Phylogeny: D1/D2 region of 26S rRNA gene (U94933) [4520], 18S rRNA gene (AB053249).
Other taxonomic data: PMR spectrum of polysaccharide [1135].
Genome sequence: PPIM00000000.
 
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Positive phenotypes

 <Fermentation>Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Debaryomyces hansenii
JCM number: 1526 <-- AJ 5449 <-- T. Tsuchiya J-8001.
Locality: France.
Quinone: Q-9 [354].
Enzyme electrophoretic profile: [1778].
Serology: [1147,1777].
G+C (mol%): 36.8 [358].
DNA-DNA relatedness: [1777].
Other taxonomic data: PMR spectrum of polysaccharide [1777]; Lysis by β-1,3-glucanase and reducing agent [1066].
Genome sequence: QGFY00000000.
More information: Type strain of Debaryomyces kloeckeri.

Positive phenotypes

 <Growth>in 10% NaCl   in 16% NaCl   on 50% Glucose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Debaryomyces maramus
JCM number: 1528 <-- AJ 5054 <-- CBS 1958 <-- M. E. di Menna.
Source: Air [501].
Locality: New Zealand.
Quinone: Q-9 [354].
Enzyme electrophoretic profile: [1001].
G+C (mol%): 36.6 [358].
DNA-DNA relatedness: [1128].
Phylogeny: D1/D2 region of 26S rRNA gene (U45838) [4293,4520], 18S rRNA gene (AB054261), 18S & 25S rRNA genes [3197].
Genome sequence: PPOS00000000.
More information: DNA barcode marker [9081].
Production: Riboflavin.
 
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Publication(s) using this strain [A12345].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Vanrija fragicola
JCM number: 1530 <-- AJ 4683 <-- T. Nakase.
Source: Strawberry [195].
Locality: Market in Akihabara, Tokyo, Japan.
Quinone: Q-10 [209].
G+C (mol%): 58.8 (Tm) [195].
Phylogeny: D1/D2 region of 26S rRNA gene (AB126585), 18S rRNA gene (AB035588) [4953], ITS & 5.8S rRNA gene (AB035588) [4953].
Genome sequence: BEDY00000000.
 
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Publication(s) using this strain [A18562].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cutaneotrichosporon curvatus
JCM number: 1532 <-- AJ 4763 <-- ATCC 10567 <-- NRRL Y-1511 <-- CBS 570 <-- A. A. Meinders.
Biosafety level 2.
Source: Sputum of tubercular patient.
Locality: The Netherlands.
Quinone: Q-10 [209].
G+C (mol%): 59.8 (Tm) [195].
Phylogeny: 18S rRNA gene (AB032626) [4714,4953], D1/D2 region of 26S rRNA gene (AF189834) [4751], ITS & 5.8S rRNA gene (AB035574) [4953].
Other taxonomic data: Component sugars [363].
Genome sequence: BCJH00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13877.

Publication(s) using this strain [A05186, A14206, A15572, A18562].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida sorboxylosa
JCM number: 1536 <-- AJ 4437 <-- T. Nakase.
Source: Fruit of Ananas comosus (Pineapple) [193].
Morphology: [193].
Biochemistry/Physiology: [193].
Quinone: Q-7 [5119].
Serology: [1038].
G+C (mol%): 39.8 [193].
Phylogeny: D1/D2 region of 26S rRNA gene (U62314) [4293,4520], 18S rRNA gene (AB054672).
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: BCGC00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13796.
 
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Publication(s) using this strain [A18085].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pichia guilliermondii
JCM number: 1539 <-- T. Shinoda <-- CBS 566 <-- A. Castellani.
Source: Sputum [357].
Quinone: Q-9 [5119].
Phylogeny: D1/D2 region of LSU rRNA gene (AJ508562); 18S rRNA gene (AB013587) [4568]; ITS & 5.8S rRNA gene (AB032176).
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: AAFM00000000, PQND00000000.
More information: CUG codon usage [4568].
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Erythrobasidium hasegawianum
JCM number: 1545 <-- IFO 1058 <-- ATCC 9536 <-- W. J. Robbins (Rhodotorula aurantiaca) <-- M. Wahl.
Source: Old culture of beer yeast [1000].
Morphology: [2686].
Biochemistry/Physiology: [1000].
Fatty acid: [3921].
Quinone: Q-10(H2) [206,1134].
G+C (mol%): 50.0 [205].
Phylogeny: D1/D2 region of 26S rRNA gene (AF131058, AF189899) [4751], 18S rRNA gene (D12803) [3859], 18S rRNA gene (D10790) [3339], ITS (AF444522), elongation factor 1 gene (AB127097).
Taxonomy: [1000,2686,3184,3861].
Genome sequence: BCII00000000.
More information: CUG codon usage [4676].
 
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Publication(s) using this strain [A06223].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus rhamnosus
JCM number: 1553 <-- ATCC 11443 <-- M. Brin (Lactobacillus delbrueckii).
DNA typing: Ribotype [4925].
Other taxonomic data: MALDI-TOF MS [9228].
Genome sequence: CP022109.
Production: L-(+)-Lactic acid [617].
Assay: Optically active isomers of lactic acid [342].
 
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Publication(s) using this strain [A12354, A18498].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus delbrueckii subsp. lactis
JCM number: 1557 <-- ATCC 7830 <-- R. P. Tittsler 313 <-- E. McCoy Ld5 (Lactobacillus delbrueckii).
Cell wall: [587].
G+C (mol%): 50.5 [011].
DNA-DNA relatedness: [602].
Genome sequence: BJLK00000000, CP018156.
Assay: Vitamin B12 [590].

Publication(s) using this strain [A04201].
Patent publication(s) using this strain [JP2010-158216A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus pentosus
JCM number: 1558 <-- ATCC 8041 <-- E. E. Snell 124-2.
Source: Corn silage [3130].
Cell wall: [587].
G+C (mol%): 43.8 [587], 46.1 (Tm) [3130].
DNA-DNA relatedness: [012,3130].
Phylogeny: 16S rRNA [2983], 16S rRNA gene (D79211, LC071808).
Genome sequence: AZCU00000000, BJZC00000000, CP032757, CP032758 (plasmid unnamed1), PUFM00000000.
Assay: Biotin, nicotinic and pantothenic acids [088].
 
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Publication(s) using this strain [A06220, A06222, A07011, A08260, A08271, A09007, A11065, A11363, A12090, A12294, A12306, A12363, A12378, A12379, A13443, A13552, A15168, A16012, A16524, A16525, A17124, A17501, A18143, A18169, A18528].
Patent publication(s) using this strain [JP2007-290998A, JP2008-295379A, WO2008/130036, WO2009/041415, JP2010-124720A, JP2010-239867A, JP2010-239868A, US 20100267094 A1, WO2010/110045, JP2011-004620A, JP2011-103879A, JP2012-147759A, JP2012-100655A, WO2012/091081 , WO/2014/171478 , US20140242643, CN104336416 A, CN104357353 A, CN106173246, WO/2016/143745, 2016-171814, 2016-073314, 2016-037451, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus brevis
JCM number: 1559 <-- ATCC 8287 <-- R. H. Vaughn 269Y.
Source: Green, fermenting Sevillano variety olives.
Genome sequence: BEWS00000000, UGNS00000000.
Assay: Cytosine and uracil [6687].

Patent publication(s) using this strain [JP2010-124720A, JP2013-233110A, 2016-067248].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aspergillus glaucus
JCM number: 1575 <-- CBS 516.65 <-- K. B. Raper.
Source: Unpainted board [309].
Locality: Washington, USA [309].
Description: [4500].
Morphology: [302,303,309], Aspergillus mangini [313,319].
Genome sequence: LSTL00000000.
More information: Ex-neotype of Mucor herbariorum, Eurotium herbariorum, Asp. herbariorum [309], and Asp. glaucus; Herbarium specimens DAOM 137960 (neotype), CBS H-7123.
 
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Publication(s) using this strain [A08178, A09260, A14108, A18479].
Patent publication(s) using this strain [JP2011-155911A, JP2011-155912A, 2016-005447, 2017-006053].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Apiotrichum brassicae
JCM number: 1599 <-- AJ 4833 <-- T. Nakase.
Source: Cabbage purchased in a market [199].
Locality: Tokyo, Japan.
Quinone: Q-9 [1132].
G+C (mol%): 54.9 [199].
Phylogeny: 18S rRNA gene (AB001731) [4347], D1/D2 region of 26S rRNA gene (AF075521) [4751].
Genome sequence: BCJI00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13878.
 
