Strain data

Search for keyword=[bark].
Anaerotignum propionicum
JCM number: 1430 <-- ATCC 25522 <-- L. DS. Smith VPI 5303 <-- M. Poston <-- E. Stadtman <-- H. Barker X2.
Source: Black mud from San Francisco Bay, CA, USA [2730].
Biochemistry/Physiology: [11790].
Cell wall: [1386].
Fatty acid: [11790].
Phylogeny: 16S rRNA gene (AB649276, X77841) [3997].
Other taxonomic data: Protein profile [2652].

Patent publication(s) using this strain [JP2009-138174A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Priceomyces haplophilus
JCM number: 1635 <-- IAM 12268 <-- IFO 0947 <-- UCD 52-11.
Source: Bark beetle Dendroctonus jeffreyi (Coleoptera, Scolytidae) in Pinus jeffreyi (Pinales, Pinaceae) [1453].
Locality: California, USA.
Quinone: Q-9 [204].
G+C (mol%): 39.0 [203].
Phylogeny: D1/D2 region of 26S rRNA gene (U45770) [4293,4520], 18S rRNA gene (AB054284), ITS & 5.8S rRNA gene (AB054117).
More information: Type strain of Pichia halophila.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13851.
 
open link in new window

open link in new window

Publication(s) using this strain [A18085].
Positive phenotypes
 <Assimilation>Hexadecane

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida oregonensis
JCM number: 1811 <-- AJ 5111 <-- UCD 60-73.
Source: Insect frass in bark of Tsuga heterophylla (Pinales, Pinaceae) [1270].
Locality: Oregon, USA [1270].
Biochemistry/Physiology: [1270].
Quinone: Q-9 [209,5119].
G+C (mol%): 48.0 [195], 48.0 [453].
Phylogeny: 18S rRNA gene (AB013545) [4568], D1/D2 region of 26S rRNA gene (U44815) [4293,4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
More information: CUG codon usage [4568].
 
open link in new window

open link in new window

open link in new window

Publication(s) using this strain [A14161].
Positive phenotypes
   Hexadecane

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea nigricans
JCM number: 1870 <-- Y. Doi D.5066c.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea muroiana
JCM number: 1871 <-- Y. Doi D.5066(2).
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea nigricans
JCM number: 1874 <-- Y. Doi D.5309a.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trichoderma stramineum
JCM number: 1875 <-- Y. Doi D.5309c.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan [437].
Other taxonomic data: ITS1 (AF011998).
More information: Originally treated as T. hamatum [437], but reidentified as T. stramineum based on ITS, rpb2, and tef1 genes (cf., NBRC online catalogue).
 
open link in new window

Publication(s) using this strain [A14515, A14516].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trichoderma harzianum
JCM number: 1876 <-- Y. Doi D.5309e.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.
 
open link in new window

Publication(s) using this strain [A18171].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea muroiana
JCM number: 1877 <-- Y. Doi D.5310b2.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea nigricans
JCM number: 1878 <-- Y. Doi D.5310c.
Source: Bark of Quercus log for mushroom cultivation of Lentinula edodes (Shiitake) [437].
Locality: Odoi, Toi-cho, Tagata-gun, Shizuoka, Japan.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kuraishia capsulata
JCM number: 1994 <-- IAM 12807 <-- IFO 1769 <-- K. Mikata Og-40ml.
Source: Bark.
Locality: Japan.
Enzyme electrophoretic profile: [1030].
G+C (mol%): 46.6 [1030].
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kuraishia molischiana
JCM number: 1997 <-- IAM 12810 <-- CBS 136 <-- ATCC 2516 <-- Tanner Collection <-- H. Zikes.
Source: Used tanbark.
Quinone: Q-8 [1030,5119].
Enzyme electrophoretic profile: [1030].
G+C (mol%): 50.1 [1030].
Phylogeny: D1/D2 region of 26S rRNA gene (U70178); 18S rRNA gene (AB018169) [4712]; ITS & 5.8S rRNA gene (EF568065); elongation factor 1 gene (EU014693).
Other taxonomic data: PMR spectrum of polysaccharide [1030]; Cellular carbohydrate composition [5119].
Taxonomy: [200].
More information: Type strain of Torula molischiana.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hanseniaspora osmophila
JCM number: 2186 <-- IAM 12828 <-- IFO 0631 <-- NCYC 31 <-- A. Klöcker.
Source: Tree bark.
Locality: Kobenhavn, Denmark.
Enzyme electrophoretic profile: [1001].
Serology: [1283].
G+C (mol%): 37.8 [1278], 40.5 [1279].
DNA-DNA relatedness: [1279].
More information: Type strain of Pseudosaccharomyces corticis.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida tenuis
JCM number: 2313 <-- AJ 5750 <-- T. Tsuchiya J-1191 <-- CBS 2308 <-- E. C. Holst.
Source: Bark beetle.
Locality: USA.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Wickerhamomyces bisporus
JCM number: 3590 <-- AJ 5029 <-- NRRL Y-1482.
Source: Frass from a beetle gallery of Ips typographus (Coleoptera, Scolytidae) beneath the bark of spruce [1286].
Locality: Austria [1286].
Quinone: Q-7 [204].
Enzyme electrophoretic profile: [1002].
G+C (mol%): 37.1 [1843], 36.3 [281].
DNA-DNA relatedness: [1843].
Phylogeny: D1/D2 region of 26S rRNA gene (U74589) [4520], 18S rRNA gene (EF550434), elongation factor 1 gene (EF552520).
Other taxonomic data: PMR spectrum of polysaccharide [1756].
Taxonomy: [1286,1884].
More information: Type strain of Endomyces bisporus and Hansenula beckii.
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Schwanniomyces pseudopolymorphus
JCM number: 3652 <-- AJ 5081 <-- CBS 2008 <-- J. Boidin.
Source: Tanning fluid prepared from sweet-chestnut bark.
Locality: Lyon, France.
Quinone: Q-9 [204].
G+C (mol%): 35.7 [1128].
DNA-DNA relatedness: [1128].
Phylogeny: 18S & 25S rRNA genes [3197], D1/D2 region of 26S rRNA gene (U45845) [4293,4520], 18S rRNA gene (AB054273).
More information: Type strain of Pichia pseudopolymorpha.
 
