Strain data

Search for keyword=[bark].
Anaerotignum propionicum
JCM number: 1430 <-- ATCC 25522 <-- L. DS. Smith VPI 5303 <-- M. Poston <-- E. Stadtman <-- H. Barker X2.
Source: Black mud from San Francisco Bay, CA, USA [2730].
Biochemistry/Physiology: [11790].
Cell wall: [1386].
Fatty acid: [11790].
Phylogeny: 16S rRNA gene (AB649276, X77841) [3997].
Other taxonomic data: Protein profile [2652].
Genome sequence: CP014223.
Patent publication(s) using this strain [JP2009-138174A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Priceomyces haplophilus
JCM number: 1635 <-- IAM 12268 <-- IFO 0947 <-- UCD 52-11.
Source: Bark beetle Dendroctonus jeffreyi (Coleoptera, Scolytidae) in Pinus jeffreyi (Pinales, Pinaceae) [1453].
Locality: California, USA.
Quinone: Q-9 [204].
G+C (mol%): 39.0 [203].
Phylogeny: D1/D2 region of 26S rRNA gene (U45770) [4293,4520], 18S rRNA gene (AB054284), ITS & 5.8S rRNA gene (AB054117).
Genome sequence: BCIF00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD13851.
  
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Publication(s) using this strain [A18085].
Positive phenotypes
 <Assimilation>Hexadecane
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida oregonensis
JCM number: 1811 <-- AJ 5111 <-- UCD 60-73.
Source: Insect frass in bark of Tsuga heterophylla (Pinales, Pinaceae) [1270].
Locality: Oregon, USA [1270].
Biochemistry/Physiology: [1270].
Quinone: Q-9 [209,5119].
G+C (mol%): 48.0 (Tm) [195], 48.0 (Tm) [453].
Phylogeny: 18S rRNA gene (AB013545) [4568], D1/D2 region of 26S rRNA gene (U44815) [4293,4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: PPLJ00000000.
More information: CUG codon usage [4568].
  
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Publication(s) using this strain [A14161].
Positive phenotypes
   Hexadecane
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea nigricans
JCM number: 1870 <-- Y. Doi D.5066c.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea muroiana
JCM number: 1871 <-- Y. Doi D.5066(2).
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea nigricans
JCM number: 1874 <-- Y. Doi D.5309a.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trichoderma stramineum
JCM number: 1875 <-- Y. Doi D.5309c.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan [437].
Other taxonomic data: ITS1 (AF011998).
More information: Originally treated as T. hamatum [437], but reidentified as T. stramineum based on ITS, rpb2, and tef1 genes (cf., NBRC online catalogue).
  
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Publication(s) using this strain [A14515, A14516].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trichoderma harzianum
JCM number: 1876 <-- Y. Doi D.5309e.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.
  
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Publication(s) using this strain [A18171].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea muroiana
JCM number: 1877 <-- Y. Doi D.5310b2.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea nigricans
JCM number: 1878 <-- Y. Doi D.5310c.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kuraishia capsulata
JCM number: 1994 <-- IAM 12807 <-- IFO 1769 <-- K. Mikata Og-40ml.
Source: Bark.
Locality: Japan.
Enzyme electrophoretic profile: [1030].
G+C (mol%): 46.6 [1030].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kuraishia molischiana
JCM number: 1997 <-- IAM 12810 <-- CBS 136 <-- ATCC 2516 <-- Tanner Collection <-- H. Zikes.
Source: Used tanbark.
Quinone: Q-8 [1030,5119].
Enzyme electrophoretic profile: [1030].
G+C (mol%): 50.1 [1030].
Phylogeny: D1/D2 region of 26S rRNA gene (U70178); 18S rRNA gene (AB018169) [4712]; ITS & 5.8S rRNA gene (EF568065); elongation factor 1 gene (EU014693).
Other taxonomic data: PMR spectrum of polysaccharide [1030]; Cellular carbohydrate composition [5119].
Taxonomy: [200].
More information: Type strain of Torula molischiana.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hanseniaspora osmophila
JCM number: 2186 <-- IAM 12828 <-- IFO 0631 <-- NCYC 31 <-- A. Klöcker.
Source: Tree bark.
Locality: Copenhagen, Denmark.
Enzyme electrophoretic profile: [1001].
Serology: [1283].
G+C (mol%): 37.8 [1278], 40.5 [1279].
DNA-DNA relatedness: [1279].
More information: Type strain of Pseudosaccharomyces corticis.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yamadazyma tenuis
JCM number: 2313 <-- AJ 5750 <-- T. Tsuchiya J-1191 <-- CBS 2308 <-- E. C. Holst.
Source: Bark beetle.
Locality: USA.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Wickerhamomyces bisporus
JCM number: 3590 <-- AJ 5029 <-- NRRL Y-1482.
Source: Frass from a beetle gallery of Ips typographus (Coleoptera, Scolytidae) beneath the bark of spruce [1286].
Locality: Austria [1286].
Quinone: Q-7 [204].
Enzyme electrophoretic profile: [1002].
G+C (mol%): 37.1 [1843], 36.3 [281].
DNA-DNA relatedness: [1843].
Phylogeny: D1/D2 region of 26S rRNA gene (U74589) [4520], 18S rRNA gene (EF550434), elongation factor 1 gene (EF552520).
Other taxonomic data: PMR spectrum of polysaccharide [1756].
Taxonomy: [1286,1884].
More information: Type strain of Hansenula beckii.
  
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Publication(s) using this strain [A20243].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Schwanniomyces pseudopolymorphus
JCM number: 3652 <-- AJ 5081 <-- CBS 2008 <-- J. Boidin.
Source: Tanning fluid prepared from sweet-chestnut bark.
Locality: Lyon, France.
Quinone: Q-9 [204].
G+C (mol%): 35.7 [1128].
DNA-DNA relatedness: [1128].
Phylogeny: 18S & 25S rRNA genes [3197], D1/D2 region of 26S rRNA gene (U45845) [4293,4520], 18S rRNA gene (AB054273).
  
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Publication(s) using this strain [A22400].
Patent publication(s) using this strain [WO2009/008362].
Positive phenotypes

 <Fermentation>Cellobiose   Maltose   Sucrose
 <Growth>in 10% NaCl
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yamadazyma scolyti
JCM number: 3654 <-- AJ 5073 <-- CBS 4802 <-- H. J. Phaff.
Source: Frass of bark beetle Scolytus ventralis (Coleoptera, Scolytidae) in red fir Abies concolor (Pinales, Pinaceae).
Locality: California, USA.
Mating type: Mates to CBS 4803.
Quinone: Q-9 [204].
Phylogeny: D1/D2 region of 26S rRNA gene (U45788) [4293,4520], 18S rRNA gene (FJ153138), actin gene (EU343958).
Genome sequence: PPMW00000000.
  
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Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Trehalose
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ogataea pini
JCM number: 3655 <-- AJ 5082 <-- CBS 744 <-- C. A. Richards.
Source: Bark beetle Dendroctonus brevicomis (Coleoptera, Scolytidae) in Pinus ponderosa (Pinales, Pinaceae).
Locality: Oregon, USA.
Quinone: Q-7 [204].
G+C (mol%): 44.4 [203].
Phylogeny: D1/D2 region of 26S rRNA gene (U75527,AB440275) [4520,12015], 18S rRNA gene (EU011703), ITS & 5.8S rRNA gene (AB440282) [12015], elongation factor 1 gene (EU014733).
Genome sequence: PPKL00000000.
  