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Publication(s) using this strain [A15572, A18562].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida intermedia
JCM number: 1607 <-- IAM 12185 <-- AJ 4619 <-- IFO 0761 <-- CBS 572 <-- M. Langeron <-- B. K. Ashford.
Source: Feces [357].
Locality: Puerto Rico.
Quinone: Q-9 [5119].
Serology: [1146].
G+C (mol%): 44.4 (Tm) [195].
Phylogeny: 18S rRNA gene (AB013571) [4568], D1/D2 region of 26S rRNA gene (U44809) [4293,4520], elongation factor 1 gene (AY497650).
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: BCGD00000000.
More information: CUG codon usage [4568].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13797.
 
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Publication(s) using this strain [A04004, A14206, A16095, A18085].
Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Galactose   Maltose   Sucrose
 <Growth>in 10% NaCl

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Issatchenkia orientalis
JCM number: 1609 <-- IAM 12186 <-- AJ 4457 <-- ATCC 6258 <-- A. Castellani.
Biosafety level 2.
Source: Sputum [283].
Locality: Mahara Jail, Colombo, Sri Lanka.
Quinone: Q-7 [285,5119].
Serology: [1038].
G+C (mol%): 39.3 (Tm) [195], 39.6 (Tm) [502], 40.0 (Bd) [285].
DNA-DNA relatedness: [285].
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: CP028773 (chromosome 1), CP028774 (chromosome 2), CP028775 (chromosome 3), CP028776 (chromosome 4), CP028777 (chromosome 5).
More information: Type strain of Candida krusei.

Publication(s) using this strain [A14206, A15518].
Patent publication(s) using this strain [JP2008-206516A, JP2008-278858A, JP2008-278859A, JP2008-278860A, JP2008-278861A, JP2008-278862A, JP2008-278863A, JP2008-278864A, JP2008-278866A, JP2008-278867A, JP2008-278868A, JP2008-278869A, JP2008-278870A, JP2008-278857A, JP2008-278856A, JP2008-278843A, JP2008-278844A, JP2008-278845A, JP2008-278846A, JP2008-278847A, JP2008-278848A, JP2008-278849A, JP2008-278850A, JP2008-278851A, JP2008-278852A, JP2008-278854A, JP2008-278855A, US 20110086358 B2, US 20120172257 A1].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida parapsilosis
JCM number: 1618 <-- IAM 12192 <-- AJ 4569 <-- IFO 0708 <-- ATCC 7330 <-- L. Black.
Source: Healthy human skin.
Serology: [456].
G+C (mol%): 40.0 (Tm) [195].
Genome sequence: CBZQ000000000.

Publication(s) using this strain [A06043].
Patent publication(s) using this strain [JP2008-278843A, JP2008-278859A, JP2008-278860A, JP2008-278861A, JP2008-278862A, JP2008-278863A, JP2008-278864A, JP2008-278866A, JP2008-278867A, JP2008-278868A, JP2008-278869A, JP2008-278870A, JP2008-278858A, JP2008-278857A, JP2008-278856A, JP2008-278844A, JP2008-278845A, JP2008-278846A, JP2008-278847A, JP2008-278848A, JP2008-278849A, JP2008-278850A, JP2008-278851A, JP2008-278852A, JP2008-278854A, JP2008-278855A, US 20110086358 B2, US 20120172257 A1].
Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Galactose
 <Growth>at 37C   in 10% NaCl   in 16% NaCl   on 50% Glucose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Diutina rugosa
JCM number: 1619 <-- IAM 12198 <-- AJ 4644 <-- IFO 0750 <-- NRRL Y-1496.
Biosafety level 2.
Source: Human feces [295].
Quinone: Q-9 [5119].
G+C (mol%): 50.2 (Tm) [195].
Phylogeny: 18S rRNA gene (AB013502) [4568], D1/D2 region of 26S rRNA gene (U45727) [4293,4520], actin gene (FJ768933).
Other taxonomic data: Cellular carbohydrate composition [5119]; PMR spectrum of polysaccharide [198,291]; Component sugars [363].
Genome sequence: SWFT00000000.
More information: CUG codon usage [4568].

Publication(s) using this strain [A04004, A06218, A16095, A18092].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Priceomyces haplophilus
JCM number: 1635 <-- IAM 12268 <-- IFO 0947 <-- UCD 52-11.
Source: Bark beetle Dendroctonus jeffreyi (Coleoptera, Scolytidae) in Pinus jeffreyi (Pinales, Pinaceae) [1453].
Locality: California, USA.
Quinone: Q-9 [204].
G+C (mol%): 39.0 [203].
Phylogeny: D1/D2 region of 26S rRNA gene (U45770) [4293,4520], 18S rRNA gene (AB054284), ITS & 5.8S rRNA gene (AB054117).
Genome sequence: BCIF00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13851.
 
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Publication(s) using this strain [A18085].
Positive phenotypes

 <Assimilation>Hexadecane

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida tanzawaensis
JCM number: 1648 <-- AJ 4916 <-- T. Nakase.
Source: Moss, Polytrichum commune L. [2456].
Locality: Mt. Tanzawa, Kanagawa Pref., Japan [2456].
Morphology: [2456].
Biochemistry/Physiology: [2456].
Quinone: Q-9 [2456,5119].
G+C (mol%): 45.05±0.56 (Tm) [2456], 44.11±0.07 (HPLC) [2456].
DNA-DNA relatedness: [2456].
Phylogeny: 18S rRNA gene (AB013504) [4568], D1/D2 region of 26S rRNA gene (U44811) [4293,4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
Taxonomy: [2456].
Genome sequence: LYME00000000.
More information: CUG codon usage [4568]; Killer yeast (kills CBS 1338).
 
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Positive phenotypes

 <Fermentation>Trehalose
 <Growth>in 10% NaCl

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Escherichia coli
JCM number: 1649 <-- Y. Kosako 82039 <-- R. Sakazaki <-- ATCC 11775 <-- NCTC 9001 <-- F. Kauffmann U 5/41.
Biosafety level 2.
Source: Urine [639].
Biochemistry/Physiology: [478].
Serotype: O1:K1:H7 [639].
G+C (mol%): 49.2 (Tm) [182].
Phylogeny: 16S rRNA gene (X80725, LC069032), gyrB (AB083821).
Genome sequence: CAADIS000000000, CP033092.
More information: Pathogenic to chickens [639].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12168.
 
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Publication(s) using this strain [A04020, A04069, A04070, A04168, A04170, A04172, A04197, A05195, A06038, A06040, A06191, A06220, A06226, A07006, A07173, A07203, A07208, A07216, A07222, A07252, A07253, A07261, A08019, A08210, A08217, A08245, A08283, A09007, A09199, A09203, A09205, A09206, A09219, A09256, A09284, A10091, A10248, A11280, A11311, A12041, A12287, A12361, A12375, A13162, A13486, A13503, A14009, A14118, A14149, A14162, A14470, A14477, A14528, A15168, A15201, A15565, A15601, A16074, A16093, A16094, A16513, A16542, A16577, A17151, A17522, A18129, A18168, A18499].
Patent publication(s) using this strain [WO2007/020884, JP2007-289178A, JP2007-289177A, JP2007-111017A, WO2007/023588, WO2007/114398, JP2008-118914A, JP2008-118913A, JP2008-263859A, JP2008-291016A, JP2008-118912A, JP2008-118911A, JP2008-118910A, JP2008-118909A, JP2008-118908A, JP2008-118906A, JP2008-048652A, JP2008-118904A, JP2009-279001A, JP2009-279002A, JP2009-142436A, JP2009-126845A, JP2009-279000A, JP2010-004890A, JP2010-265234A, JP2010-180137A, JP2010-148468A, WO2010/137354, WO2011/024216, JP2011-254730A, JP2011-217734A, JP2011-193844A, JP2011-006346A, US 20080113364 B2, JP2013-252145A, JP2013-240356A, JP2013-240355A, JP2013-177678A, CN 102978290 A, WO2014/021351, WO2014/021352, JP2014-083022A, JP2014-012846A, 2015-116191, 2015-164416, 2015-139434, 2015-136340, AU2015215750, 2016-220628].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Shimwellia blattae
JCM number: 1650 <-- Y. Kosako <-- R. Sakazaki <-- CDC 9005-74 <-- N. R. H. Burgess.
Source: Hindgut of cockroach.
Biochemistry/Physiology: [8084].
Phylogeny: 16S rRNA gene (FJ267520, JN175333), fusA (FJ267524), leuS (FJ267525), pyrG (FJ267526), rpoB (FJ267527) [8084].
Other taxonomic data: DNA hybridization reference strain.
Taxonomy: [8084].
Genome sequence: BAHA00000000, CP001560, LR134215.