open link in new window

Patent publication(s) using this strain [WO2009/008362].
Positive phenotypes

 <Fermentation>Cellobiose   Sucrose
 <Growth>in 10% NaCl

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yamadazyma scolyti
JCM number: 3654 <-- AJ 5073 <-- CBS 4802 <-- H. J. Phaff.
Source: Frass of bark beetle Scolytus ventralis (Coleoptera, Scolytidae) in red fir Abies concolor (Pinales, Pinaceae).
Locality: California, USA.
Mating type: Mates to CBS 4803.
Quinone: Q-9 [204].
Phylogeny: D1/D2 region of 26S rRNA gene (U45788) [4293,4520], 18S rRNA gene (FJ153138), actin gene (EU343958).
More information: Type strain of Endomycopsis scolyti.
 
open link in new window

open link in new window

Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ogataea pini
JCM number: 3655 <-- AJ 5082 <-- CBS 744 <-- C. A. Richards.
Source: Bark beetle Dendroctonus brevicomis (Coleoptera, Scolytidae) in Pinus ponderosa (Pinales, Pinaceae).
Locality: Oregon, USA.
Quinone: Q-7 [204].
G+C (mol%): 44.4 [203].
Phylogeny: D1/D2 region of 26S rRNA gene (U75527,AB440275) [4520,12015], 18S rRNA gene (EU011703), ITS & 5.8S rRNA gene (AB440282) [12015], elongation factor 1 gene (EU014733).
More information: Type strain of Zygosaccharomyces pini.
 
open link in new window

Publication(s) using this strain [A08173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rhodotorula araucariae
JCM number: 3770 <-- S. Goto YK 161 <-- CBS 6031 <-- J. Grinbergs.
Source: Rotting bark of monkey-puzzle tree Araucaria araucana (Pinales, Araucariaceae).
Locality: Llaima, Chile.
Fatty acid: [3921].
Quinone: Q-10 [1822].
Enzyme electrophoretic profile: [1822].
G+C (mol%): 64.6 [1822].
Phylogeny: D1/D2 region of 26S rRNA gene (AF070427) [4890], ITS (AF444510).
Other taxonomic data: Cellular carbohydrate composition [1822].
 
open link in new window

Publication(s) using this strain [A15599].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Rhodotorula philyla
JCM number: 3933 <-- CBS 6272 <-- J. P. van der Walt.
Source: Tunnels of bark beetle Xyleborus ferrugineus (Coleoptera, Scolytidae) in Harpephyllum caffrum (Sapindales, Anacardiaceae).
Locality: Natal, South Africa.
G+C (mol%): 62.9 [2079,2123].
Phylogeny: D1/D2 region of 26S rRNA gene (AF075471) [4751], ITS (AF444506).
Other taxonomic data: Cellular carbohydrate composition [2616].
Taxonomy: [200,2617].
More information: Type strain of Torulopsis philyla.
 
open link in new window

Publication(s) using this strain [A15599].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Myxozyma melibiosi
JCM number: 5195 <-- M. Yamazaki YK 924 <-- CBS 2667 <-- H. J. Phaff.
Source: Bark beetle Dendroctonus monticolae (Coleoptera, Scolytidae) in Pinus ponderosa (Pinales, Pinaceae).
Locality: California, USA.
Enzyme electrophoretic profile: [1842].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hamamotoa singularis
JCM number: 5356 <-- CBS 5109 <-- H. J. Phaff.
Source: Frass of bark beetle Scolytus tsugae (Coleoptera, Scolytidae) in Tsuga heterophylla (Pinales, Pinaceae) [1270].
Locality: Oregon, USA [1270].
Quinone: Q-10 [1874].
Enzyme electrophoretic profile: [1003].
Phylogeny: D1/D2 region of 26S rRNA gene (AF189996) [4751], 18S rRNA gene (D10819) [3339], 18S rRNA gene (AB021690) [4769], ITS (AF444600).
Other taxonomic data: Cellular carbohydrate composition [1829,2450].
Taxonomy: [1270].
 
open link in new window

Publication(s) using this strain [A15599].
Patent publication(s) using this strain [WO2012/161108 , 2015-192683].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ascoidea asiatica
JCM number: 7603 <-- S. Goto TH-7 <-- ATCC 24275 <-- CBS 457.69 <-- J. Grinbergs.
Source: Decaying bark of Araucaria araucana.
Locality: Lonquimay, Chile.
Quinone: Q-8 [2627].
Enzyme electrophoretic profile: [2627].
More information: Type strain of Ascoidea corymbosa.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13903.
 
open link in new window

open link in new window

Publication(s) using this strain [A18085].
Delivery category: Domestic, A or C; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Yamadazyma scolyti
JCM number: 8046 <-- S. Goto TH-30 <-- IFO 1280 <-- T. Tsuchiya J-9061 <-- CBS 4802 <-- H. J. Phaff.
Source: Frass of bark beetle Scolytus ventralis (Coleoptera, Scolytidae) in red fir Abies concolor (Pinales, Pinaceae).
Locality: California, USA.
Mating type: Mates to CBS 4803.
Quinone: Q-9 [204].
Phylogeny: D1/D2 region of 26S rRNA gene (U45788) [4293,4520], 18S rRNA gene (FJ153138), actin gene (EU343958).
More information: Type strain of Endomycopsis scolyti.
 
open link in new window

Positive phenotypes
   Trehalose
 <Growth>in 10% NaCl

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dictyocatenulata alba
JCM number: 8401 <-- G. Okada OFC 3917.
Source: Lichenized bark of a rotting unidentified tree [9223].
Locality: Fureai-no-mori, Uken-son, Amami-oshima, Kagoshima, Japan [9223].
Morphology: [9223].
Phylogeny: 18S rRNA gene (AB570324) [9223], ITS & 5.8S rRNA gene (AB570314) [9223], 28S rRNA gene (AB570319) [9223].
Taxonomy: [9223].
More information: Introns in 18S rRNA gene [9223].