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Publication(s) using this strain [A08173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rhodotorula araucariae
JCM number: 3770 <-- S. Goto YK 161 <-- CBS 6031 <-- J. Grinbergs.
Source: Rotting bark of monkey-puzzle tree Araucaria araucana (Pinales, Araucariaceae).
Locality: Llaima, Chile.
Fatty acid: [3921].
Quinone: Q-10 [1822].
Enzyme electrophoretic profile: [1822].
G+C (mol%): 64.6 [1822].
Phylogeny: D1/D2 region of 26S rRNA gene (AF070427) [4890], ITS (AF444510).
Other taxonomic data: Cellular carbohydrate composition [1822].
  
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Publication(s) using this strain [A15599].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rhodotorula philyla
JCM number: 3933 <-- CBS 6272 <-- J. P. van der Walt.
Source: Tunnels of bark beetle Xyleborus ferrugineus (Coleoptera, Scolytidae) in Harpephyllum caffrum (Sapindales, Anacardiaceae).
Locality: Natal, South Africa.
G+C (mol%): 62.9 [2079,2123].
Phylogeny: D1/D2 region of 26S rRNA gene (AF075471) [4751], ITS (AF444506).
Other taxonomic data: Cellular carbohydrate composition [2616].
Taxonomy: [200,2617].
  
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Publication(s) using this strain [A15599].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Myxozyma melibiosi
JCM number: 5195 <-- M. Yamazaki YK 924 <-- CBS 2667 <-- H. J. Phaff.
Source: Bark beetle Dendroctonus monticolae (Coleoptera, Scolytidae) in Pinus ponderosa (Pinales, Pinaceae).
Locality: California, USA.
Enzyme electrophoretic profile: [1842].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hamamotoa singularis
JCM number: 5356 <-- CBS 5109 <-- H. J. Phaff.
Source: Frass of bark beetle Scolytus tsugae (Coleoptera, Scolytidae) in Tsuga heterophylla (Pinales, Pinaceae) [1270].
Locality: Oregon, USA [1270].
Quinone: Q-10 [1874].
Enzyme electrophoretic profile: [1003].
Phylogeny: D1/D2 region of 26S rRNA gene (AF189996) [4751], 18S rRNA gene (D10819) [3339], 18S rRNA gene (AB021690) [4769], ITS (AF444600).
Other taxonomic data: Cellular carbohydrate composition [1829,2450].
Taxonomy: [1270].
  
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Publication(s) using this strain [A15599].
Patent publication(s) using this strain [WO2012/161108 , 2015-192683, WO/2015/166903].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ascoidea asiatica
JCM number: 7603 <-- S. Goto TH-7 <-- ATCC 24275 <-- CBS 457.69 <-- J. Grinbergs.
Source: Decaying bark of Araucaria araucana.
Locality: Lonquimay, Chile.
Quinone: Q-8 [2627].
Enzyme electrophoretic profile: [2627].
Genome sequence: BCKQ00000000.
More information: Type strain of Ascoidea corymbosa.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD13903.
  
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Publication(s) using this strain [A18085].
Delivery category: Domestic, A or C; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yamadazyma scolyti
JCM number: 8046 <-- S. Goto TH-30 <-- IFO 1280 <-- T. Tsuchiya J-9061 <-- CBS 4802 <-- H. J. Phaff.
Source: Frass of bark beetle Scolytus ventralis (Coleoptera, Scolytidae) in red fir Abies concolor (Pinales, Pinaceae).
Locality: California, USA.
Mating type: Mates to CBS 4803.
Quinone: Q-9 [204].
Phylogeny: D1/D2 region of 26S rRNA gene (U45788) [4293,4520], 18S rRNA gene (FJ153138), actin gene (EU343958).
Genome sequence: PPMW00000000.
  
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Positive phenotypes
   Trehalose
 <Growth>in 10% NaCl
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dictyocatenulata alba
JCM number: 8401 <-- G. Okada OFC 3917.
Source: Lichenized bark of a rotting unidentified tree [9223].
Locality: Fureai-no-mori, Uken-son, Amami-oshima, Kagoshima, Japan [9223].
Morphology: [9223].
Phylogeny: 18S rRNA gene (AB570324) [9223], ITS & 5.8S rRNA gene (AB570314) [9223], 28S rRNA gene (AB570319) [9223].
Taxonomy: [9223].
More information: Introns in 18S rRNA gene [9223].
Publication(s) using this strain [B12099].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Herbidospora cretacea
JCM number: 8549 <-- T. Itoh I-385.
Source: Bark of Japanese red pine (Pinus densiflora), Saitama Pref., Japan [3324].
Biochemistry/Physiology: [3324].
Cell wall: meso-A2pm; a trace of Mad; N-acetyl Mur [3324].
Fatty acid: Type 3c [3324].
Quinone: MK-10(III,IX-H4), MK-10(H2), MK-10(H6) [3324].
Polar lipid: Type PIV [3324].
G+C (mol%): 71 (HPLC) [3324].
DNA-DNA relatedness: [3324].
Genome sequence: JODQ00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma quercus
JCM number: 8809 <-- Y. Yamaoka YCC-178.
Source: Black-stained part of inner bark of Quercus mongolica var. grosseserrata infested with Platypus quercivorus [7507].
Locality: Oshima, Higashikubiki-gun, Niigata, Japan [7507].
More information: Treated once as Ophiostoma piceae; Ophiostoma querci should be read as O. quercus, cf. [5606,7507].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Phaeotremella skinneri
JCM number: 9039 <-- IFO 1872 <-- Y. Fukazawa MCP2015 <-- CBS 5029 <-- H. J. Phaff.
Source: Insect frass beneath the bark of hemlock Tsuga heterophylla (Pinales, Pinaceae) [1270].
Locality: Oregon, USA [1270].
Biochemistry/Physiology: [1270].
G+C (mol%): 53.0 (Bd) [1130].
Phylogeny: D1/D2 region of 26S rRNA gene (AF189835) [4751]; 18S rRNA gene (AB032646) [4714]; ITS & 5.8S rRNA gene (AF444305); 18S & 26S rRNA genes [3843].
Other taxonomic data: Cellular carbohydrate composition [1756].
Genome sequence: BCHT00000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD13840.
  
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Publication(s) using this strain [A18562].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida akabanensis
JCM number: 9115 <-- T. Nakase NK-4.
Source: Insect frass in bark of grape vine Vitis vinifera (Rhamnales, Vitaceae) [3897].
Locality: Akabane, Chigasaki, Kanagawa Pref., Japan [3897].
Morphology: [3897].
Biochemistry/Physiology: [3897].
Quinone: Q-9 [3897,5119].
Serology: [3897].
G+C (mol%): 47.0 (HPLC) [3897].
DNA-DNA relatedness: [3897].
Phylogeny: 18S rRNA gene (AB013514) [4568].
Other taxonomic data: Cellular carbohydrate composition [5119]; PMR spectrum of polysaccharide [3897].
More information: CUG codon usage [4568].
  
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Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Galactose   Sucrose   Trehalose
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida akabanensis
JCM number: 9116 <-- T. Nakase NK-6.
Source: Insect frass in bark of grape vine Vitis vinifera (Rhamnales, Vitaceae) [3897].
Locality: Akabane, Chigasaki, Kanagawa Pref., Japan [3897].
Biochemistry/Physiology: [3897].
Quinone: Q-9 [3897].
Serology: [3897].
G+C (mol%): 47.6 (HPLC) [3897].
DNA-DNA relatedness: [3897].
Other taxonomic data: PMR spectrum of polysaccharide [3897].
  
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Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Galactose   Sucrose   Trehalose
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida akabanensis
JCM number: 9117 <-- T. Nakase NK-9.
Source: Insect frass in bark of grape vine Vitis vinifera (Rhamnales, Vitaceae) [3897].
Locality: Akabane, Chigasaki, Kanagawa Pref., Japan [3897].
Biochemistry/Physiology: [3897].
Quinone: Q-9 [3897].
Serology: [3897].
G+C (mol%): 48.2 (HPLC) [3897].
DNA-DNA relatedness: [3897].
  
