JCM Catalogue


Sphingomonas yanoikuyae Yabuuchi et al. 1990

Taxonomy in NCBI database: Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae.

7371 <-- GIFU 9882 <-- Y. Bruun AB 1105.
Accessioned in 1988.
=ATCC 51230 =CCM 4600 =CCUG 28380 =CCUG 31205 =CIP 106726 =DSM 7462 =GIFU 9882 =IAM 14269 =IFO 15102 =LMG 11252 =NBRC 15102 =PCM 2582.
Sphingomonas yanoikuyae.
Type strain [3139].
Medium: 12;  Temperature: 37°C; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top

Source: Clinical specimen [3139].
Biochemistry/Physiology: [3139,5481,5482].
Numerical taxonomy: [3139].
Fatty acid: [5481,5482].
Quinone: Q-10 [3139].
G+C (mol%): 61.7 (HPLC) [3139].
DNA-DNA relatedness: [3139].
Phylogeny: 16S rRNA [3139], 16S rRNA gene (D13728, D16145).
Taxonomy: [5481,5482].
Genome sequence: AGZU00000000.
NCBI Assembly ID: GCA_000315525 (GenBank), GCF_000315525 (RefSeq).
BacDive ID: 14180.
NCBI Taxonomy ID: 13690.

Publication(s) using this strain [A06237, A08211, A14120, A14488, A19049].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

10196 <-- IFO 15163 <-- NCTC 10590 <-- K. A. Bettelheim <-- J. F. Gordon Pn 4S.
Accessioned in 1998.
=IAM 14225 =IFO 15163 =KCTC 2819 =NBRC 15163 =NCTC 10590.
Sphingomonas yanoikuyae.
Medium: 75;  Temperature: 30°C; Rehydration fluid: 663.   more information +

Biochemistry/Physiology: [4303].
Quinone: Q-10 [4303].
Polar lipid: Sphingolipid [4303].
G+C (mol%): 64.0 (HPLC) [4303].
DNA-DNA relatedness: [4303].
Phylogeny: 16S rRNA gene (D13946).
BacDive ID: 14179.

 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

10197 <-- IFO 15164 <-- NCTC 10591 <-- K. A. Bettelheim <-- J. F. Gordon Ac 3S.
Accessioned in 1998.
=IFO 15164 =KCTC 2820 =NBRC 15164 =NCTC 10591.
Sphingomonas yanoikuyae.
Medium: 75;  Temperature: 30°C; Rehydration fluid: 663.   more information +

Biochemistry/Physiology: [4303].
Quinone: Q-10 [4303].
Polar lipid: Sphingolipid [4303].
G+C (mol%): 64.9 (HPLC) [4303].
DNA-DNA relatedness: [4303].
Phylogeny: 16S rRNA gene (LC506140).
BacDive ID: 14178.

 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

21084 <-- IAM 14226 <-- NCTC 10591 ("Chromobacterium lividum") <-- K. A. Bettelheim <-- J. F. Gordon.
Accessioned in 2007.
=IAM 14226 =IFO 15164 =NBRC 15164 =NCTC 10591.
Sphingomonas yanoikuyae.
Medium: 22;  Temperature: 30°C; Rehydration fluid: 663.   more information +

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Source: Ardisia crispa.

 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

This product was produced by the IAM Culture Collection (IAM) and transferred to JCM in 2007. Viability and purity assays were performed by IAM at the time of production but note that the authenticity has not yet been checked by gene sequencing. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

30198 <-- DSM 6900 <-- D. T. Gibson B1 (Beijerinckia sp.).
Accessioned in 2014.
=DSM 6900.
Sphingomonas yanoikuyae.
Medium: 27, 346;  Temperature: 30°C; Rehydration fluid: 663.   more information +

BacDive ID: 14177.

Patent publication(s) using this strain [2016-146779].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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