Publication(s) using this strain [B12099].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Herbidospora cretacea
JCM number: 8549 <-- T. Itoh I-385.
Source: Bark of Japanese red pine (Pinus densiflora), Saitama Pref., Japan [3324].
Biochemistry/Physiology: [3324].
Cell wall: meso-A2pm; a trace of Mad; N-acetyl Mur [3324].
Fatty acid: Type 3c [3324].
Quinone: MK-10(III,IX-H4), MK-10(H2), MK-10(H6) [3324].
Polar lipid: Type PIV [3324].
G+C (mol%): 71 (HPLC) [3324].
DNA-DNA relatedness: [3324].
Genome sequence: JODQ00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma quercus
JCM number: 8809 <-- Y. Yamaoka YCC-178.
Source: Black-stained part of inner bark of Quercus mongolica var. grosseserrata infested with Platypus quercivorus [7507].
Locality: Oshima, Higashikubiki-gun, Niigata, Japan [7507].
More information: Treated once as Ophiostoma piceae; Ophiostoma querci should be read as O. quercus, cf. [5606,7507].
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Phaeotremella skinneri
JCM number: 9039 <-- IFO 1872 <-- Y. Fukazawa MCP2015 <-- CBS 5029 <-- H. J. Phaff.
Source: Insect frass beneath the bark of hemlock Tsuga heterophylla (Pinales, Pinaceae) [1270].
Locality: Oregon, USA [1270].
Biochemistry/Physiology: [1270].
G+C (mol%): 53.0 (Bd) [1130].
Phylogeny: D1/D2 region of 26S rRNA gene (AF189835) [4751]; 18S rRNA gene (AB032646) [4714]; ITS & 5.8S rRNA gene (AF444305); 18S & 26S rRNA genes [3843].
Other taxonomic data: Cellular carbohydrate composition [1756].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 13840.
 
open link in new window

Publication(s) using this strain [A18562].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida akabanensis
JCM number: 9115 <-- T. Nakase NK-4.
Source: Insect frass in bark of grape vine Vitis vinifera (Rhamnales, Vitaceae) [3897].
Locality: Akabane, Chigasaki, Kanagawa Pref., Japan [3897].
Morphology: [3897].
Biochemistry/Physiology: [3897].
Quinone: Q-9 [3897,5119].
Serology: [3897].
G+C (mol%): 47.0 (HPLC) [3897].
DNA-DNA relatedness: [3897].
Phylogeny: 18S rRNA gene (AB013514) [4568].
Other taxonomic data: Cellular carbohydrate composition [5119]; PMR spectrum of polysaccharide [3897].
More information: CUG codon usage [4568].
 
open link in new window

Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Galactose   Maltose   Sucrose   Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida akabanensis
JCM number: 9116 <-- T. Nakase NK-6.
Source: Insect frass in bark of grape vine Vitis vinifera (Rhamnales, Vitaceae) [3897].
Locality: Akabane, Chigasaki, Kanagawa Pref., Japan [3897].
Biochemistry/Physiology: [3897].
Quinone: Q-9 [3897].
Serology: [3897].
G+C (mol%): 47.6 (HPLC) [3897].
DNA-DNA relatedness: [3897].
Other taxonomic data: PMR spectrum of polysaccharide [3897].

Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Galactose   Sucrose   Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida akabanensis
JCM number: 9117 <-- T. Nakase NK-9.
Source: Insect frass in bark of grape vine Vitis vinifera (Rhamnales, Vitaceae) [3897].
Locality: Akabane, Chigasaki, Kanagawa Pref., Japan [3897].
Biochemistry/Physiology: [3897].
Quinone: Q-9 [3897].
Serology: [3897].
G+C (mol%): 48.2 (HPLC) [3897].
DNA-DNA relatedness: [3897].

Positive phenotypes

 <Assimilation>Hexadecane
 <Fermentation>Galactose   Sucrose   Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma japonicum
JCM number: 9366 <-- Y. Yamaoka YCC-99.
Source: Egg gallery wall (bark) of Ips typographus japonicus Niijima in Picea jezoensis (Sieb. & Zucc.) Carr..
Locality: Tokyo University forest in Hokkaido, Yamabe, Furano, Hokkaido, Japan.
Description: [4285].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Prototheca zopfii
JCM number: 9400 <-- T. Nakase <-- T. Hatano KO-45.
Source: Bark of a cherry tree [3694].
Morphology: [3694].
Biochemistry/Physiology: [3694].
Quinone: Q-8 [3694].
G+C (mol%): 64.6 [3694].
Other taxonomic data: Cellular neutral sugar composition [3694].
 
open link in new window

Publication(s) using this strain [A04180, A13462, A13502, A14438].
Patent publication(s) using this strain [JP2008-148663A, JP2009-112245A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pestalotiopsis sp.
JCM number: 9686 <-- F. Sugawara KR22-2A3.
Source: Bark of Taxus brevifolia.
Locality: Bozeman, MT, USA [4273].
More information: Review on the secondary metabolites of Pestalotiopsis [8415].
Production: Isoprenoid [4273].
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kionochaeta spissa
JCM number: 9817 <-- G. Okada OFC 5010.
Source: Wet decaying bark of an unidentified tree.
Locality: Sumiyou, Amami Isl., Kagoshima Pref., Japan.
Description: [4350].
Phylogeny: 18S rRNA gene (AB003789) [4350].
More information: Dried culture (TNS-F-181992).
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida tenuis
JCM number: 9827 <-- CBS 615 <-- E. C. Holst.
Source: Bark beetle.
Locality: USA.
Quinone: Q-9 [5119].
Phylogeny: D1/D2 region of 26S rRNA gene (U45774) [4293,4520], 18S rRNA gene (AB013516) [4568], ITS & 5.8S rRNA gene (HQ283371).
Other taxonomic data: Cellular carbohydrate composition [5119].
More information: CUG codon usage [4568].
 