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Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Galactose   Sucrose   Trehalose
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma japonicum
JCM number: 9366 <-- Y. Yamaoka YCC-99.
Source: Egg gallery wall (bark) of Ips typographus japonicus Niijima in Picea jezoensis (Sieb. & Zucc.) Carr..
Locality: Tokyo University forest in Hokkaido, Yamabe, Furano, Hokkaido, Japan.
Description: [4285].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Prototheca zopfii
JCM number: 9400 <-- T. Nakase <-- T. Hatano KO-45.
Source: Bark of a cherry tree [3694].
Morphology: [3694].
Biochemistry/Physiology: [3694].
Quinone: Q-8 [3694].
G+C (mol%): 64.6 [3694].
Other taxonomic data: Cellular neutral sugar composition [3694].
  
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Publication(s) using this strain [A04180, A13462, A13502, A14438].
Patent publication(s) using this strain [JP2008-148663A, JP2009-112245A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pestalotiopsis sp.
JCM number: 9686 <-- F. Sugawara KR22-2A3.
Source: Bark of Taxus brevifolia.
Locality: Bozeman, MT, USA [4273].
More information: Review on the secondary metabolites of Pestalotiopsis [8415].
Production: Isoprenoid [4273].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kionochaeta spissa
JCM number: 9817 <-- G. Okada OFC 5010.
Source: Wet decaying bark of an unidentified tree.
Locality: Sumiyou, Amami Island, Kagoshima Pref., Japan.
Description: [4350].
Phylogeny: 18S rRNA gene (AB003789) [4350].
More information: Dried culture (TNS-F-181992).
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yamadazyma tenuis
JCM number: 9827 <-- CBS 615 <-- E. C. Holst.
Source: Bark beetle.
Locality: USA.
Quinone: Q-9 [5119].
Phylogeny: D1/D2 region of 26S rRNA gene (U45774) [4293,4520], 18S rRNA gene (AB013516) [4568], ITS & 5.8S rRNA gene (HQ283371).
Other taxonomic data: Cellular carbohydrate composition [5119].
Genome sequence: AEIM00000000.
More information: CUG codon usage [4568].
  
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Positive phenotypes
   Galactose   Trehalose
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nakazawaea ernobii
JCM number: 9848 <-- IFO 0654 <-- CBS 1737 <-- W. Schwartz.
Source: Intracellular symbiont of Ernobius mollis (bark beetle) [288].
Locality: Ireland.
Morphology: [288].
Biochemistry/Physiology: [288].
Quinone: Q-8 [209,2798,5119].
G+C (mol%): 36.1 (Tm) [292].
Phylogeny: 18S rRNA gene (AB018161) [4712], D1/D2 region of 26S rRNA gene (U70241) [4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
Taxonomy: [200].
  
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Positive phenotypes
   Cellobiose
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida nemodendra
JCM number: 9855 <-- IFO 10299 <-- CBS 6280 <-- J. P. van der Walt.
Source: Gallery of bark beetle Xyleborus aemulus (pin-borer beetle, Coleoptera, Scolytidae) in Rapanea melanophloeos (Ericales, Primulaceae) [3915].
Locality: Blue Lilies, Cape Province, South Africa [3915].
Quinone: Q-7 [5119].
G+C (mol%): 42.4 (Tm), 43.2 (Tm).
Phylogeny: D1/D2 region of 26S rRNA gene (U70246) [4520], 18S rRNA gene (AB054546), elongation factor 1 gene (EU014739).
Other taxonomic data: Cellular carbohydrate composition [5119].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida nitratophila
JCM number: 9856 <-- IFO 10300 <-- CBS 2027 <-- UCD 52-85 <-- H. J. Phaff.
Source: Bark beetle Dendroctonus monticolae (Coleoptera, Scolytidae) in Pinus ponderosa (Pnales, Pinaceae).
Locality: California, USA.
Quinone: Q-7 [5119].
G+C (mol%): 36.6 (Tm).
Phylogeny: D1/D2 region of 26S rRNA gene (U70180) [4520], 18S rRNA gene (AB054548), elongation factor 1 gene (EU014715).
Other taxonomic data: Cellular carbohydrate composition [5119].
  