Publication(s) using this strain [A11328, A12396].
Patent publication(s) using this strain [JP2012-80875A, 2016-047066].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Salmonella enterica subsp. enterica
JCM number: 1651 <-- R. Sakazaki 49 <-- ATCC 13312 <-- NCTC 5735 <-- F. Kauffmann 1348, K.34.
Biosafety level 2.
Phylogeny: 16S rRNA gene (AB626116).
Taxonomy: [5956,5957].
Genome sequence: QICV00000000.
More information: Type strain of Salmonella choleraesuis [211,596].
 
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Publication(s) using this strain [B15089].
Patent publication(s) using this strain [JP2007-289169A, JP2007-289180A, JP2007-289179A, JP2007-289178A, JP2007-289177A, JP2007-289176A, JP2007-289175A, JP2007-289174A, JP2007-289173A, JP2007-289172A, JP2007-289171A, JP2007-289170A, US 20080113364 B2].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Salmonella enterica subsp. enterica
JCM number: 1652 <-- R. Sakazaki <-- ATCC 13311 <-- NCTC 74 (strain Mutton).
Biosafety level 2.
Source: Human feces (food poisoning in man).
Phylogeny: 16S rRNA gene (AB594754, X80681).
Taxonomy: [5956,5957].
Genome sequence: CP009102 [12498], CP009103 (plasmid pSTY1) [12498].
More information: Type strain of Salmonella typhimurium [596].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 06236.

Publication(s) using this strain [A04197, A05195, A07234, A09215, A09239, A13069, A13172, A13540, A17527, A17575, A18436, A18559].
Patent publication(s) using this strain [WO2007/023912, JP2007-124985A, JP2009-242275A, JP2009-142436A, WO2010/101237, JP2012-44911A, JP2013-177678A, JP2014-019693A, 2015-39320, 2015-38108, 2016-104726].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Salmonella enterica subsp. salamae
JCM number: 1653 <-- R. Sakazaki <-- NCTC 5773 <-- F. Kauffmann 72.
Biosafety level 2.
Biochemistry/Physiology: [2658,2659].
DNA-DNA relatedness: [2658].
Phylogeny: 16S rRNA gene (EU014685).
Genome sequence: LR134141, VXJT00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Salmonella enterica subsp. arizonae
JCM number: 1654 <-- R. Sakazaki <-- CIP 82.30 <-- L. Le Minor 409 <-- P. R. Edwards DC5.
Biosafety level 2.
Biochemistry/Physiology: [2658,2659].
DNA-DNA relatedness: [2658].
Phylogeny: 16S rRNA gene (AF008580, EU014683).
Genome sequence: UGXG00000000, VXJW00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Salmonella enterica subsp. houtenae
JCM number: 1655 <-- R. Sakazaki <-- NCTC 10401 <-- F. Kauffmann.
Biosafety level 2.
Biochemistry/Physiology: [2658,2659].
DNA-DNA relatedness: [2658].
Phylogeny: 16S rRNA gene (LC060908).
Genome sequence: CAADIQ000000000, LS483478, VXJU00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Edwardsiella tarda
JCM number: 1656 <-- Y. Kosako 82051 <-- R. Sakazaki 123 <-- ATCC 15947 <-- CDC 1483-59 <-- Kentucky State Health Dept., USA.
Biosafety level 2.
Source: Human feces [539].
Biochemistry/Physiology: [539].
Phylogeny: 16S rRNA gene (AB050827).
Genome sequence: AFJG00000000 [12657], BANW00000000, QDAC00000000, UFYP00000000.
More information: Serogroup O1483:H1 [540].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 09009.

Publication(s) using this strain [A11246, A12326, A12404, A17527, A18129, A18557].
Patent publication(s) using this strain [2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Citrobacter freundii
JCM number: 1657 <-- R. Sakazaki 96 <-- ATCC 8090 <-- C. H. Werkman.
Biosafety level 2.
Phylogeny: 16S rRNA gene (AB626119, AB680314, AJ233408).
Genome sequence: ANAV00000000 [9560].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12761.
 
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Publication(s) using this strain [A04069, A04168, A04172, A04197, A07173, A10272, A12326, A12375, A14128, A14162, A15197, A18129, A18476].
Patent publication(s) using this strain [JP2009-142255A, WO2011/007802, JP2012-44911A, JP2012-29687A, 2015-146828, 2015-164416, AU2015215750, 2016-220690, 2017-184772, 2017-184771, 2017-070266, 2017-201986].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Citrobacter koseri
JCM number: 1658 <-- R. Sakazaki <-- ATCC 27028 <-- W. Frederiksen 14804.
Source: Blood culture.
Serology: [537].
Phylogeny: 16S rRNA gene (HF558364).
Genome sequence: UAVY00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 09008.

Publication(s) using this strain [A12326, A12366, A18071, A18129].
Patent publication(s) using this strain [WO2007/010641, WO2007/094077, JP2008-067718A, JP2008-079617A, JP2008-173132A, JP2009-261363A, WO2011/010740, US20160298181].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Citrobacter koseri
JCM number: 1659 <-- R. Sakazaki <-- ATCC 27156 <-- W. H. Ewing CDC 3613-63.
Biochemistry/Physiology: [1730].
DNA-DNA relatedness: [1730].
Phylogeny: 16S rRNA gene (AB682264, AF025372, LC060909).
Genome sequence: CAADIR000000000.
More information: Type strain of Citrobacter diversus [596].

Publication(s) using this strain [A12375, A17527].
Patent publication(s) using this strain [JP2007-124985A, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Citrobacter amalonaticus
JCM number: 1661 <-- Y. Kosako 82056 <-- R. Sakazaki 18 <-- ATCC 25405 <-- V. M. Young 9823.
Source: Stool [535].
Biochemistry/Physiology: [535].
Phylogeny: 16S rRNA gene (FR870441).
Genome sequence: UFVN00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 14168.

Publication(s) using this strain [A12326].
Patent publication(s) using this strain [JP2009-261363A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Klebsiella pneumoniae subsp. pneumoniae
JCM number: 1662 <-- Y. Kosako 82057 <-- R. Sakazaki 171 <-- ATCC 13883 <-- NCTC 9633 <-- CDC 298-53.
Biosafety level 2.
Biochemistry/Physiology: [132,640,3052].
G+C (mol%): 34.9 (Tm) [195].
Phylogeny: 16S rRNA gene (AB004753, AB594768, AF130981, AJ233420, X87276, Y17656).
Genome sequence: AJJI00000000 [12497], BAKZ00000000, BCTV00000000.
More information: Control strain for API identification system API 10S, API 20E [639].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07706.

Publication(s) using this strain [A04069, A04072, A04168, A04172, A04184, A04197, A07173, A08278, A09239, A10272, A12326, A12422, A12431, A13162, A14128, A17527, A18129, A18499].
Patent publication(s) using this strain [JP2007-112805A, WO2010/061915, WO2010/101237, WO2010/137594, WO2012/015037, 2015-164416, 2015-38108, 2016-104726, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Klebsiella pneumoniae subsp. ozaenae
JCM number: 1663 <-- Y. Kosako 82058 <-- R. Sakazaki <-- ATCC 11296 <-- Walter Reed Army Med. Center, AMC 35-E-5.
Biosafety level 2.
Source: Nose [640].
Biochemistry/Physiology: [640,3052].
Phylogeny: 16S rRNA gene (AF130982, Y17654).
Genome sequence: BCZL00000000.
More information: Serogroup Type 4 = D [640].