open link in new window

Positive phenotypes
   Galactose   Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida ernobii
JCM number: 9848 <-- IFO 0654 <-- CBS 1737 <-- W. Schwartz.
Source: Intracellular symbiont of Ernobius mollis (bark beetle) [288].
Locality: Ireland.
Morphology: [288].
Biochemistry/Physiology: [288].
Quinone: Q-8 [209,2798,5119].
G+C (mol%): 36.1 (Tm) [292].
Phylogeny: 18S rRNA gene (AB018161) [4712], D1/D2 region of 26S rRNA gene (U70241) [4520].
Other taxonomic data: Cellular carbohydrate composition [5119].
Taxonomy: [200].
More information: Type strain of Torulopsis ernobii.
 
open link in new window

Positive phenotypes
   Cellobiose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida nemodendra
JCM number: 9855 <-- IFO 10299 <-- CBS 6280 <-- J. P. van der Walt.
Source: Gallery of bark beetle Xyleborus aemulus (pin-borer beetle, Coleoptera, Scolytidae) in Rapanea melanophloeos (Ericales, Primulaceae) [3915].
Locality: Blue Lilies, Cape Province, South Africa [3915].
Quinone: Q-7 [5119].
G+C (mol%): 42.4 (Tm), 43.2 (Tm).
Phylogeny: D1/D2 region of 26S rRNA gene (U70246) [4520], 18S rRNA gene (AB054546), elongation factor 1 gene (EU014739).
Other taxonomic data: Cellular carbohydrate composition [5119].
More information: Type strain of Torulopsis nemodendra [3915].
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Candida nitratophila
JCM number: 9856 <-- IFO 10300 <-- CBS 2027 <-- UCD 52-85 <-- H. J. Phaff.
Source: Bark beetle Dendroctonus monticolae (Coleoptera, Scolytidae) in Pinus ponderosa (Pnales, Pinaceae).
Locality: California, USA.
Quinone: Q-7 [5119].
G+C (mol%): 36.6 (Tm).
Phylogeny: D1/D2 region of 26S rRNA gene (U70180) [4520], 18S rRNA gene (AB054548), elongation factor 1 gene (EU014715).
Other taxonomic data: Cellular carbohydrate composition [5119].
More information: Type strain of Torulopsis nitratophila.
 
open link in new window

Positive phenotypes
   Galactose   Trehalose

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Kionochaeta ivoriensis
JCM number: 9876 <-- CBS 374.76 <-- A. Rambelli and D. Lunghini.
Source: Dead bark.
Locality: Lamto area near the Bandama river, Cote d'Ivoire [4071].
Description: [4071].
Morphology: [4071].
Phylogeny: 18S rRNA gene (AB003787) [4350].
Taxonomy: [4350].
More information: Ex-type strain of Chaetopsina ivoriensis.
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Eubacterium sp.
JCM number: 9976 <-- STAFF 1028 <-- ATCC 10825 <-- H. A. Barker 32 of group A2.
Source: Intestinal contents of white rats [10811].
Biochemistry/Physiology: [10811].
Phylogeny: 16S rRNA gene (LC145549).
More information: Cataloged as Eubacterium limosum until Nov. 2015.
 
open link in new window

open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Gordonia hydrophobica
JCM number: 10086 <-- CIP 104672 <-- DSM 44015 <-- B. Bendinger 1610/1b.
Source: Tree bark compost of biofilter for waste gas purification of animal rendering plant emissions [3788].
Biochemistry/Physiology: [3788,4234].
Cell wall: meso-A2pm (type A1γ); N-glycolyl Mur; Ara, Gal [3788].
Fatty acid: [3788,4209,4234].
Quinone: MK-9(H2) [3788].
Polar lipid: DPG, PI, PIM, PE [3788].
G+C (mol%): 69 (HPLC) [3788], 67.5 (genome sequence) [12227].
Phylogeny: 16S rRNA gene (X87340) [3788], gyrB (AB438186), secA1 (AB437914) [8445].
Other taxonomic data: Mycolic acid [3788,4210,4234].
Genome sequence: BCWU00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinomadura nitritigenes
JCM number: 10104 <-- DSM 44137 <-- A. Lipski L46.
Source: Biofilter containing tree bark compost as the packing material [4214].
Biochemistry/Physiology: [4214].
Cell wall: meso-A2pm; Mad, Gal [4214].
Fatty acid: [4214].
Quinone: MK-9(H6), MK-9(H8), MK-9(H4) [4214].
Polar lipid: DPG, PI, PIM [4214].
G+C (mol%): 74 (HPLC) [4214].
Phylogeny: 16S rRNA gene (AB364595, AJ293708, AY035999) [5400].