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Positive phenotypes
   Galactose   Trehalose
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kionochaeta ivoriensis
JCM number: 9876 <-- CBS 374.76 <-- A. Rambelli and D. Lunghini.
Source: Dead bark.
Locality: Lamto area near the Bandama River, Cote d'Ivoire [4071].
Description: [4071].
Morphology: [4071].
Phylogeny: 18S rRNA gene (AB003787) [4350].
Taxonomy: [4350].
More information: Ex-type strain of Chaetopsina ivoriensis.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Eubacterium maltosivorans
JCM number: 9976 <-- STAFF 1028 <-- ATCC 10825 <-- H. A. Barker 32 of group A2.
Source: Intestinal contents of white rats [10811].
Biochemistry/Physiology: [10811].
DNA-DNA relatedness: [14706].
Phylogeny: 16S rRNA gene (LC145549), phylogenomic analysis [14706].
Genome sequence: CP132138 [14706].
More information: Cataloged as Eubacterium limosum until Nov. 2015.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Gordonia hydrophobica
JCM number: 10086 <-- CIP 104672 <-- DSM 44015 <-- B. Bendinger 1610/1b.
Source: Tree bark compost of biofilter for waste gas purification of animal rendering plant emissions [3788].
Biochemistry/Physiology: [3788,4234].
Cell wall: meso-A2pm (type A1γ); N-glycolyl Mur; Ara, Gal [3788].
Fatty acid: [3788,4209,4234].
Quinone: MK-9(H2) [3788].
Polar lipid: DPG, PI, PIM, PE [3788].
G+C (mol%): 69 (HPLC) [3788], 67.5 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (X87340) [3788], gyrB (AB438186), secA1 (AB437914) [8445].
Other taxonomic data: Mycolic acid [3788,4210,4234].
Genome sequence: BCWU00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinomadura nitritigenes
JCM number: 10104 <-- DSM 44137 <-- A. Lipski L46.
Source: Biofilter containing tree bark compost as the packing material [4214].
Biochemistry/Physiology: [4214].
Cell wall: meso-A2pm; Mad, Gal [4214].
Fatty acid: [4214].
Quinone: MK-9(H6), MK-9(H8), MK-9(H4) [4214].
Polar lipid: DPG, PI, PIM [4214].
G+C (mol%): 74 (HPLC) [4214].
Phylogeny: 16S rRNA gene (AB364595, AJ293708, AY035999) [5400].
Genome sequence: BAAAGM010000000, JAGEOK00000000.
Publication(s) using this strain [B16437, A18099].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Gordonia hirsuta
JCM number: 10105 <-- DSM 44140 <-- S. Klatte K718a.
Source: Wet-ground filter material (fiber bark compost) from a large scale biofilter [4234].
Biochemistry/Physiology: [4234].
Cell wall: meso-A2pm; Ara, Gal (chemotype IV); N-glycolyl Mur [4234].
Fatty acid: [4234].
Quinone: MK-9(H2) [4234].
Polar lipid: DPG, PI, PIM, PE [4234].
G+C (mol%): 69 (HPLC) [4234].
Phylogeny: 16S rRNA gene (X93485) [4234], gyrB (AB438185), secA1 (AB437913) [8445].
Other taxonomic data: Mycolic acid [4234].
Genome sequence: ATVK00000000, BANT00000000.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Niesslia exilis
JCM number: 10162 <-- CBS 357.70 <-- W. Gams.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark of Picea abies.
Locality: Kaltenhofen, Kr. Eckernförde, Germany.
Description: [4281].
Morphology: [4281].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudonocardia asaccharolytica
JCM number: 10410 <-- A. Lipski 580.
Source: Tree-bark compost from biofilters [4334].
Biochemistry/Physiology: [4334].
Cell wall: meso-A2pm; N-acetyl Mur; Ara, Gal [4334].
Fatty acid: [4334].
Quinone: MK-8(H4) [4334].
Polar lipid: Type PII (DPG, PME, PG, PI, PIM, OH-PE) [4334].
G+C (mol%): 71.8 (genome sequence) [12227].
DNA-DNA relatedness: [4334].
Phylogeny: 16S rRNA gene (Y08536) [4334], gyrB (EU722564).
Genome sequence: AUII00000000, BJVI00000000.
More information: Degrades dimethyl disulfide [4334].
Publication(s) using this strain [A16082].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudonocardia sulfidoxydans
JCM number: 10411 <-- A. Lipski 592.
Source: Tree-bark compost from biofilters [4334].
Biochemistry/Physiology: [4334].
Cell wall: meso-A2pm; N-acetyl Mur; Ara, Gal [4334].
Fatty acid: [4334].
Quinone: MK-8(H4) [4334].
Polar lipid: Type PII (DPG, PME, PE, PG, PI, PIM, OH-PE) [4334].
DNA-DNA relatedness: [4334].
Phylogeny: 16S rRNA gene (Y08537) [4334].
Genome sequence: BJVJ00000000.
More information: Degrades dimethyl sulfide and dimethyl disulfide [4334].
Publication(s) using this strain [A16082, A17203].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clonostachys compactiuscula
JCM number: 10746 <-- Tanabe Seiyaku Co. (T. Okuda, TC 1292).
Source: Bark [5128].
Locality: Mt. Sekido, Kajima, Kajima-gun, Ishikawa, Japan [5128].
Description: [5128].
Morphology: [5128].
Production: Cytotoxic antibiotic, TMC-151 [5128].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma subalpinum
JCM number: 11716 <-- Y. Yamaoka YCC-408.
Source: Cryphalus montanus in Abies mariesii [11531].
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan [5699,11531].
Mating type: Mixed [11531].
Phylogeny: EF-1α gene (LC090750) [11531].
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma subalpinum
JCM number: 11717 <-- Y. Yamaoka YCC-410.
Source: Polygraphus proximus in Abies mariesii.
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma subalpinum
JCM number: 11718 <-- Y. Yamaoka YCC-411.
Source: Sapwood of Abies mariesii under galleries of Cryphalus montanus.
Locality: West of Mt. Ohmanako, Nikko, Tochigi, Japan [11531] (cited as JCM 11717).
Mating type: Mixed [11531] (cited as JCM 11717).
Phylogeny: EF-1α gene (LC090751) [11531] (cited as JCM 11717).
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma sp.
JCM number: 11719 <-- Y. Yamaoka YCC-412.
Source: Polygraphus proximus in Abies mariesii.
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma sp.
JCM number: 11720 <-- Y. Yamaoka YCC-414.
Source: Egg gallery of Polygraphus proximus in Abies mariesii.
Locality: West of Mt. Ohmanako, Nikko, Tochigi Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia europhioides
JCM number: 11721 <-- Y. Yamaoka YCC-417.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173, C16539].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia europhioides
JCM number: 11722 <-- Y. Yamaoka YCC-419.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: West of Mt. Ohmanako, Nikko, Tochigi, Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia davidsonii
JCM number: 11723 <-- Y. Yamaoka YCC-420.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
open link in new window
Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia davidsonii
JCM number: 11724 <-- Y. Yamaoka YCC-423.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: West of Mt. Ohmanako, Nikko, Tochigi, Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia abieticola
JCM number: 11725 <-- Y. Yamaoka YCC-424.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: North of Yusengatake, Nikko, border between Tochigi and Gunma, Japan.
Description: [5780].
Morphology: [5780].
Phylogeny: ITS (AB506675) [11240].
Taxonomy: New combination [11240].
More information: Ex-holotype (TNS-F-6688) [5780]; Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173, C04211].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia abieticola
JCM number: 11726 <-- Y. Yamaoka YCC-427.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: West of Mt. Ohmanako, Nikko, Tochigi, Japan.
Description: [5780].
More information: Pathogenicity associated with bark beetles and Abies species [5699].
  
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Publication(s) using this strain [C04173, C04211].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma quercus
JCM number: 12451 <-- J.-W. Huang OPH-106.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark and sapwood of diseased Chinese fir (Cunninghamia lanceolata) var. lanceolata.
Locality: Dongshi Town, Taichung County, Taiwan.
Morphology: [5605].
Biochemistry/Physiology: [5605].
Other taxonomic data: ITS [5605].
More information: With Pesotum and Sporothrix synanamorphs [5605]; Mating experiment [5605]; Scientific name [5606].
Publication(s) using this strain [A23451].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma quercus
JCM number: 12452 <-- J.-W. Huang OPH-110.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark and sapwood of diseased Chinese fir (Cunninghamia lanceolata) var. lanceolata.
Locality: Puli Town, Nantou County, Taiwan.
Morphology: [5605].
Biochemistry/Physiology: [5605].
Cell wall: Cellulose [5605].
More information: With Pesotum and Sporothrix synanamorphs [5605]; Mating experiment [5605]; Scientific name [5606].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma breviusculum
JCM number: 12500 <-- Y. Yamaoka YCC-519.
Source: Bark beetle Dryocoetes baicalicus Reitter in Larix kaempferi (Lamb.) Carr..
Locality: Yumihari Pass, Nikko, Tochigi, Japan.
Description: [7507,11531].
Mating type: A [11531].
Phylogeny: ITS & 5.8S rRNA gene (AB200421) [7507], β-tubulin gene (AB200427, HM031516) [7507,8461].
More information: Single ascospore isolate from YCC-494 (JCM 11980) [7507].
  
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Publication(s) using this strain [C06245, A10235].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma breviusculum
JCM number: 12501 <-- Y. Yamaoka YCC-522.
Source: Bark beetle Dryocoetes baicalicus Reitter in Larix kaempferi (Lamb.) Carr..
Locality: Yumihari Pass, Nikko, Tochigi, Japan.
Description: [7507].
Mating type: B [11531].
Phylogeny: ITS & 5.8S rRNA gene (AB200423) [7507], β-tubulin gene (HM031517) [8461].
More information: Single ascospore isolate from YCC-494 (JCM 11980) [7507].
  
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Publication(s) using this strain [C06245, A10235].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma floccosum
JCM number: 12502 <-- Y. Yamaoka YCC-523.
Source: Bark beetle Ips cembrae Heer in Larix kaempferi (Lamb.) Carr..
Locality: Utsunomiya University Forests, Nikko, Tochigi, Japan.
More information: Single ascospore isolate from YCC-486 (JCM 11978) [7507]; Identified by Adnan Uzunovic.
  
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Publication(s) using this strain [C06245].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma floccosum
JCM number: 12503 <-- Y. Yamaoka YCC-526.
Source: Bark beetle Ips cembrae Heer in Larix kaempferi (Lamb.) Carr..
Locality: Utsunomiya University Forests, Nikko, Tochigi, Japan.
More information: Single ascospore isolate from YCC-486 (JCM 11978) [7507]; Identified by Adnan Uzunovic.
  
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Publication(s) using this strain [C06245].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cystobacter velatus
JCM number: 12628 <-- DSM 14718 <-- H. Reichenbach Cb v34.

Source: Soil with bark and wood, India.
Phylogeny: 16S rRNA gene (DQ768115).
  