Publication(s) using this strain [A04072, A12091, A12424, A18179].
Patent publication(s) using this strain [JP2013-085503A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Klebsiella pneumoniae subsp. rhinoscleromatis
JCM number: 1664 <-- R. Sakazaki 191 <-- ATCC 13884 <-- NCTC 5046 <-- E. Snijders R-70.
Biosafety level 2.
Source: Nose of a patient, Sumatra [3052].
Biochemistry/Physiology: [3052].
Phylogeny: 16S rRNA gene (AF130983).
Genome sequence: ACZD00000000.

Patent publication(s) using this strain [JP2012-50373A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Klebsiella oxytoca
JCM number: 1665 <-- Y. Kosako 82060 <-- R. Sakazaki 181 <-- ATCC 13182 <-- R. Hugh 479-2.
Biosafety level 2.
Source: Pharyngeal tonsil [538].
Biochemistry/Physiology: [538,3052].
Phylogeny: 16S rRNA gene (AB004754, AF129440, AJ871858, U78183, Y17655).
Genome sequence: BCZK00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 09011.

Publication(s) using this strain [A08018, A08281, A12091, A12326, A12424, A14476, A17527, A18129, A18179, A18476].
Patent publication(s) using this strain [WO2007/094077, WO2007/010641, JP2008-067718A, JP2008-079617A, JP2008-173132A, WO2011/010740, JP2012-44911A, JP2012-29687A, JP2013-085503A, 2015-164416, AU2015215750, US20160298181, 2017-139981, 2017-070266].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hafnia alvei
JCM number: 1666 <-- Y. Kosako 82061 <-- R. Sakazaki 286 <-- ATCC 13337 <-- NCTC 8105 <-- C. A. Stuart (type 32011).
Biochemistry/Physiology: [471,472].
DNA-DNA relatedness: [1540].
Phylogeny: 16S rRNA gene (M59155).
Genome sequence: JMPK00000000, RCWP00000000, UGHP00000000.
More information: Pathogenicity [471].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 14167.

Publication(s) using this strain [A04168, A07009, A07173, A08268, A12326, A12366, A14162, A14477, A17527, A18129, A18463].
Patent publication(s) using this strain [JP2009-261363A, WO2011/010740, 2015-164416, AU2015215750, US20160298181].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Leclercia adecarboxylata
JCM number: 1667 <-- ATCC 23216 <-- H. Leclerc 1783.
Biosafety level 2.
Source: Drinking water.
Biochemistry/Physiology: [2151].
DNA-DNA relatedness: [2151].
Phylogeny: 16S rRNA gene (GQ856082, JN175338).
Taxonomy: [2151].
Genome sequence: BCNP00000000, JMPM00000000, LR590464.

Publication(s) using this strain [A08268, A12366, A18071, A18463].
Patent publication(s) using this strain [JP2009-261363A, WO2011/010740, US20160298181].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Proteus hauseri
JCM number: 1668 <-- Y. Kosako 82063 <-- R. Sakazaki 366 <-- ATCC 13315 <-- NCTC 4175 <-- Pribram Collection <-- K. B. Lehmann.
Biochemistry/Physiology: [467,468,469,470].
Serology: [466].
DNA-DNA relatedness: [7164].
Phylogeny: 16S rRNA gene (AB594762, AJ233425, DQ885262, LC060911).
Taxonomy: [470,7164,10498].
Genome sequence: PGWU00000000 [12577].
More information: Formerly designated as the type strain of Proteus vulgaris [596,10498].

Publication(s) using this strain [A04032, A04159, A04197, A07009, A11246, A12326, A17533, A18205].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Proteus mirabilis
JCM number: 1669 <-- R. Sakazaki 4030 <-- ATCC 29906 <-- CDC PR14.
Biosafety level 2.
Biochemistry/Physiology: [1730].
DNA-DNA relatedness: [1730].
Phylogeny: 16S rRNA gene (AF008582, AJ301682, DQ885256, LC060912).
Genome sequence: ACLE00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12762.

Publication(s) using this strain [A04168, A04197, A07173, A11246, A12326, A13162, A14162, A15197, A16513, A17527, A18004, A18129].
Patent publication(s) using this strain [JP2012-44911A, JP2013-169190A, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cosenzaea myxofaciens
JCM number: 1670 <-- Y. Kosako <-- R. Sakazaki <-- ATCC 19692 <-- B. J. Cosenza.
Source: Gypsy moth Portheria dispar larvae [1216,8699].
Biochemistry/Physiology: [1216,8699].
G+C (mol%): 36.5 (HPLC) [8699].
Phylogeny: 16S rRNA gene (DQ885259), rpoB (DQ836275) [8699].
Genome sequence: LXEN00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Morganella morganii subsp. morganii
JCM number: 1672 <-- R. Sakazaki <-- ATCC 25830 <-- M. J. Pelczar M11 <-- NCTC 235 <-- H. de R. Morgan.
Biosafety level 2.
Source: Patient with summer diarrhoea [977].
Biochemistry/Physiology: [977].
Phylogeny: 16S rRNA gene (AB089243, AJ301681).
Genome sequence: BCZU00000000, CP034944, LR133904.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12763.

Publication(s) using this strain [A04078, A07005, A07009, A11246, A12091, A12097, A12326, A12424, A15197, A18129, A18179].
Patent publication(s) using this strain [JP2012-44911A, JP2013-085503A, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Providencia alcalifaciens
JCM number: 1673 <-- R. Sakazaki <-- ATCC 9886 <-- R. E. Buchanan <-- L. de Salles Gomes.
Source: Feces.
Serotype: O19:H2.
Phylogeny: 16S rRNA gene (AJ301684).
Other taxonomic data: No gas from glucose.
Genome sequence: ABXW00000000.

Publication(s) using this strain [A11246, A12326, A13467, A16468, A18129].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Providencia rettgeri
JCM number: 1675 <-- R. Sakazaki 396 <-- D. J. Brenner 1163.
Biochemistry/Physiology: [0138].
DNA-DNA relatedness: [0138].
Phylogeny: 16S rRNA gene (AM040492).
Genome sequence: UGTZ00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12764.

Publication(s) using this strain [A11246, A13467, A15197].
Patent publication(s) using this strain [JP2007-289174A, JP2007-289177A, JP2007-289176A, JP2007-289175A, JP2007-289179A, JP2007-289173A, JP2007-289172A, JP2007-289171A, JP2007-289170A, JP2007-289169A, JP2007-289180A, JP2007-289178A, US 20080113364 B2, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yersinia pseudotuberculosis
JCM number: 1676 <-- R. Sakazaki 22176 <-- NCTC 10275 <-- E. Thal.
Biosafety level 2.
Source: Turkey.
Phylogeny: 16S rRNA gene (AF366375).
Genome sequence: BAUR00000000, LR134373.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Edwardsiella hoshinae
JCM number: 1679 <-- Y. Kosako 82074 <-- R. Sakazaki 136 <-- P. A. D. Grimont 2-78.
Source: Female puffin.
Biochemistry/Physiology: [174].
G+C (mol%): 55.7±0.1 (Tm) [174].
DNA-DNA relatedness: [174].
Phylogeny: 16S rRNA gene (AB050825).
Genome sequence: BAUC00000000.

Publication(s) using this strain [A07233].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Edwardsiella ictaluri
JCM number: 1680 <-- R. Sakazaki 146 <-- ATCC 33202 <-- J. P. Hawke GA77-52.
Source: Channel catfish (Ictalurus punctatus) [168].
Biochemistry/Physiology: [168].
DNA-DNA relatedness: [168].
Phylogeny: 16S rRNA gene (AB050826).
Genome sequence: AFJI00000000 [12657], UFXT00000000.

Publication(s) using this strain [A07233, A09262, A12404, A14163, A18556].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rahnella aquatilis
JCM number: 1683 <-- Y. Kosako 82078 <-- R. Sakazaki 266 <-- H. Leclerc 133.
Source: Drinking water [473].
Biochemistry/Physiology: [473].
G+C (mol%): 51.3 (Tm) [473].
DNA-DNA relatedness: [473].
Phylogeny: 16S rRNA gene (AJ233426).
Genome sequence: CP003244 [12496], CP003245 (plasmid pRahaq201) [12496], CP003246 (plasmid pRahaq202) [12496], JMPO00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 09013.