Publication(s) using this strain [B16437, A18099].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Gordonia hirsuta
JCM number: 10105 <-- DSM 44140 <-- S. Klatte K718a.
Source: Wet-ground filter material (fiber bark compost) from a large scale biofilter [4234].
Biochemistry/Physiology: [4234].
Cell wall: meso-A2pm; Ara, Gal (chemotype IV); N-glycolyl Mur [4234].
Fatty acid: [4234].
Quinone: MK-9(H2) [4234].
Polar lipid: DPG, PI, PIM, PE [4234].
G+C (mol%): 69 (HPLC) [4234].
Phylogeny: 16S rRNA gene (X93485) [4234], gyrB (AB438185), secA1 (AB437913) [8445].
Other taxonomic data: Mycolic acid [4234].
Genome sequence: ATVK00000000, BANT00000000.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Niesslia exilis
JCM number: 10162 <-- CBS 357.70 <-- W. Gams.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark of Picea abies.
Locality: Kaltenhofen, Kr. Eckernförde, Germany.
Description: [4281].
Morphology: [4281].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudonocardia asaccharolytica
JCM number: 10410 <-- A. Lipski 580.
Source: Tree-bark compost from biofilters [4334].
Biochemistry/Physiology: [4334].
Cell wall: meso-A2pm; N-acetyl Mur; Ara, Gal [4334].
Fatty acid: [4334].
Quinone: MK-8(H4) [4334].
Polar lipid: Type PII (DPG, PME, PG, PI, PIM, OH-PE) [4334].
G+C (mol%): 71.8 (genome sequence) [12227].
DNA-DNA relatedness: [4334].
Phylogeny: 16S rRNA gene (Y08536) [4334], gyrB (EU722564).
Genome sequence: AUII00000000.
More information: Degrades dimethyl disulfide [4334].

Publication(s) using this strain [A16082].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudonocardia sulfidoxydans
JCM number: 10411 <-- A. Lipski 592.
Source: Tree-bark compost from biofilters [4334].
Biochemistry/Physiology: [4334].
Cell wall: meso-A2pm; N-acetyl Mur; Ara, Gal [4334].
Fatty acid: [4334].
Quinone: MK-8(H4) [4334].
Polar lipid: Type PII (DPG, PME, PE, PG, PI, PIM, OH-PE) [4334].
DNA-DNA relatedness: [4334].
Phylogeny: 16S rRNA gene (Y08537) [4334].
More information: Degrades dimethyl sulfide and dimethyl disulfide [4334].

Publication(s) using this strain [A16082, A17203].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clonostachys compactiuscula
JCM number: 10746 <-- TC 1292.
Source: Bark [5128].
Locality: Mt. Sekido, Kajima, Kajima-gun, Ishikawa Pref., Japan [5128].
Description: [5128].
Morphology: [5128].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma subalpinum
JCM number: 11716 <-- Y. Yamaoka YCC-408.
Source: Cryphalus montanus in Abies mariesii [11531].
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan [5699,11531].
Mating type: Mixed [11531].
Phylogeny: EF-1α gene (LC090750) [11531].
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma subalpinum
JCM number: 11717 <-- Y. Yamaoka YCC-410.
Source: Polygraphus proximus in Abies mariesii.
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma subalpinum
JCM number: 11718 <-- Y. Yamaoka YCC-411.
Source: Sapwood of Abies mariesii under galleries of Cryphalus montanus.
Locality: West of Mt. Ohmanako, Nikko, Tochigi, Japan [11531] (cited as JCM 11717).
Mating type: Mixed [11531] (cited as JCM 11717).
Phylogeny: EF-1α gene (LC090751) [11531] (cited as JCM 11717).
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma sp.
JCM number: 11719 <-- Y. Yamaoka YCC-412.
Source: Polygraphus proximus in Abies mariesii.
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma sp.
JCM number: 11720 <-- Y. Yamaoka YCC-414.
Source: Egg gallery of Polygraphus proximus in Abies mariesii.
Locality: West of Mt. Ohmanako, Nikko, Tochigi Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia europhioides
JCM number: 11721 <-- Y. Yamaoka YCC-417.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173, C16539].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia europhioides
JCM number: 11722 <-- Y. Yamaoka YCC-419.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: West of Mt. Ohmanako, Nikko, Tochigi, Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia davidsonii
JCM number: 11723 <-- Y. Yamaoka YCC-420.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: North of Yusengatake, Oku-Nikko, border between Tochigi Pref. and Gunma Pref., Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia davidsonii
JCM number: 11724 <-- Y. Yamaoka YCC-423.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: West of Mt. Ohmanako, Nikko, Tochigi, Japan.
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia abieticola
JCM number: 11725 <-- Y. Yamaoka YCC-424.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: North of Yusengatake, Nikko, border between Tochigi and Gunma, Japan.
Description: [5780].
Morphology: [5780].
Phylogeny: ITS (AB506675) [11240].
Taxonomy: New combination [11240].
More information: Ex-holotype (TNS-F-6688) [5780]; Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173, C04211].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Grosmannia abieticola
JCM number: 11726 <-- Y. Yamaoka YCC-427.
Source: Dryocoetes hectographus in Abies mariesii.
Locality: West of Mt. Ohmanako, Nikko, Tochigi, Japan.
Description: [5780].
More information: Pathogenicity associated with bark beetles and Abies species [5699].
 
open link in new window

Publication(s) using this strain [C04173, C04211].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma quercus
JCM number: 12451 <-- J.-W. Huang OPH-106.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark and sapwood of diseased Chinese fir (Cunninghamia lanceolata) var. lanceolata.
Locality: Dongshi Town, Taichung County, Taiwan.
Morphology: [5605].
Biochemistry/Physiology: [5605].
Other taxonomic data: ITS [5605].
More information: With Pesotum and Sporothrix synanamorphs [5605]; Mating experiment [5605]; Scientific name [5606].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma quercus
JCM number: 12452 <-- J.-W. Huang OPH-110.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark and sapwood of diseased Chinese fir (Cunninghamia lanceolata) var. lanceolata.
Locality: Puli Town, Nantou County, Taiwan.
Morphology: [5605].
Biochemistry/Physiology: [5605].
Cell wall: Cellulose [5605].
More information: With Pesotum and Sporothrix synanamorphs [5605]; Mating experiment [5605]; Scientific name [5606].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma breviusculum
JCM number: 12500 <-- Y. Yamaoka YCC-519.
Source: Bark beetle Dryocoetes baicalicus Reitter in Larix kaempferi (Lamb.) Carr..
Locality: Yumihari Pass, Nikko, Tochigi, Japan.
Description: [7507,11531].
Mating type: A [11531].
Phylogeny: ITS & 5.8S rRNA gene (AB200421) [7507], β-tubulin gene (AB200427, HM031516) [7507,8461].
More information: Single ascospore isolate from YCC-494 (JCM 11980) [7507].
 