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Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Melittangium boletus
JCM number: 12633 <-- DSM 14713 <-- H. Reichenbach Me b8.

Source: Soil with raw humus, Rotting wood, bark and white marl from swampy region, India.
Phylogeny: 16S rRNA gene (AJ233908, DQ768125) [7495].
Taxonomy: [6279,9750].
Genome sequence: CP022163.
More information: Designation as the type strain [9750].
Publication(s) using this strain [C13366].
Delivery category: Domestic, A or C; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium tuberculostearicum
JCM number: 13389 <-- CCUG 45418 <-- W. L. Barksdale strain Medalle X <-- C. Reich.
Biosafety level 2.
Source: Human bone marrow, the Philippines [6114].
Biochemistry/Physiology: [6114].
Fatty acid: [6114].
Phylogeny: 16S rRNA gene (AJ438050) [6114].
Other taxonomic data: Whole-cell protein profile [6114].
Genome sequence: JACBZL000000000.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD07703.
Patent publication(s) using this strain [JP2011-167082A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aegerita candida
JCM number: 13419 <-- G. Okada OFC 5318.
Source: Wet hard wood without bark.
Locality: Taraigoya-sawa research plot No. T4, Mt. Tanzawa, Susugatani, Kiyokawa-mura, Aiko-gun, Kanagawa, Japan (35°26'46.5" N, 139°11'58.5" E).
More information: Identified by G. Okada.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudaegerita corticalis
JCM number: 13420 <-- G. Okada OFC 5319.
Source: Wet soft wood without bark.
Locality: Taraigoya-sawa research plot No. T4, Mt. Tanzawa, Susugatani, Kiyokawa-mura, Aiko-gun, Kanagawa, Japan (35°26'46.5" N, 139°11'58.5" E).
More information: Identified by G. Okada.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Petrakia echinata
JCM number: 14130 <-- CBS 112395 <-- T. N. Sieber.
Source: Bark of twigs of Fagus sylvatica (Fagaceae).
Locality: Camporgiano, Italy.
More information: Isolated from endophytic mycelium; Identified by T. N. Sieber.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Massarina rubi
JCM number: 14146 <-- CBS 109941 <-- A. Aptroot 51403.
Source: Bark of Juglans regia (Juglandaceae).
Locality: Fort Rhijnauwen, Utrecht, the Netherlands.
More information: Identified by A. Aptroot.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium aceticum
JCM number: 15732 <-- DSM 1496 <-- M. Braun <-- H. A. Barker <-- K. T. Wieringa.
Source: Mud.
Biochemistry/Physiology: [7484].
G+C (mol%): 33 [7484].
Phylogeny: 16S rRNA gene (AB910752, Y18183).
Genome sequence: CP009687, CP009688 (plasmid CACET_5p), JYHU00000000.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lachancea nothofagi
JCM number: 16504 <-- D. Libkind CRUB 1792.
Source: Bark of Nothofagus antarctica (Fagaceae) [8705].
Locality: Native forest in Guillelmo Lake area, Nahuel Huapi National Park, Argentina [8705].
Description: [8705].
Morphology: [8705].
Biochemistry/Physiology: [8705].
Phylogeny: D1/D2 region of 26S rRNA gene (FJ707476) [8705].
Taxonomy: [8705].
More information: Growth at 30°C is negative [8705].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinomycetospora corticicola
JCM number: 17981 <-- KACC 14253 <-- NBRC 103689 <-- T. Tamura 014-5.
Source: Bark of a mangrove tree, Kandelia candel, Iriomote Island, Okinawa Pref., Japan [8792].
Biochemistry/Physiology: [8792].
Cell wall: meso-A2pm, D- & L-Ala, D-Glu; Ara, Gal, Glc [8792].
Fatty acid: i-C16:0, 10Me-C16:0 [8792].
Quinone: MK-8(H4) [8792].
Polar lipid: PE, PC, DPG (type PIII) [8792].
G+C (mol%): 74 (HPLC) [8792].
DNA-DNA relatedness: [8792].
Phylogeny: 16S rRNA gene (AB514513) [8792].
Genome sequence: BAABHP010000000, JACCBN000000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acinetobacter puyangensis
JCM number: 18011 <-- Y. Li BQ4-1.
Source: Healthy part of symptomatic bark of Populus x euramericana canker (1 cm from a lesion margin) collected from Puyang City, Henan Province, China, during July 2010 [9600].
Biochemistry/Physiology: [9600].
Chemotaxonomy: [9600].
DNA-DNA relatedness: [9600].
Phylogeny: 16S rRNA gene (JN664255) [9600], gyrB (JQ411219) [9600], rpoB (JX499272) [9600].
Genome sequence: BAABHT010000000, OANT000000000.
Publication(s) using this strain [B13282, B17054].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces barkulensis
JCM number: 18754 <-- V. Raina RC 1831.
Source: Sediment of a fish dumping yard at Barkul Village near Chilika Lake, Odisha, India [9958].
Biochemistry/Physiology: [9958].
Cell wall: LL-A2pm (chemotype I); Glc, Rib [9958].
Fatty acid: a-C15:0, i-C16:0, n-C16:0, i-C14:0 [9958].
Quinone: MK-9(H6), MK-9(H8), MK-9(H4) [9958].
Polar lipid: DPG, PE, PI, PIM, PL [9958].
G+C (mol%): 66.2 (Tm) [9958].
DNA-DNA relatedness: [9958].
Phylogeny: 16S rRNA gene (JQ862602) [9958].
Genome sequence: PDKQ00000000, PGSG00000000.
Publication(s) using this strain [C14231, B16452].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sporolactobacillus shoreae
JCM number: 19541 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; BK92.
Source: White-Meranti (Shorea talura Roxb.) tree barks, Rayong Province, Thailand [10440].
Biochemistry/Physiology: [10440].
Cell wall: [10440].
Fatty acid: [10440].
Quinone: MK-7 [10440].
G+C (mol%): 46.6 (HPLC) [10440].
DNA-DNA relatedness: [10440].
Phylogeny: 16S rRNA gene (AB911245, LC638722), gyrB (AB917308) [10440].
Genome sequence: SRJD00000000.
  
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Publication(s) using this strain [B15221].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sporolactobacillus spathodeae
JCM number: 19542 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; BK117-1.
Source: African Tulip (Spathodea campanulata P. Beauv.) tree barks, Bangkok, Thailand [10440].
Biochemistry/Physiology: [10440].
Cell wall: [10440].
Fatty acid: [10440].
Quinone: MK-7 [10440].
G+C (mol%): 47.4 (HPLC) [10440].
DNA-DNA relatedness: [10440].
Phylogeny: 16S rRNA gene (AB911246, LC638723), gyrB (AB917309) [10440].
Genome sequence: JAFBEV000000000.
  
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Publication(s) using this strain [B15221].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trichoderma reesei
JCM number: 22988 <-- IAM 14456 <-- USDA, GJS 86-404.
Source: Bark (cf., ATCC catalogue).
Locality: French Guiana [6977,13734].
Enzyme electrophoretic profile: Isozyme polymorphisms [6977].
Phylogeny: PCR-fingerprints [13734]; TEF (GQ354342), CAL (GQ354276), LAS (GQ354308) [13735].
More information: Originally treated as Hypocrea schweinitzii [6977].
Production: extracellular cellulases [13735].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trichoderma aureoviride
JCM number: 23184 <-- IAM 14953 <-- G. Oros; Plant Prot. Inst., Hungarian Acad. of Sci., Hungary.
Source: Oak bark.
Locality: Eger, Hungary.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30256 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 06035.
Source: Bark of Pinus densiflora [11080].
Locality: Lake Kanayama, Utsutsumi, Kamogawa, Chiba, Japan [11080].
Morphology: [11080].
More information: Herbarium specimen KPM-NC0023581 [11080].
  