Publication(s) using this strain [A12058, A13501, A18071].
Patent publication(s) using this strain [JP2008-289434A, JP2013-169190A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cedecea lapagei
JCM number: 1684 <-- Y. Kosako 82079 <-- R. Sakazaki 275 <-- CDC 485-76 <-- Canadian CDC.
Source: Throat, Canada [189].
Biochemistry/Physiology: [189].
G+C (mol%): 48.1±0.9 (Tm) [189].
DNA-DNA relatedness: [189].
Phylogeny: 16S rRNA gene (LC036260, LC036261, LC036262).
Genome sequence: LR134201.

Publication(s) using this strain [A17527].
Patent publication(s) using this strain [JP2008-289434A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cedecea davisae
JCM number: 1685 <-- Y. Kosako 82080 <-- R. Sakazaki 282 <-- CDC 3278-77 <-- P. A. D. Grimont 005.
Source: Stool, NJ, USA [189].
Biochemistry/Physiology: [189].
G+C (mol%): 48.8±0.8 (Tm) [189].
DNA-DNA relatedness: [189].
Phylogeny: 16S rRNA gene (AF493976).
Genome sequence: ATDT00000000, UFVK00000000.

Publication(s) using this strain [A11246, A12366].
Patent publication(s) using this strain [WO2011/010740, US20160298181].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Raoultella terrigena
JCM number: 1687 <-- Y. Kosako 82083 <-- R. Sakazaki 496 <-- H. Leclerc CUETM 77-176 <-- F. Gavini L84.
Source: Drinking water [169].
Biochemistry/Physiology: [169,480,3052].
Numerical taxonomy: [480].
G+C (mol%): 56.7 (Tm) [169].
DNA-DNA relatedness: [169].
Phylogeny: 16S rRNA gene (AF129442, LC060919, Y17658).
Taxonomy: [5462].
Genome sequence: BJNO00000000, CAADJG00000000.

Publication(s) using this strain [A08268, A12416, A18463].
Patent publication(s) using this strain [JP2007-124985A, JP2009-142255A, JP2009-142256A, JP2009-261363A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudescherichia vulneris
JCM number: 1688 <-- Y. Kosako 82084 <-- R. Sakazaki 501 <-- D. J. Brenner CDC 875-72 <-- NIH 580.
Source: Human wound, Bethesda, MD, USA [481].
Biochemistry/Physiology: [481].
G+C (mol%): 58.6±0.1 (Tm) [481].
DNA-DNA relatedness: [481].
Phylogeny: 16S rRNA gene (AF530476, X80734).
Taxonomy: [11843].
Genome sequence: BBMZ00000000, UGGL00000000.
 
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Publication(s) using this strain [A08268, A12396, A18463].
Patent publication(s) using this strain [JP2009-261363A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cryptococcus amylolentus
JCM number: 1690 <-- CBS 6039 <-- J. P. van der Walt.
Source: Larval frass of buprestid beetle Enneadesmus forficulus (Coleoptera, Buprestidae) in Dombeya rotundifolia (Malvales, Malvaceae) [286].
Locality: Transvaal, South Africa.
G+C (mol%): 56.1 [349].
Phylogeny: 18S rRNA gene (AB032619) [4714], D1/D2 region of 26S rRNA gene (AF105391) [4751], ITS (AF444306), elongation factor 1 gene (FJ534857).
Genome sequence: AWGJ00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yarrowia deformans
JCM number: 1694 <-- CBS 2071 <-- F. Zach.
Source: Fingernail of 49-year-old woman.
Locality: Austria.
Phylogeny: D1/D2 region of LSU rRNA gene (AB197669, EF405984); ITS & 5.8S rRNA gene (AM279254).
Genome sequence: BCIW00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13868.
 
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Publication(s) using this strain [A18085].
Patent publication(s) using this strain [JP2008-239604A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pichia nakasei
JCM number: 1699 <-- CBS 5141 <-- J. Grinbergs.
Source: Apple must [1287].
Locality: Chile.
Mating type: a [1287].
Phylogeny: D1/D2 region of 26S rRNA gene (U75728) [4520].
Genome sequence: PPIP00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pichia terricola
JCM number: 1709 <-- NRRL YB-4310.
Source: Soil [343].
Locality: South Africa [343].
Biochemistry/Physiology: [343].
Quinone: Q-7 [204].
Serology: [1038].
G+C (mol%): 38.2 [285], 36.6-36.8 [203].
DNA-DNA relatedness: [285].
Phylogeny: D1/D2 region of 26S rRNA gene (U76345) [4520], 18S rRNA gene (AB053245), elongation factor 1 gene (EF552457).
Genome sequence: PPMO00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Issatchenkia orientalis
JCM number: 1710 <-- NRRL Y-5396.
Biosafety level 2.
Source: Fruit juice.
Quinone: Q-7 [204].
Serology: [1038,1136].
G+C (mol%): 40.3±0.12 [285], 38.5 [203].
DNA-DNA relatedness: [285].
Phylogeny: D1/D2 region of 26S rRNA gene (U76347) [4520], ITS & 5.8S rRNA gene (AY939808).
Genome sequence: BBOI00000000, CP028531 (chromosome 1), CP028532 (chromosome 2), CP028533 (chromosome 3), CP028534 (chromosome 4), CP028535 (chromosome 5), PPIQ00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pichia occidentalis
JCM number: 1711 <-- NRRL Y-7552 <-- H. J. Phaff.
Locality: California?, USA.
Quinone: Q-7 [285].
G+C (mol%): 41.1±0.13 [285].
DNA-DNA relatedness: [285].
Phylogeny: D1/D2 region of 26S rRNA gene (U76348) [4520].
Genome sequence: PPIN00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus vaccinostercus
JCM number: 1716 <-- M. Kozaki and S. Okada X-94.
Source: Cow dung [623].
Cell wall: [623].
G+C (mol%): 36.0 [623].
Phylogeny: 16S rRNA [2983], 16S rRNA gene (AJ621556, LC071823).
Genome sequence: AYYY00000000.
 
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Publication(s) using this strain [A04183, B13259].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aspergillus clavatus
JCM number: 1718 <-- CBS 513.65 <-- K. B. Raper <-- C. Thom <-- J. Westerdijk.
Description: [313].
Quinone: Q-10 [4619].
Enzyme electrophoretic profile: [4619].
G+C (mol%): 49 (HPLC) [4619].
DNA-DNA relatedness: [4619].
Other taxonomic data: Typification [313]; Ex-neotype [4397].
Genome sequence: AAKD00000000.
More information: Specimen IMI 15949; Atypical strain [pleomorphic, cf. [313] & ARS (NRRL) Culture Collection online catalog (http://nrrl.ncaur.usda.gov/index.html)].
 
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Patent publication(s) using this strain [JP2008-253271A, JP2012-157360A, JP2014-166191A, US20160304915].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sphingobacterium spiritivorum
JCM number: 1732 <-- NCTC 11388 <-- B. Holmes CL 48/80 <-- Univ. Leeds.
Source: Blood of an 11 year-old female.
Biochemistry/Physiology: [191].
Numerical taxonomy: [506].
Fatty acid: [506].
G+C (mol%): 41.3 (Tm) [191].
DNA-DNA relatedness: [506].
Phylogeny: 16S rRNA gene (LC060920).
Genome sequence: UGYW00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Neosartorya fischeri var. fischeri
JCM number: 1740 <-- CBS 544.65 <-- K. B. Raper <-- C. Wehmer.
Source: Canned apples.
Locality: USA.
Morphology: [313,317,319].
Quinone: Q-10(H2) [2743], Q-10 [3208].
Taxonomy: [309].
Genome sequence: AAKE00000000.
More information: Spore resistance test of high pressure processing and thermal processing [12097,12098,12099].
 
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Publication(s) using this strain [A08178, A17159, A17486, A17487, A18408, A18432, A18479].
Patent publication(s) using this strain [JP2011-193800A, JP2014-183850A, 2016-005447, 2017-006053].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Holtermannia corniformis
JCM number: 1743 <-- J. Sugiyama #83-065 <-- T. Okuda FL847-17.
Source: Rotten stump of a broad leaf tree [299].
Mating type: (A1B1).
Genome sequence: BCIJ00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13855.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Exophiala alcalophila
JCM number: 1751 <-- J. Sugiyama #81-145 <-- K. Horikoshi 11.
Source: Soil [298].
Locality: Wako, Saitama Pref., Japan.
Description: [298].
Morphology: [298].
Biochemistry/Physiology: [4400].
Quinone: Q-10 [2742].
DNA typing: RFLP on 18S rRNA gene and ITS [4399].
Other taxonomic data: Phenogram [4400]; ITS & 5.8S rRNA gene (JF747041), 28S rRNA gene (partial) (AF361051).
Genome sequence: BCHY00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13843.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Peptoniphilus asaccharolyticus
JCM number: 1765 <-- DSM 20463 <-- ATCC 14963 <-- H. C. Douglas UW 228 <-- A. Prévot BAI.
Source: Human clinical specimen [5052].
Biochemistry/Physiology: [2831,5052].
Cell wall: Orn, D-Glu [5052].
Fatty acid: [2831].
G+C (mol%): 32 (Tm) [2831].
DNA-DNA relatedness: [2831].
Phylogeny: 16S rRNA gene (AB640690, AF542228) [8668].
Taxonomy: [2831,5052].
Genome sequence: FWWR00000000.
 