open link in new window

Publication(s) using this strain [C06245, A10235].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma breviusculum
JCM number: 12501 <-- Y. Yamaoka YCC-522.
Source: Bark beetle Dryocoetes baicalicus Reitter in Larix kaempferi (Lamb.) Carr..
Locality: Yumihari Pass, Nikko, Tochigi, Japan.
Description: [7507].
Mating type: B [11531].
Phylogeny: ITS & 5.8S rRNA gene (AB200423) [7507], β-tubulin gene (HM031517) [8461].
More information: Single ascospore isolate from YCC-494 (JCM 11980) [7507].
 
open link in new window

Publication(s) using this strain [C06245, A10235].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma floccosum
JCM number: 12502 <-- Y. Yamaoka YCC-523.
Source: Bark beetle Ips cembrae Heer in Larix kaempferi (Lamb.) Carr..
Locality: Utsunomiya University Forests, Nikko, Tochigi, Japan.
More information: Single ascospore isolate from YCC-486 (JCM 11978) [7507]; Identified by Adnan Uzunovic.
 
open link in new window

Publication(s) using this strain [C06245].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Ophiostoma floccosum
JCM number: 12503 <-- Y. Yamaoka YCC-526.
Source: Bark beetle Ips cembrae Heer in Larix kaempferi (Lamb.) Carr..
Locality: Utsunomiya University Forests, Nikko, Tochigi, Japan.
More information: Single ascospore isolate from YCC-486 (JCM 11978) [7507]; Identified by Adnan Uzunovic.
 
open link in new window

Publication(s) using this strain [C06245].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Cystobacter velatus
JCM number: 12628 <-- DSM 14718 <-- H. Reichenbach Cb v34.

Source: Soil with bark and wood, India.
Phylogeny: 16S rRNA gene (DQ768115).

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Melittangium boletus
JCM number: 12633 <-- DSM 14713 <-- H. Reichenbach Me b8.

Source: Soil with raw humus, Rotting wood, bark and white marl from swampy region, India.
Phylogeny: 16S rRNA gene (AJ233908, DQ768125) [7495].
Taxonomy: [6279,9750].
Genome sequence: CP022163.
More information: Designation as the type strain [9750].

Publication(s) using this strain [C13366].
Delivery category: Domestic, A or C; Overseas, B.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Corynebacterium tuberculostearicum
JCM number: 13389 <-- CCUG 45418 <-- W. L. Barksdale strain Medalle X <-- C. Reich.
Biosafety level 2.
Source: Human bone marrow, the Philippines [6114].
Biochemistry/Physiology: [6114].
Fatty acid: [6114].
Phylogeny: 16S rRNA gene (AJ438050) [6114].
Other taxonomic data: Whole-cell protein profile [6114].
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD 07703.

Patent publication(s) using this strain [JP2011-167082A].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Aegerita candida
JCM number: 13419 <-- G. Okada OFC 5318.
Source: Wet hard wood without bark.
Locality: Taraigoya-sawa research plot No. T4, Mt. Tanzawa, Susugatani, Kiyokawa-mura, Aiko-gun, Kanagawa, Japan (35 26 46.5 N, 139 11 58.5 E).
More information: Identified by G. Okada.
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Pseudaegerita corticalis
JCM number: 13420 <-- G. Okada OFC 5319.
Source: Wet soft wood without bark.
Locality: Taraigoya-sawa research plot No. T4, Mt. Tanzawa, Susugatani, Kiyokawa-mura, Aiko-gun, Kanagawa, Japan (35 26 46.5 N, 139 11 58.5 E).
More information: Identified by G. Okada.
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Petrakia echinata
JCM number: 14130 <-- CBS 112395 <-- T. N. Sieber.
Source: Bark of twigs of Fagus sylvatica (Fagaceae).
Locality: Camporgiano, Italy.
More information: Isolated from endophytic mycelium; Identified by T. N. Sieber.
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Massarina rubi
JCM number: 14146 <-- CBS 109941 <-- A. Aptroot 51403.
Source: Bark of Juglans regia (Juglandaceae).
Locality: Fort Rhijnauwen, Utrecht, the Netherlands.
More information: Identified by A. Aptroot.
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Clostridium aceticum
JCM number: 15732 <-- DSM 1496 <-- M. Braun <-- H. A. Barker <-- K. T. Wieringa.
Source: Mud.
Biochemistry/Physiology: [7484].
G+C (mol%): 33 [7484].
Phylogeny: 16S rRNA gene (AB910752, Y18183).
 