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Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30257 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 10092.
Source: Bark of Abies firma [11080].
Locality: Rokudoyama Park, Noyamakita, Musashimurayama, Tokyo, Japan [11080].
More information: Herbarium specimen KPM-NC0023582 [11080].
  
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Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30258 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 11132.
Source: Bark of Abies firma [11080].
Locality: Mt. Tsukuba, Tsukuba, Ibaraki, Japan [11080].
More information: Herbarium specimen KPM-NC0023583 [11080].
  
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Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30259 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 13158.
Source: Bark of Pinus thunbergii [11080].
Locality: Fureai-hiroba, Mikura-jima, Tokyo, Japan [11080].
More information: Herbarium specimen KPM-NC0023585 [11080]; Producing sectors in colony.
  
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Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30260 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 13488.
Source: Bark of Pinus densiflora [11080].
Locality: Central Park, Tsuzuki, Yokohama, Kanagawa, Japan [11080].
More information: Herbarium specimen KPM-NC0023586 [11080].
  
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Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Symbioplanes lichenis
JCM number: 30485 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; LDG1-22.
Source: Lichen from tree bark, Thailand [10916].
Biochemistry/Physiology: [10916].
Cell wall: meso-A2pm; Rib, Glc, Man, Ara, Xyl [10916].
Fatty acid: a-C15:0, i-C16:0 [10916].
Quinone: MK-9(H4) [10916].
Polar lipid: DPG, PE, PI, PIMs, PG [10916].
G+C (mol%): 73.6 (HPLC) [10916].
DNA-DNA relatedness: [10916].
Phylogeny: 16S rRNA gene (LC033899) [10916]; Concatenated 324 single-copy orthologous genes [14541].
Other taxonomic data: Average amino acid identity, average nucleotide identity [14541].
Genome sequence: JAUZQD000000000.
Publication(s) using this strain [B16288].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dictyocatenulata alba
JCM number: 31295 <-- G. Okada; RIKEN BRC-JCM, Japan; OFC 5367.
Source: Peeling bark of living big Zelkova serrata (coll. on 6 Nov 2012).
Locality: Kuragafuchi, Shioda, Ueda, Nagano, Japan.
More information: Identified by G. Okada.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dictyocatenulata alba
JCM number: 31297 <-- G. Okada; RIKEN BRC-JCM, Japan; OFC 5369.
Source: Peeling bark of living big Zelkova serrata (coll. on 14 Nov 2015).
Locality: Kuragafuchi, Shioda, Ueda, Nagano, Japan.
More information: Identified by G. Okada.
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dipodascus aggregatus
JCM number: 31687 <-- NRRL Y-17564 <-- CBS 175.53 <-- H. Francke-Grosmann.
Source: Pupal chamber of bark beetle Ips acuminatus (Coleoptera, Scolytidae) in scots pine Pinus sylvestris (Pinales, Pinaceae).
Locality: West Germany.
Phylogeny: D1/D2 region of LSU rRNA gene (U40120), SSU rRNA gene (AB000645), ITS & 5.8S rRNA gene (AY788294).
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dipodascus australiensis
JCM number: 31688 <-- NRRL Y-17565 <-- CBS 625.74 <-- J. S. F. Barker; Univ. of Sydney, Australia.
Source: Rotting cladodes of cactus Opuntia inermis (Caryophyllales, Cactaceae).
Locality: Australia.
Phylogeny: D1/D2 region of LSU rRNA gene (U40100), SSU rRNA gene (AB000643).
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microlunatus endophyticus
JCM number: 31774 <-- CGMCC 4.7306 <-- L. Tuo; Inst. of Med. Biotechnol., Chin. Acad. Med. Sci. & Peking Union Med. Coll., China; S3Af-1.
Source: Surface-sterilized bark of Bruguiera sexangula from Dongzhaigang National Nature Reserve, Hainan, China [11209].
Biochemistry/Physiology: [11209].
Cell wall: LL-A2pm [11209].
Fatty acid: i-C16:0, a-C17:0, a-C15:0 [11209].
Quinone: MK-9(H6), MK-9(H4) [11209].
Polar lipid: PG, DPG, GL, PLs [11209].
G+C (mol%): 67.1 (HPLC) [11209].
DNA-DNA relatedness: [11209].
Phylogeny: 16S rRNA gene (KT749873) [11209].
Genome sequence: BMMZ00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nakamurella endophytica
JCM number: 31778 <-- CGMCC 4.7308 <-- L. Tuo; Inst. of Med. Biotechnol., Chin. Acad. Med. Sci. & Peking Union Med. Coll., China; 2Q3S-4-2.
Source: Surface-sterilized bark of Kandelia candel from Cotai Ecological Zones, Macao, China [11213].
Biochemistry/Physiology: [11213].
Cell wall: meso-A2pm [11213].
Fatty acid: i-C16:0, a-C15:0, a-C17:0, n-C16:0 [11213].
Quinone: MK-8(H4) [11213].
Polar lipid: DPG, PE, APLs, PI [11213].
G+C (mol%): 67.8 (HPLC) [11213].
Phylogeny: 16S rRNA gene (KT971019) [11213].
Genome sequence: BMNA00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Phycicoccus endophyticus
JCM number: 31784 <-- CGMCC 4.7300 <-- S.-W. Liu; Inst. of Med. Biotechnol., Chin. Acad. Med. Sci. & Peking Union Med. Coll., China; IP6SC6.
Source: Surface-sterilized bark of Bruguiera gymnorhiza from Zhanjiang Mangrove Forest National Nature Reserve, Guangdong, China [11211].
Biochemistry/Physiology: [11211].
Cell wall: meso-A2pm; Gal, Glc [11211].
Fatty acid: i-C15:0, a-C15:0, a-C17:0, i-C16:0 [11211].
Quinone: MK-8(H4) [11211].
Polar lipid: DPG, PI [11211].
G+C (mol%): 72.5 (HPLC) [11211].
Phylogeny: 16S rRNA gene (KT327645) [11211].
Genome sequence: CP060712.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nesterenkonia populi
JCM number: 31979 <-- DSM 27959 <-- C.-H. Sun; Inst. of Med. Biotechnol., Chin. Acad. Med. Sci. & Peking Union Med. Coll., China; GP10-3.
Source: Bark of Populus euphratica on the southern edge of the Taklimakan Desert, Xinjiang, China [11494].
Biochemistry/Physiology: [11494].
Cell wall: Type A4α (L-Lys-L-Glu) [11494].
Fatty acid: a-C17:0, a-C15:0, i-C16:0 [11494].
Quinone: MK-8, MK-7 [11494].
Polar lipid: DPG, PG, PGL, PC, PI, GL, PL [11494].
G+C (mol%): 67.4 (HPLC) [11494].
Phylogeny: 16S rRNA gene (KP057085) [11494].
Genome sequence: VOIL00000000.
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudomonas mangiferae
JCM number: 32061 <-- TBRC 7080 <-- N. Srisuk; DMKU BBB3-04.
Source: Mango tree bark in Bangkachoa, Samutprakan Province, Thailand [12752].
Morphology: [12752].
Biochemistry/Physiology: [12752].
Chemotaxonomy: [12752].
Phylogeny: 16S rRNA gene (KY290607), gyrB (MK142922), rpoB (MK173057), rpoD (MK191850) [12752].
Taxonomy: Average nucleotide identity, genome-to-genome distances [12752].
Genome sequence: VJOY00000000 [12752].
Publication(s) using this strain [C19327].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lactobacillus corticis
JCM number: 32597 <-- M. Tohno; NARO, Japan; B40.
Source: Hardwood bark used as a compost ingredient, which had been collected from a local compost factory in Utsunomiya, Tochigi, Japan [13418].
Biochemistry/Physiology: [13418].
Cell wall: A4α (L-Lys-D-Asp) [13418].
Fatty acid: [13418].
G+C (mol%): 42.2 (genome sequence).
Phylogeny: 16S RNA gene (LC383842).
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [13418].
Genome sequence: BMAY00000000 [13418].
  
