JCM Catalogue

Sphingopyxis macrogoltabida (Takeuchi et al. 1993) Takeuchi et al. 2001
Taxonomy in NCBI database: Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae.
10192T <-- IFO 15033 <-- F. Kawai 203.
Accessioned in 1998.
=ATCC 51380 =CIP 104196 =DSM 8826 =IAM 14459 =IFO 15033 =KCTC 2813 =LMG 17324 =NBRC 15033.
Sphingomonas macrogoltabidus.
Type strain [2723,4302].
Medium: 346;  Temperature: 30°C; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top
Biochemistry/Physiology: [4302,5481,5482].
Fatty acid: [4302,5481,5482].
Quinone: Q-10 [4302].
Polar lipid: Sphingolipid [4302].
G+C (mol%): 63.9 (HPLC) [4302].
Phylogeny: 16S rRNA gene (D13723) [4302], 16S rRNA gene (AB680753, D84530).
Taxonomy: [5481,5482].
Genome sequence: CP009429, CP009430 (plasmid), CP009431 (plasmid) [12014].
NCBI Assembly ID: GCA_001610995 (GenBank), GCF_001610995 (RefSeq).
BacDive ID: 14274.
NCBI Taxonomy ID: 33050.
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
13904 <-- F. Kawai EY-1.
Accessioned in 2006.
=NBRC 111642.
Sphingomonas macrogoltabidus.
Medium: 12;  Temperature: 28°C; Rehydration fluid: 663.   more information +
Source: Activated sludge from an industrial plant, Japan [11975].
Phylogeny: 16S rRNA gene (AB255383) [11975].
Genome sequence: CP012700, CP012701 (plasmid 1), CP012702 (plasmid 2), CP012703 (plasmid 3), CP012704 (plasmid 4), CP012705 (plasmid 5) [12013].
NCBI Assembly ID: GCA_001307295 (GenBank), GCF_001307295 (RefSeq).
BacDive ID: 161416.
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
15108 <-- F. Kawai K1.
Accessioned in 2008.
Sphingomonas macrogoltabidus.
Medium: 27;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Soil in the Kansai region, Japan.
DNA-DNA relatedness: [12201].
Phylogeny: 16S rRNA gene (AB372255) [12201].
BacDive ID: 161570.
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
15109 <-- F. Kawai N6.
Accessioned in 2008.
Sphingomonas macrogoltabidus.
Medium: 27;  Temperature: 30°C; Rehydration fluid: 663.   more information +
Source: Soil in the Kansai region, Japan.
DNA-DNA relatedness: [12201].
Phylogeny: 16S rRNA gene (AB372254) [12201].
More information: Polyethylene glycol and diglycolic acid dehydrogenase activities [12202].
BacDive ID: 161571.
 Related information on delivery / use of the strain
Biosafety level 1 -
Terms and conditions Imposed
Export control (1) No -
Distribution control in Japan (2) No -
Genetically modified microorganism No -
Technical information - -
Additional information - -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.
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