open link in new window

open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Lachancea nothofagi
JCM number: 16504 <-- D. Libkind CRUB 1792.
Source: Bark of Nothofagus antarctica (Fagaceae) [8705].
Locality: Native forest in Guillelmo Lake area, Nahuel Huapi National Park, Argentina [8705].
Description: [8705].
Morphology: [8705].
Biochemistry/Physiology: [8705].
Phylogeny: D1/D2 region of 26S rRNA gene (FJ707476) [8705].
Taxonomy: [8705].
More information: Growth at 30°C is negative [8705].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinomycetospora corticicola
JCM number: 17981 <-- KACC 14253 <-- NBRC 103689 <-- T. Tamura 014-5.
Source: Bark of a mangrove tree, Kandelia candel, Iriomote Island, Okinawa Pref., Japan [8792].
Biochemistry/Physiology: [8792].
Cell wall: meso-A2pm, D- & L-Ala, D-Glu; Ara, Gal, Glc [8792].
Fatty acid: i-C16:0, 10Me-C16:0 [8792].
Quinone: MK-8(H4) [8792].
Polar lipid: PE, PC, DPG (type PIII) [8792].
G+C (mol%): 74 (HPLC) [8792].
DNA-DNA relatedness: [8792].
Phylogeny: 16S rRNA gene (AB514513) [8792].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Acinetobacter puyangensis
JCM number: 18011 <-- Y. Li BQ4-1.
Source: Healthy part of symptomatic bark of Populus x euramericana canker (1 cm from a lesion margin) collected from Puyang City, Henan Province, China, during July 2010 [9600].
Biochemistry/Physiology: [9600].
Chemotaxonomy: [9600].
DNA-DNA relatedness: [9600].
Phylogeny: 16S rRNA gene (JN664255) [9600], gyrB (JQ411219) [9600], rpoB (JX499272) [9600].

Publication(s) using this strain [B13282, B17054].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Streptomyces barkulensis
JCM number: 18754 <-- V. Raina RC 1831.
Source: Sediment of a fish dumping yard at Barkul Village near Chilika Lake, Odisha, India [9958].
Biochemistry/Physiology: [9958].
Cell wall: LL-A2pm (chemotype I); Glc, Rib [9958].
Fatty acid: a-C15:0, i-C16:0, n-C16:0, i-C14:0 [9958].
Quinone: MK-9(H6), MK-9(H8), MK-9(H4) [9958].
Polar lipid: DPG, PE, PI, PIM, PL [9958].
G+C (mol%): 66.2 (Tm) [9958].
DNA-DNA relatedness: [9958].
Phylogeny: 16S rRNA gene (JQ862602) [9958].
Genome sequence: PDKQ00000000, PGSG00000000.

Publication(s) using this strain [C14231, B16452].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sporolactobacillus shoreae
JCM number: 19541 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; BK92.
Source: White-Meranti (Shorea talura Roxb.) tree barks, Rayong Province, Thailand [10440].
Biochemistry/Physiology: [10440].
Cell wall: [10440].
Fatty acid: [10440].
Quinone: MK-7 [10440].
G+C (mol%): 46.6 (HPLC) [10440].
DNA-DNA relatedness: [10440].
Phylogeny: 16S rRNA gene (AB911245), gyrB (AB917308) [10440].
 
open link in new window

open link in new window

Publication(s) using this strain [B15221].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Sporolactobacillus spathodeae
JCM number: 19542 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; BK117-1.
Source: African Tulip (Spathodea campanulata P. Beauv.) tree barks, Bangkok, Thailand [10440].
Biochemistry/Physiology: [10440].
Cell wall: [10440].
Fatty acid: [10440].
Quinone: MK-7 [10440].
G+C (mol%): 47.4 (HPLC) [10440].
DNA-DNA relatedness: [10440].
Phylogeny: 16S rRNA gene (AB911246), gyrB (AB917309) [10440].
 
open link in new window

open link in new window

Publication(s) using this strain [B15221].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypocrea jecorina
JCM number: 22988 <-- IAM 14456 <-- USDA, GJS 86-404.
Distribution to users in Japan is controlled by the Plant Protection Law.
Source: Bark.
Locality: French Guiana [6977].
Taxonomy: [6977].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Trichoderma aureoviride
JCM number: 23184 <-- IAM 14953 <-- G. Oros; Plant Prot. Inst., Hungarian Acad. of Sci., Hungary.
Source: Oak bark.
Locality: Eger, Hungary.

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30256 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 06035.
Source: Bark of Pinus densiflora [11080].
Locality: Lake Kanayama, Utsutsumi, Kamogawa, Chiba, Japan [11080].
Morphology: [11080].
More information: Herbarium specimen KPM-NC0023581 [11080].
 
open link in new window

Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30257 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 10092.
Source: Bark of Abies firma [11080].
Locality: Rokudoyama Park, Noyamakita, Musashimurayama, Tokyo, Japan [11080].
More information: Herbarium specimen KPM-NC0023582 [11080].
 
open link in new window

Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30258 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 11132.
Source: Bark of Abies firma [11080].
Locality: Mt. Tsukuba, Tsukuba, Ibaraki, Japan [11080].
More information: Herbarium specimen KPM-NC0023583 [11080].
 
open link in new window

Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30259 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 13158.
Source: Bark of Pinus thunbergii [11080].
Locality: Fureai-hiroba, Mikura-jima, Tokyo, Japan [11080].
More information: Herbarium specimen KPM-NC0023585 [11080]; Producing sectors in colony.
 
open link in new window

Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Hypomyces khaoyaiensis
JCM number: 30260 <-- T. Tokiwa; Environ. Hyg. Inspect. Center, Japan; KS 13488.
Source: Bark of Pinus densiflora [11080].
Locality: Central Park, Tsuzuki, Yokohama, Kanagawa, Japan [11080].
More information: Herbarium specimen KPM-NC0023586 [11080].
 
open link in new window

Publication(s) using this strain [C16509].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Actinoplanes lichenis
JCM number: 30485 <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; LDG1-22.
Source: Lichen from tree bark, Thailand [10916].
Biochemistry/Physiology: [10916].
Cell wall: meso-A2pm; Rib, Glc, Man, Ara, Xyl [10916].
Fatty acid: a-C15:0, i-C16:0 [10916].
Quinone: MK-9(H4) [10916].
Polar lipid: DPG, PE, PI, PIMs, PG [10916].
G+C (mol%): 73.6 (HPLC) [10916].
DNA-DNA relatedness: [10916].
Phylogeny: 16S rRNA gene (LC033899) [10916].