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Publication(s) using this strain [B21310].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Unidentified bacterium
JCM number: 32665 <-- H. Aoyagi; Fac. of Life & Environ. Sci., Univ. of Tsukuba, Japan; IAD-21.

Source: Bark sample from mature Acer palmatum in Atami, Shizuoka, Japan [12886].
Phylogeny: 16S rRNA gene (LC361411) [12886].
More information: It belongs to the candidate division FBP [12886].
  
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Publication(s) using this strain [C19500].
Delivery category: Domestic, B; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paractinoplanes lichenicola
JCM number: 33066 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; LDG1-01.
Source: Lichen Parmotrema sp., growing on the bark of Buchanania latifolia Roxb in Mahasarakham Province, Thailand [13439].
Morphology: [13439].
Biochemistry/Physiology: [13439].
Cell wall: meso-A2pm [13439].
Fatty acid: [13439].
Quinone: MK-9(H4) [13439].
Polar lipid: DPG, PG, PE, PI, PLs [13439].
G+C (mol%): 70.9 (genome sequence) [13439].
Phylogeny: 16S rRNA gene (LC599584), genome BLAST distance phylogeny [13439]; Concatenated 324 single-copy orthologous genes [14541].
Other taxonomic data: Average nucleotide identity [13439,14541]; Genome-to-genome distances [13439]; Average amino acid identity [14541].
Genome sequence: JAENHO000000000 [13439].
  
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Publication(s) using this strain [B21322].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paractinoplanes ovalisporus
JCM number: 33067 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; LDG1-06.
Source: Lichen Parmotrema sp., growing on the bark of Buchanania latifolia Roxb in Mahasarakham Province, Thailand [13439].
Morphology: [13439].
Biochemistry/Physiology: [13439].
Cell wall: meso-A2pm [13439].
Fatty acid: [13439].
Quinone: MK-9(H4) [13439].
Polar lipid: DPG, PG, PE, PI, PLs, AL, PAL, GL [13439].
G+C (mol%): 70.7 (genome sequence) [13439].
Phylogeny: 16S rRNA gene (LC599585), genome BLAST distance phylogeny [13439]; Concatenated 324 single-copy orthologous genes [14541].
Other taxonomic data: Average nucleotide identity [13439,14541]; Genome-to-genome distances [13439]; Average amino acid identity [14541].
Genome sequence: JAENHP000000000 [13439].
  
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Publication(s) using this strain [B21322].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hephaestia mangrovi
JCM number: 33125 <-- L. Tuo; Zunyi Med. Univ., China; CMS5P-6.
Source: Surface-sterilized bark of Aegiceras corniculatum from Guangxi Zhang Autonomous Region, PR China [13883].
Morphology: [13883].
Biochemistry/Physiology: [13883].
Cell wall: meso-A2pm [13883].
Fatty acid: [13883].
Quinone: Q-10 [13883].
Polar lipid: [13883].
G+C (mol%): 65.6 (genome sequence) [13883].
Phylogeny: 16S rRNA gene (ON875325), concatenated conserved core genes, concatenated sequences for core proteins [13882].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances [13883].
Genome sequence: JAINVU000000000 [13883].
Publication(s) using this strain [B22340].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces bauhiniae
JCM number: 33208 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; Bv016.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Tree bark of Bauhinia variegata Linn. from Chiang Rai Province, Thailand [12811].
Biochemistry/Physiology: [12811].
Cell wall: LL-A2pm; N-acetyl Mur; Glc, Man, Rib, Gal [12811].
Fatty acid: a-C15:0, i-C16:0, i-C15:0, i-C14:0 [12811].
Quinone: MK-9(H8), MK-9(H6), MK-9(H4) [12811].
Polar lipid: DPG, PE, PG, PI, PIM, PL, L, AL, GL [12811].
G+C (mol%): 71.7 (genome sequence) [12811].
Phylogeny: 16S rRNA gene (LC424455) [12811].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [12811].
Genome sequence: SRRT00000000 [12811].
Publication(s) using this strain [B20189].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Brachybacterium endophyticum
JCM number: 33403 <-- CGMCC 1.16391 <-- L. Tuo; Zunyi Med. Univ., China; M1HQ-2.
Source: Surface-sterilized bark of Scutellaria baicalensis Georgi from Guizhou, China [12412].
Biochemistry/Physiology: [12412].
Cell wall: meso-A2pm [12412].
Fatty acid: a-C15:0, a-C17:0, i-C16:0 [12412].
Quinone: MK-7 [12412].
Polar lipid: DPG, PG, PL, L [12412].
G+C (mol%): 71.0 (genome sequence) [12412].
Phylogeny: 16S rRNA gene (MH289757) [12412].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [12412].
Genome sequence: QFKX00000000 [12412].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Terrilactibacillus tamarindi
JCM number: 33748 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; BCM23-1.
Source: Bark of Tamarindus indica in Chiang Mai Province, Thailand [13129].
Morphology: [13129].
Biochemistry/Physiology: [13129].
Fatty acid: [13129].
Quinone: MK-7 [13129].
Polar lipid: [13129].
G+C (mol%): 37.1 (genome sequence) [13129].
Phylogeny: 16S rRNA gene (LC494102) [13129].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [13129].
Genome sequence: WNHB00000000 [13129].
Publication(s) using this strain [C20350].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
"Jiella avicenniae"
JCM number: 34330 <-- L. Tuo; Zunyi Med. Univ., China; CBK1P-4.
Source: Surface-sterilized bark of Avicennia marina from Beilun Estuary, Guangxi Zhuang Autonomous Region, China [14136].
Morphology: [14136].
Biochemistry/Physiology: [14136].
Cell wall: meso-A2pm [14136].
Fatty acid: [14136].
Quinone: Q-10 [14136].
Polar lipid: PC, PG, DPG, PE, PME, ALs, GL, PL [14136].
G+C (mol%): 66.7 (genome sequence) [14136].
Phylogeny: 16S rRNA gene (OP363709), concatenated housekeeping core genes [14136].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [14136].
Genome sequence: JAJUWU000000000 [14136].
  
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Publication(s) using this strain [B22092].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Jiella sonneratiae
JCM number: 34333 <-- L. Tuo; Zunyi Med. Univ., China; MQZ13P-4.
Source: Bark of Sonneratia apetala from Maowei sea Mangrove Nature Reserve in Guangxi Zhuang Autonomous Region, PR China [13656].
Morphology: [13656].
Biochemistry/Physiology: [13656].
Cell wall: meso-A2pm [13656].
Fatty acid: [13656].
Quinone: Q-10 [13656].
Polar lipid: [13656].
G+C (mol%): 68.1 (genome sequence) [13656].
Phylogeny: 16S rRNA gene (MW699789), concatenated sequences for core proteins [13656].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances [13656].
Genome sequence: JAFMPY000000000 [13656].
  
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Publication(s) using this strain [B22248].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Phycicoccus sonneratiae
JCM number: 34337 <-- L. Tuo; Zunyi Med. Univ., China; MQZ13P-5.
Source: Surface-sterilized bark of Sonneratia apetala from Guangxi Zhuang Autonomous Region, China [14316].
Morphology: [14316].
Biochemistry/Physiology: [14316].
Cell wall: meso-A2pm [14316].
Fatty acid: [14316].
Quinone: MK-8(H4) [14316].
Polar lipid: DPG, PE, PI, L [14316].
G+C (mol%): 73.5 (genome sequence) [14316].
Phylogeny: 16S rRNA gene (MW625961), concatenated 78 conserved core genes[14316].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [14316].
Genome sequence: JAFDVD000000000 [14316].
  
