JCM Catalogue

Tetragenococcus halophilus subsp. halophilus (Mees 1934) Justé et al. 2012
Taxonomy in NCBI database: Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae.
5888T <-- ATCC 33315 <-- NCDO 1635 <-- B. Coster <-- Tech. Hogesch., Delft.
Accessioned in 1986.
=ATCC 33315 =BCRC 12550 =CCM 3458 =CCUG 32204 =CECT 4792 =CIP 102263 =DSM 20339 =IAM 1676 =IAM 12284 =LMG 11490 =NBRC 100498 =NCDO 1635 =NCFB 1635 =NCIMB 12011.
Tetragenococcus halophilus.
Pediococcus halophilus.
Type strain [596,1776,2779,4031,8036].
Medium: 509;  Temperature: 30°C; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top

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Biochemistry/Physiology: [8036].
Cell wall: [639].
Fatty acid: [2462].
G+C (mol%): 36.8 [2462].
DNA-DNA relatedness: [2229,8036].
Phylogeny: 16S rRNA gene (AB596938, AJ301843, D88668, LC071840) [4435,8036].
DNA typing: RAPD [8036].
Genome sequence: PXYA00000000.
NCBI Assembly ID: GCA_003841405 (GenBank), GCF_003841405 (RefSeq).
BacDive ID: 5255.
NCBI Taxonomy ID: 51669.
Publication(s) using this strain [A04172, A05140, A05177, A08224, A08246, A09228, A14427].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
2015 <-- C. Kaneuchi <-- K. Komagata <-- S. Tanasupawat Ph-63.
Accessioned in 1983.
Tetragenococcus halophilus.
Pediococcus halophilus.
Medium: 509;  Temperature: 30°C; Rehydration fluid: 663.   more information +
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Source: Pla-chom (fermented small fish) [1217].
Biochemistry/Physiology: [1217,8036].
Fatty acid: [2462].
G+C (mol%): 36.6 [2462].
DNA-DNA relatedness: [8036].
Phylogeny: 16S rRNA gene (AB911538, EU689058, LC269259) [8036].
DNA typing: RAPD [8036].
BacDive ID: 162786.
Publication(s) using this strain [A08183, A11069, A12125, A14427].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
20245 <-- IAM 1673 <-- H. Iizuka and K. Yamasato PS-2 ("Pediococcus soyae").
Accessioned in 2007.
=ATCC 13621 =IAM 1673.
Tetragenococcus halophilus.
Pediococcus halophilus.
Medium: 1, 69, 72;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Shoyu moromi [6754].
Biochemistry/Physiology: [8036].
DNA-DNA relatedness: [2195,8036].
Phylogeny: 16S rRNA gene (AB911543, EU689054) [8036].
DNA typing: RAPD [8036].
Taxonomy: [6682].
BacDive ID: 162820.
Publication(s) using this strain [A14427].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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