Publication(s) using this strain [B16288].
Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dictyocatenulata alba
JCM number: 31295 <-- G. Okada; RIKEN BRC-JCM, Japan; OFC 5367.
Source: Peeling bark of living big Zelkova serrata (coll. on 6 Nov 2012).
Locality: Kuragafuchi, Shioda, Ueda, Nagano, Japan.
More information: Identified by G. Okada.
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dictyocatenulata alba
JCM number: 31297 <-- G. Okada; RIKEN BRC-JCM, Japan; OFC 5369.
Source: Peeling bark of living big Zelkova serrata (coll. on 14 Nov 2015).
Locality: Kuragafuchi, Shioda, Ueda, Nagano, Japan.
More information: Identified by G. Okada.
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dipodascus aggregatus
JCM number: 31687 <-- NRRL Y-17564 <-- CBS 175.53 <-- H. Francke-Grosmann.
Source: Pupal chamber of bark beetle Ips acuminatus (Coleoptera, Scolytidae) in scots pine Pinus sylvestris (Pinales, Pinaceae).
Locality: West Germany.
Phylogeny: D1/D2 region of LSU rRNA gene (U40120), SSU rRNA gene (AB000645), ITS & 5.8S rRNA gene (AY788294).
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Dipodascus australiensis
JCM number: 31688 <-- NRRL Y-17565 <-- CBS 625.74 <-- J. S. F. Barker; Univ. of Sydney, Australia.
Source: Rotting cladodes of cactus Opuntia inermis (Caryophyllales, Cactaceae).
Locality: Australia.
Phylogeny: D1/D2 region of LSU rRNA gene (U40100), SSU rRNA gene (AB000643).
 
open link in new window

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Microlunatus endophyticus
JCM number: 31774 <-- CGMCC 4.7306 <-- L. Tuo; Inst. of Med. Biotechnol., Chin. Acad. Med. Sci. & Peking Union Med. Coll., China; S3Af-1.
Source: Surface-sterilized bark of Bruguiera sexangula from Dongzhaigang National Nature Reserve, Hainan, China [11209].
Biochemistry/Physiology: [11209].
Cell wall: LL-A2pm [11209].
Fatty acid: i-C16:0, a-C17:0, a-C15:0 [11209].
Quinone: MK-9(H6), MK-9(H4) [11209].
Polar lipid: PG, DPG, GL, PLs [11209].
G+C (mol%): 67.1 (HPLC) [11209].
DNA-DNA relatedness: [11209].
Phylogeny: 16S rRNA gene (KT749873) [11209].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nakamurella endophytica
JCM number: 31778 <-- CGMCC 4.7308 <-- L. Tuo; Inst. of Med. Biotechnol., Chin. Acad. Med. Sci. & Peking Union Med. Coll., China; 2Q3S-4-2.
Source: Surface-sterilized bark of Kandelia candel from Cotai Ecological Zones, Macao, China [11213].
Biochemistry/Physiology: [11213].
Cell wall: meso-A2pm [11213].
Fatty acid: i-C16:0, a-C15:0, a-C17:0, n-C16:0 [11213].
Quinone: MK-8(H4) [11213].
Polar lipid: DPG, PE, APLs, PI [11213].
G+C (mol%): 67.8 (HPLC) [11213].
Phylogeny: 16S rRNA gene (KT971019) [11213].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Phycicoccus endophyticus
JCM number: 31784 <-- CGMCC 4.7300 <-- S.-W. Liu; Inst. of Med. Biotechnol., Chin. Acad. Med. Sci. & Peking Union Med. Coll., China; IP6SC6.
Source: Surface-sterilized bark of Bruguiera gymnorhiza from Zhanjiang Mangrove Forest National Nature Reserve, Guangdong, China [11211].
Biochemistry/Physiology: [11211].
Cell wall: meso-A2pm; Gal, Glc [11211].
Fatty acid: i-C15:0, a-C15:0, a-C17:0, i-C16:0 [11211].
Quinone: MK-8(H4) [11211].
Polar lipid: DPG, PI [11211].
G+C (mol%): 72.5 (HPLC) [11211].
Phylogeny: 16S rRNA gene (KT327645) [11211].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Nesterenkonia populi
JCM number: 31979 <-- DSM 27959 <-- C.-H. Sun; Inst. of Med. Biotechnol., Chin. Acad. Med. Sci. & Peking Union Med. Coll., China; GP10-3.
Source: Bark of Populus euphratica on the southern edge of the Taklimakan Desert, Xinjiang, China [11494].
Biochemistry/Physiology: [11494].
Cell wall: Type A4α (L-Lys-L-Glu) [11494].
Fatty acid: a-C17:0, a-C15:0, i-C16:0 [11494].
Quinone: MK-8, MK-7 [11494].
Polar lipid: DPG, PG, PGL, PC, PI, GL, PL [11494].
G+C (mol%): 67.4 (HPLC) [11494].
Phylogeny: 16S rRNA gene (KP057085) [11494].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
Brachybacterium endophyticum
JCM number: 33403 <-- CGMCC 1.16391 <-- L. Tuo; Zunyi Med. Univ., China; M1HQ-2.
Source: Surface-sterilized bark of Scutellaria baicalensis Georgi from Guizhou, China [12412].
Biochemistry/Physiology: [12412].
Cell wall: meso-A2pm [12412].
Fatty acid: a-C15:0, a-C17:0, i-C16:0 [12412].
Quinone: MK-7 [12412].
Polar lipid: DPG, PG, PL, L [12412].
G+C (mol%): 71.0 (genome sequence) [12412].
Phylogeny: 16S rRNA gene (MH289757) [12412].
Other taxonomic data: Average nucleotide identity, genome-to-genome distances [12412].
Genome sequence: QFKX00000000 [12412].

Delivery category: Domestic, A or C; Overseas, A or C.
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
- Instructions for an order
- Go to JCM Top Page