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Publication(s) using this strain [A12296].
Patent publication(s) using this strain [2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Staphylococcus saccharolyticus
JCM number: 1768 <-- DSM 20359 <-- ATCC 14953 <-- W. E. Moore VPI 5661 <-- E. L. Foubert S1 <-- S. A. E. Gunter.
Source: Plasma [2729].
Biochemistry/Physiology: [2729].
Phylogeny: 16S rRNA gene (AB646616, L37602).
Genome sequence: RXWW00000000, UHDZ00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida schatavii
JCM number: 1778 <-- CCY 26-26-5 <-- A. Kocková-Kratochvílová.
Source: Fruiting body of Fomitopsis pinicola [1455].
Locality: Czechoslovakia.
Phylogeny: 18S rRNA gene (AB013537) [4568], D1/D2 region of 26S rRNA gene (U45795) [4293,4520].
Genome sequence: PPIY00000000.
More information: CUG codon usage [4568].
 
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Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida kruisii
JCM number: 1779 <-- CCY 26-19-7 <-- A. Kocková-Kratochvílová.
Source: Fruiting body of a mushroom Boletus purpureus [1455].
Locality: Bohemia.
Quinone: Q-9 [2456,5119].
G+C (mol%): 45.39±0.15 (Tm), 44.20±0.14 (HPLC) [2456].
DNA-DNA relatedness: [2456].
Phylogeny: 18S rRNA gene (AB013543) [4568], D1/D2 region of 26S rRNA gene (U45718) [4293,4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: PPLR00000000.
More information: CUG codon usage [4568].
 
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Positive phenotypes
   Cellobiose   Galactose   Trehalose
 <Growth>in 10% NaCl

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lodderomyces elongisporus
JCM number: 1781 <-- AJ 5470 <-- CBS 2605 <-- E. M. Mrak.
Source: Concentrated orange juice [458].
Locality: California, USA.
Quinone: Q-9 [1149].
Serology: [456].
G+C (mol%): 39.8 [453].
DNA-DNA relatedness: [460].
Phylogeny: D1/D2 region of 26S rRNA gene (U45762) [4293,4520], 18S rRNA gene (X78600), actin gene (AY653541), elongation factor 1 gene (AY653543).
Other taxonomic data: PMR spectrum of polysaccharide [456].
Genome sequence: AAPO00000000.
 
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Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Trehalose
 <Growth>in 10% NaCl

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saturnispora saitoi
JCM number: 1793 <-- K. Kodama LKB 060.
Source: Exudate on stump of Carpinus sp. [461].
Locality: Mie Pref., Japan [461].
Quinone: Q-7 [204].
G+C (mol%): 32.2 [203].
Phylogeny: D1/D2 region of 26S rRNA gene (U94932) [4520], 18S rRNA gene (AB053250), elongation factor 1 gene (EF552442).
Genome sequence: PPIJ00000000.
 
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Positive phenotypes

 <Other test>Gelatin liquefaction

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Saturnispora dispora
JCM number: 1795 <-- AJ 5304 <-- T. Tsuchiya J-6256 <-- CBS 794 <-- M. W. Beijerinck.
Source: Slime flux of oak Quercus sp. (Fagales, Fagaceae) [357].
Locality: The Netherlands?.
Serology: [463].
G+C (mol%): 37.3-37.6 [454].
Phylogeny: D1/D2 region of 26S rRNA gene (U94937) [4520], 18S rRNA gene (AB053251), elongation factor 1 gene (EF552444).
Genome sequence: NHAL00000000, PPND00000000.
More information: Type strain of Debaryomyces disporus.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ambrosiozyma oregonensis
JCM number: 1797 <-- AJ 5233 <-- T. Tsuchiya J-7138.
Source: Mountain stream [357].
Locality: South Santiam River, Oregon, USA.
Quinone: Q-7 [204,354].
Enzyme electrophoretic profile: [2627].
G+C (mol%): 32.7 [281].
Phylogeny: LSU rRNA gene (EU011596) [9726], SSU rRNA gene (EU011676) [9726], elongation factor 1 gene (EU014705) [9726].
Genome sequence: PPKY00000000.
More information: Both glistening- and mold-type colonies may appear on YM agar.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Zygotorulaspora mrakii
JCM number: 1800 <-- AJ 14265 <-- CBS 4218 <-- A. Capriotti.
Source: Silage [344].
Locality: Italy.
G+C (mol%): 48.5 [341].
Phylogeny: D1/D2 region of 26S rRNA gene (U72159) [4520], 18S rRNA gene (AY046239), actin gene (AF527930), elongation factor 1 gene (AF402033).
Genome sequence: PPHZ00000000.
 
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Positive phenotypes

 <Fermentation>Galactose   Raffinose   Sucrose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida oregonensis
JCM number: 1811 <-- AJ 5111 <-- UCD 60-73.
Source: Insect frass in bark of Tsuga heterophylla (Pinales, Pinaceae) [1270].
Locality: Oregon, USA [1270].
Biochemistry/Physiology: [1270].
Quinone: Q-9 [209,5119].
G+C (mol%): 48.0 (Tm) [195], 48.0 (Tm) [453].
Phylogeny: 18S rRNA gene (AB013545) [4568], D1/D2 region of 26S rRNA gene (U44815) [4293,4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: PPLJ00000000.
More information: CUG codon usage [4568].
 
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Publication(s) using this strain [A14161].
Positive phenotypes

 <Assimilation>Hexadecane

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trigonopsis vinaria
JCM number: 1813 <-- AJ 4676 <-- IFO 1092 <-- Y. Ohara O-7.
Source: Grape must [352].
Locality: Japan.
Quinone: Q-9 [5119].
G+C (mol%): 44.1 (Tm) [195].
Phylogeny: 18S rRNA gene (AB018135) [4711], D1/D2 region of 26S rRNA gene (U45833) [4293,4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: PPMK00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Wickerhamia fluorescens
JCM number: 1821 <-- AJ 4285 <-- IFO 1116 <-- NI 7636 <-- M. Soneda SM-5-19-2.
Source: Dung of squirrel [1036].
Locality: Japan.
Quinone: Q-9 [503].
G+C (mol%): 37.6 [355].
Phylogeny: D1/D2 region of 26S rRNA gene (U45719) [4293,4520].
Genome sequence: BCGE00000000.
More information: Killer yeast (kills CBS 138).
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13798.
 