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Publication(s) using this strain [C23112].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Phycicoccus mangrovi
JCM number: 34556 <-- L. Tuo; Zunyi Med. Univ., China; KQZ13P-1.
Source: Bark of Sonneratia apetala from Maowei sea Mangrove Nature Reserve in Guangxi Zhuang Autonomous Region, Chinaed [13987].
Morphology: [13987].
Biochemistry/Physiology: [13987].
Cell wall: meso-A2pm [13987].
Fatty acid: [13987].
Polar lipid: DPG, PE, PI, PLs, Ls [13987].
G+C (mol%): 73.6 (genome sequence) [13987].
Phylogeny: 16S rRNA gene (MZ314847), concatenated 88 conserved core genes [13987].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances [13987].
Genome sequence: JAHHWP00000000 [13987].
  
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Publication(s) using this strain [C21544].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Weissella muntiaci
JCM number: 34858 <-- BCRC 81133 <-- J.-R. Guu; BCRC, FIRDI, Taiwan; 8H-2.
Source: Feces of Formosan barking deer which were collected in Fushan Botanical Garden, Yilan County, Taiwan [13223].
Biochemistry/Physiology: [13223].
Cell wall: A3α (L-Lys-L-Ala-L-Ser) [13223].
Fatty acid: [13223].
G+C (mol%): 40.5 (genome sequence) [13223].
Phylogeny: 16S rRNA gene (MK774696), pheS (MK983494), dnaA (MK983495) [13223].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [13223].
Genome sequence: SDGZ00000000 [13223].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Paenibacillus mangrovi
JCM number: 34931 <-- L. Tuo; Zunyi Med. Univ., China; KQZ6P-2.
Source: Bark of the mangrove plant Kandelia candel from Maowei Sea Mangrove Nature Reserve in Guangxi Zhuang Autonomous Region, China [14004].
Morphology: [14004].
Biochemistry/Physiology: [14004].
Cell wall: meso-A2pm [14004].
Fatty acid: [14004].
Polar lipid: DPG, PG, PE, APLs, PLs, AL, Ls [14004].
G+C (mol%): 47.2 (genome sequence) [14004].
Phylogeny: 16S rRNA gene (ON324827), concatenated sequences for core proteins [14004].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances [14004].
Genome sequence: JALIRP000000000 [14004].
  
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Publication(s) using this strain [C23215].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lentilactobacillus terminaliae
JCM number: 35081 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; SPB1-3.
Source: Tree bark of Terminalia ivorensis Chev. collected from Suphan Buri Province, Thailand [14683].
Biochemistry/Physiology: [14683].
Cell wall: [14683].
Fatty acid: [14683].
Quinone: [14683].
G+C (mol%): 37.6 (genome sequence) [14683].
DNA-DNA relatedness: [14683].
Phylogeny: 16S rRNA gene, phylogenomic analysis [14683].
Genome sequence: CP168151 [14683].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sporolactobacillus mangiferae
JCM number: 35082 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; CPB3-1.
Source: Tree bark in Thailand [14169].
Biochemistry/Physiology: [14169].
Cell wall: meso-A2pm [14169].
Fatty acid: [14169].
Quinone: MK-7 [14169].
Polar lipid: [14169].
G+C (mol%): 45.1 (genome sequence) [14169].
Phylogeny: 16S rRNA gene (LC647649) [14169].
Other taxonomic data: Average amino acid identity, average nucleotide identity, genome-to-genome distances [14169].
Genome sequence: JAMAST000000000 [14169].
  
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Publication(s) using this strain [C23291].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Takashimella corticis
JCM number: 35967 <-- Q.-M. Wang; Hebei Univ., China; 21812S.
Source: Bark [14533].
Locality: Bawangling mountain, Changjiang, Hainan province, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470236), D1/D2 region of LSU rRNA gene (OP470140), SSUrRNA gene (OP480064), RPB1 gene (OP784820), RPB2 gene (OP771424), TEF1 gene (OP853439) [14533].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cystobasidium cunninghamiae
JCM number: 35968 <-- Q.-M. Wang; Hebei Univ., China; XSR28-13.
Source: Bark of Cunninghamia sp. [14533].
Locality: Qilian mountain, Qinghai province, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470306), D1/D2 region of LSU rRNA gene (OP470210), SSUrRNA gene (OP480134), RPB1 gene (OP853425), RPB2 gene (OP771489), TEF1 gene (OP853496) [14533].
  
open link in new window
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Naematelia sp.
JCM number: 35970 <-- Q.-M. Wang; Hebei Univ., China; XZY420-1.
Source: Bark of Huodendron tibeticum [14533].
Locality: New Basom Lake, Linzhi, Tibet, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470293), D1/D2 region of LSU rRNA gene (OP470197), SSUrRNA gene (OP480121), RPB1 gene (OP853416), RPB2 gene (OP771476) [14533].
  
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Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Mrakia pini
JCM number: 35971 <-- Q.-M. Wang; Hebei Univ., China; XZY414-1.
Source: Bark of Pinus sp. [14533].
Locality: New Basom Lake, Linzhi, Tibet, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470265), D1/D2 region of LSU rRNA gene (OP470169), SSUrRNA gene (OP480093), RPB1 gene (OP784844), RPB2 gene (OP771450), TEF1 gene (OP853454) [14533].
  
open link in new window
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Papiliotrema sp.
JCM number: 35972 <-- Q.-M. Wang; Hebei Univ., China; motuo45-1.
Source: Bark [14533].
Locality: Motuo county, Tibet, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470270), D1/D2 region of LSU rRNA gene (OP470174), SSUrRNA gene (OP480098), RPB1 gene (OP784849), RPB2 gene (OP771455), TEF1 gene (OP853458) [14533].
  
open link in new window
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Fibulobasidium sp.
JCM number: 36101 <-- Q.-M. Wang; Hebei Univ., China; XSR1-14.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark of Cunninghamia sp. [14533].
Locality: Qilian mountain, Qinghai province, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470250), D1/D2 region of LSU rRNA gene (OP470154), SSUrRNA gene (OP480078), RPB1 gene (OP784832), RPB2 gene (OP771437), TEF1 gene (OP853485) [14533].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Holtermannia pseudosaccardoi
JCM number: 36107 <-- Q.-M. Wang; Hebei Univ., China; 21825S-11.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark [14533].
Locality: Bawangling mountain, Changjiang, Hainan province, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470257), D1/D2 region of LSU rRNA gene (OP470161), SSUrRNA gene (OP480085), RPB1 gene (OP784838), RPB2 gene (OP771444), TEF1 gene (OP853505) [14533].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudotremella hippophaes
JCM number: 36126 <-- Q.-M. Wang; Hebei Univ., China; XSR10-2.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark of Hippophae rhamnoides [14533].
Locality: Qilian mountain, Qinghai province, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470285), D1/D2 region of LSU rRNA gene (OP470189), SSUrRNA gene (OP480113), RPB1 gene (OP784863), RPB2 gene (OP771469), TEF1 gene (OP853466) [14533].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Vishniacozyma pini
JCM number: 36166 <-- Q.-M. Wang; Hebei Univ., China; XZY496-1.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark of Pinus sp. [14533].
Locality: New Basom Lake, Linzhi, Tibet, China [14533].
Phylogeny: ITS & 5.8S rRNA gene (OP470296), D1/D2 region of LSU rRNA gene (OP470200), SSUrRNA gene (OP480124), RPB1 gene (OP784872), RPB2 gene (OP771479), TEF1 gene (OP853493) [14533].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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