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Publication(s) using this strain [A18085].
Positive phenotypes

 <Fermentation>Galactose   Sucrose
 <Growth>in 10% NaCl

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trigonopsis variabilis
JCM number: 1823 <-- AJ 4876 <-- IFO 0755 <-- NI 7590 <-- CBS 1040 <-- J. Schachner.
Source: Beer [345].
Locality: Germany [345].
Morphology: [345].
Biochemistry/Physiology: [345].
Quinone: Q-9 [1133].
G+C (mol%): 46.1 [355].
Phylogeny: D1/D2 region of 26S rRNA gene (U45827) [4293,4520].
Genome sequence: PPXM00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pichia exigua
JCM number: 1829 <-- UCD 68-979B1.
Source: Insect boring in sitka spruce Picea sitchensis (Pinales, Pinaceae) [396].
Locality: Washington State, USA.
G+C (mol%): 32.5±0.23 [396].
Phylogeny: D1/D2 region of 26S rRNA gene (U76349) [4520], 18S rRNA gene (AB053247), elongation factor 1 gene (EF552461).
Genome sequence: PPIS00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Starmera amethionina
JCM number: 1831 <-- UCD 76-401B.
Source: Necrotic tissues of agria cactus Rathbunia alamosensis (Caryophyllales, Cactaceae) [393].
Locality: Mexico.
G+C (mol%): 33.1±0.14 [393].
Phylogeny: D1/D2 region of 26S rRNA gene (U75424) [4520], 18S rRNA gene (EF550420), elongation factor 1 gene (EF552506).
Genome sequence: PPNC00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pichia heedii
JCM number: 1833 <-- UCD 76-356.
Source: Soft-rot pocket of senita cactus Lophocereus schottii (Caryophyllales, Cactaceae) [402].
Locality: Baja California, Mexico.
G+C (mol%): 32.4±0.20 [402].
Phylogeny: D1/D2 region of 26S rRNA gene (U75733) [4520], 18S rRNA gene (EF550390), elongation factor 1 gene (EF552476).
Genome sequence: PPIR00000000.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Phaffomyces opuntiae
JCM number: 1836 <-- UCD 77-40.
Source: Rot of cereoid cactus Opuntia inermis (Caryophyllales, Cactaceae) [398].
Locality: Yarrawonga, Australia.
G+C (mol%): 33.98±0.04 [398].
Phylogeny: D1/D2 region of 26S rRNA gene (U76203) [4520], 18S rRNA gene (EF550401), elongation factor 1 gene (EF552487, EU014772).
Genome sequence: PPNH00000000.
More information: Killer yeast (kills CBS 138).
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida torresii
JCM number: 1845 <-- AJ 4937 <-- IGC 3022 <-- N. van Uden.
Source: Seawater [1762].
Locality: Torres Strait, Australia.
Quinone: Q-9 [5119].
G+C (mol%): 52.0 [292].
Phylogeny: 18S rRNA gene (AB013540) [4568], D1/D2 region of 26S rRNA gene (U45731) [4293,4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: NXHD00000000.
More information: CUG codon usage [4568].
 
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Positive phenotypes

 <Fermentation>Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aspergillus ellipticus
JCM number: 1860 <-- CBS 707.79 <-- K. B. Raper.
Source: Soil [313,328].
Locality: Costa Rica.
Morphology: [318].
Biochemistry/Physiology: [8107].
Genome sequence: PSSY00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aspergillus heteromorphus
JCM number: 1862 <-- CBS 117.55 <-- A. C. Batista.
Source: Contaminant of Trichophyton sp. culture [313].
Locality: Brazil.
Morphology: [318].
Biochemistry/Physiology: [8107].
Quinone: Q-9 [3208].
Genome sequence: MSFL00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trichoderma longibrachiatum
JCM number: 1883 <-- J. Sugiyama #82-201 <-- ATCC 26113 <-- G. Halliwell <-- CMI 73022 <-- F. C. Wood.
Source: Mushroom compost.
Locality: Wales, UK.
Phylogeny: TEF1 gene (EU401623), CHI18-5 gene (EU401542), CAL1 gene (EU401491) [11235].
Other taxonomic data: ITS (EU401572) [11235].
Genome sequence: BCGH00000000.
More information: Other strain no. (C.P.K. 2062); Used as T. koningii for years, but reidentified as T. longibrachiatum [11235].
Production: Cellobiase, CM-cellulase and C1 and C2 components [438,439].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13801.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Chalara thielavioides
JCM number: 1933 <-- J. Sugiyama #83-052 <-- IFO 9090 <-- J. Sugiyama PCR-8-1-1(1).
Source: Core sample [444].
Locality: Fujioka, Gunma, Japan [444].
Taxonomy: [2881].
Genome sequence: BCGU00000000.
More information: Derived from the type of Chalaropsis thielavioides var. ramosissima [444].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13815.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ulocladium consortiale
JCM number: 1940 <-- J. Sugiyama #83-074 <-- IFO 8823 <-- J. Sugiyama K-1-3.
Source: Goat dung [440].
Locality: Hisper Valley, Karakorum.
Genome sequence: BCGG00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13800.
 
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Petromyces alliaceus
JCM number: 1948 <-- CBS 536.65 <-- K. B. Raper.
Source: Brister beetle.
Morphology: [313,319,567,571].
Quinone: Q-10 [2743,3208].
Genome sequence: SWAS00000000.
 
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Publication(s) using this strain [A08178].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Anaerococcus tetradius
JCM number: 1964 <-- T. Ezaki GIFU 7672.
Source: Vaginal discharge [2831].
Biochemistry/Physiology: [2831,5052].
Cell wall: Lys, D-Glu [5052].
Fatty acid: [2831].
G+C (mol%): 30.0 [2831].
DNA-DNA relatedness: [2831].
Phylogeny: 16S rRNA gene (D14142, LC036320), [5052].
Genome sequence: ACGC00000000.
 
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Publication(s) using this strain [A12071, A14159].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Exiguobacterium acetylicum
JCM number: 1968 <-- ATCC 953 <-- M. Levine 1005.
Source: Creamy waste.
Cell wall: Type A4α (L-Lys-D-Asp) [251,375].
Fatty acid: [1077].
Quinone: MK-7 [1077].
G+C (mol%): 46.6 (Tm) [125].
Phylogeny: 16S rRNA gene (X70313) [3814].
Genome sequence: JNIR00000000.

Publication(s) using this strain [B04107].
Patent publication(s) using this strain [JP2009-142255A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Desemzia incerta
JCM number: 1969 <-- ATCC 8363 <-- E. A. Steinhaus.
Source: Ovaries of the lyreman cicada (Tibicen linnei).
Cell wall: Type A4α, L-Lys-D-Glu [251].
Fatty acid: [1077].
G+C (mol%): 40 (HPLC) [5061].
Phylogeny: 16S rRNA gene (Y17300) [5061].
Taxonomy: [5061].
Genome sequence: FOXW00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium xerosis
JCM number: 1971 <-- ATCC 373 <-- J. G. Fitzgerald.
Source: Ear discharge of a child.
Biochemistry/Physiology: [255,3569].
Cell wall: meso-A2pm direct; arabinogalactan [251,375].
Fatty acid: [3925].
G+C (mol%): 67.3 (Tm) [125], 68.0 (Tm) [3569,5453], 71 (HPLC) [5439], 69.7 (genome sequence) [12227].
Phylogeny: 16S rRNA (M59058), 16S rRNA gene (X81914, X84446) [3956,3961], 5S rRNA (M16204) [2499].
Other taxonomic data: Mycolic acid [3924]; Ribosomal protein [3945].
Taxonomy: [256].
Genome sequence: BCRD00000000, LAYS00000000.

Publication(s) using this strain [A04168, A17518].
Patent publication(s) using this strain [JP2009-126845A, JP2009-183210A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Debaryomyces hansenii
JCM number: 1990 <-- IFO 0083 <-- HUT 7056 <-- CLMR <-- CBS 767 <-- CL.
Biochemistry/Physiology: [1777].
Quinone: Q-9 [1777].
Enzyme electrophoretic profile: [1778].
G+C (mol%): 36.8 [1777].
DNA-DNA relatedness: [1777].
Phylogeny: 18S & 25S rRNA genes [3197], D1/D2 region of 26S rRNA gene (U45808) [4293,4520], actin gene (AY497586), elongation factor 1 gene (AY497658).
Other taxonomic data: PMR spectrum of polysaccharide [1777].
Taxonomy: [1777].
Genome sequence: CR382133 (chromosome A), CR382134 (chromosome B), CR382135 (chromosome C), CR382136 (chromosome D), CR382137 (chromosome E), CR382138 (chromosome F), CR382139 (chromosome G), QGFU00000000.
More information: DNA barcode marker [9081].
 
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Publication(s) using this strain [A12345].
Patent publication(s) using this strain [WO2007/023602, WO2009/008362].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kuraishia capsulata
JCM number: 1991 <-- IAM 12804 <-- IFO 0721 <-- IBL 2531 <-- NRRL Y-1842.
Source: Frass of conifer [1286].
Locality: Lake Wabatongushi, Ontario, Canada.
Quinone: Q-8 [1030].
Enzyme electrophoretic profile: [1030,1285].
Phylogeny: 18S rRNA gene (AB018178) [4712], D1/D2 region of 26S rRNA gene (U75516) [4520], elongation factor 1 gene (EF552494).
Other taxonomic data: PMR spectrum of polysaccharide [1030].
Taxonomy: [1884].
Genome sequence: CBUD000000000.
 
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Positive phenotypes
   Cellobiose   Galactose   Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kuraishia capsulata
JCM number: 1996 <-- IAM 12809 <-- J.-D. Lee <-- MG 117 <-- CBS 1993.
Source: Frass of conifer [1286].
Locality: Lake Wabatongushi, Ontario, Canada.
Quinone: Q-8 [1030].
Enzyme electrophoretic profile: [1030,1285].
Phylogeny: 18S rRNA gene (AB018178) [4712], D1/D2 region of 26S rRNA gene (U75516) [4520], elongation factor 1 gene (EF552494).
Other taxonomic data: PMR spectrum of polysaccharide [1030].
Taxonomy: [1884].
Genome sequence: CBUD000000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ustilago maydis
JCM number: 2005 <-- J. Sugiyama #83-085 <-- M. Kakishima S-303.
Source: Zea mays L.
Locality: Sakura-mura, Niihari-gun, Ibaraki Pref., Japan.
Morphology: [301].
Quinone: Q-10 [2744].
Genome sequence: BCHA00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13820.
 
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Publication(s) using this strain [A05186].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus gallinarum
JCM number: 2011 <-- ATCC 33199 <-- VPI 1294.
Source: Chicken crop.
DNA-DNA relatedness: [1672,3068].
Phylogeny: 16S rRNA gene (AB008208, AB596947, AJ242968, LC071810), 16S rRNA gene & ITS1 (AJ417737).
DNA typing: Amplified rRNA gene restriction analysis [4956], AFLP [4724], RAPD-PCR [4724], ribotype [4925].
Other taxonomic data: SDS-PAGE [4724].
Genome sequence: BALB00000000.
More information: Hemagglutination activity [3586]; Human mucosal adhesion [4689]; Adherence to fibronectin and type IV collagen [6388].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 12472.
 
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Publication(s) using this strain [A05009, A05039, A12004, A12369].
Patent publication(s) using this strain [JP2007-112805A, JP2008-024680A, JP2009-242431A, JP2012-25699A, CN 102978290 A, JP2014-055195A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus johnsonii
JCM number: 2012 <-- ATCC 33200 <-- VPI 7960 <-- D. W. Lambe, Jr.
Source: Human blood.
G+C (mol%): 33.0 (Tm) [3068].
DNA-DNA relatedness: [1672,3068].
Phylogeny: 16S rRNA gene (AJ002515, LC071811).
DNA typing: Amplified rRNA gene restriction analysis [4956], AFLP [4724], RAPD-PCR [4724], ribotype [4925].
Other taxonomic data: SDS-PAGE [4724].
Genome sequence: ACGR00000000.
More information: Human mucosal adhesion [4689].
 
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Publication(s) using this strain [A04059, A04075, A06217, A07011, A09007, A09231, A10219, A10239, A11280, A12363, A13473, A15555, A16535, A17124, A17126].
Patent publication(s) using this strain [JP2007-112805A, JP2008-074768A, JP2008-271931A, JP2008-189572A, JP2008-024680A, JP2009-242431A, JP2009-155221A, JP2009-112214A, WO2012/091081 , CN 102978290 A, JP2014-055195A, WO/2015/004949, 2015-129114, 2016-073314, 2017-226635, 2017-201984, 2017-066086].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rikenella microfusus
JCM number: 2053 <-- C. Kaneuchi Q-1.
Source: Quail cecum [1864].
Biochemistry/Physiology: [1864].
Fatty acid: [2060,3521].
Enzyme electrophoretic profile: [3863].
G+C (mol%): 60.3 (Tm) [1864].
Phylogeny: 16S rRNA gene (AB971798, L16498) [3513].
Genome sequence: ATXW00000000, UGVL00000000.
 
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Publication(s) using this strain [A04177, A07180, A08170].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mitsuokella multacida
JCM number: 2054 <-- T. Mitsuoka A 405-1.
Source: Human feces [069].
Biochemistry/Physiology: Group IIa [069,1878].
Cell wall: [1878].
Fatty acid: [1878,3156,3521].
Enzyme electrophoretic profile: [3863].
G+C (mol%): 57.3 [069], 57.9 [3156].
Phylogeny: 16S rRNA gene (LC036321, X81878) [6176].
Taxonomy: [2061].
Genome sequence: ABWK00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 06653.
 
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Publication(s) using this strain [A04184, A05029, A08278, A12296, A12422].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida albicans
JCM number: 2085 <-- IFO 1594 <-- ATCC 10231 <-- NIHA (C. W. Emmons 3149) <-- Wright clinica.
Biosafety level 2.
Source: Bronchomycosis.
Genome sequence: MUZS00000000.
Application: Sterility test (Japanese Pharmacopoeia, 14 ed.).
 
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Publication(s) using this strain [A04052, A06043, A09183, A13495, A14455, A17068, A17475, A17580].
Patent publication(s) using this strain [JP2009-062312A, JP2011-037786A, JP2011-046651A, JP2011-256114A, JP2013-014554A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Debaryomyces hansenii var. fabryi
JCM number: 2104 <-- AJ 5480 <-- T. Tsuchiya J-8025 <-- IFO 0015 <-- GRIF <-- M. Ota.
Source: Human mycotic lesion.
Locality: Dortmund, Germany.
Quinone: Q-9 [1777].
Enzyme electrophoretic profile: [1778].
G+C (mol%): 36.5 [1777].
DNA-DNA relatedness: [1777].
Phylogeny: D1/D2 region of 26S rRNA gene (U94927) [4520], 18S rRNA gene (AB054269), ITS & 5.8S rRNA gene (AF210326), β-tubulin gene (AM990634).
Other taxonomic data: PMR spectrum of polysaccharide [1777].
Genome sequence: QGFW00000000.
More information: DNA barcode marker [9081].
 
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Publication(s) using this strain [A12345].
Patent publication(s) using this strain [JP2010-063389A].
Positive phenotypes
   Raffinose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus acidophilus
JCM number: 2124 <-- DSM 20242 <-- ATCC.
Source: Vagina.
G+C (mol%): 36.7 [015], 35.0 [584].
Genome sequence: CBLT000000000.

Publication(s) using this strain [A10218, A11022, A11031, A17077, A18005].
Patent publication(s) using this strain [WO2012/091081 , 2016-073314, 2017-201984].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aeromonas sobria
JCM number: 2139 <-- M. Popoff 208.
Biosafety level 2.
Source: Fish [544].
Biochemistry/Physiology: [544].
Numerical taxonomy: [544].
G+C (mol%): 58.8 (Tm) [544].
Phylogeny: 16S rRNA gene (X60412, X74683).
Genome sequence: CDBW00000000.

Publication(s) using this strain [B04214, A09202].
Patent publication(s) using this strain [JP2008-118904A, JP2008-118907A, 2015-164416, AU2015215750].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Bacillus cereus
JCM number: 2152 <-- IAM 12605 <-- NCIB 9373 <-- R. E. Gordon.
Biosafety level 2.
Biochemistry/Physiology: [1693,2949].
Numerical taxonomy: API [2275], [2949].
Cell wall: meso-A2pm [251].
G+C (mol%): 35.6 (UV) [2313], 36.2 (Bd), 35.7 (Tm) [2214].
DNA-DNA relatedness: [1695,2313].
Phylogeny: 16S rRNA gene (AB598737, D16266, X55060, DQ207729) [3047,3574].
Genome sequence: AE016877, AE016878 (plasmid pBClin15) [10252], CP034551, CP034552 (plasmid unnamed), UAPY00000000.
More information: Nutrition [1701].
Production: Restriction endonuclease Bce14579.

Publication(s) using this strain [A04032, A04033, A04080, A04149, A04167, A04188, A04218, A05024, A05027, A05166, A05184, A05195, A05231, A05232, A06010, A06029, A06220, A07006, A07007, A07009, A07271, A08246, A08254, A09005, A09007, A10008, A10063, A10253, A10272, A11021, A11053, A12096, A12326, A12362, A12366, A12417, A14162, A15086, B15089, A15170, A15201, A15536, A15609, A16564, A17004, A17127, A17518, A17580, A18476].
Patent publication(s) using this strain [WO2007/094077, JP2007-312659A, JP2008-173132A, JP2008-173049A, JP2008-079617A, JP2008-067718A, JP2008-187955A, JP2009-126845A, JP2010-029130A,