JCM Catalogue


Rhizobium japonicum (Kirchner 1896) Buchanan 1926

Taxonomy in NCBI database: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae.

20679 <-- IAM 12608 <-- ATCC 10324 <-- L. W. Erdman 3I1b6.
Accessioned in 2007.
=ATCC 10324 =BCRC 13518 =BCRC 80814 =CCTM La 3681 =CCUG 27876 =CECT 530 =CIP 106093 =DSM 30131 =HAMBI 2314 =IAM 12608 =ICMP 2864 =LMG 6138 =NBRC 14783 =NCIMB 11477 =NRRL L-241 =NRRL B-4507 =NZP 5549 =OUT 30002 =USDA 505 =VKM B-1967.
Rhizobium japonicum.
Type strain [596].
Medium: 254;  Temperature: 25°C; Rehydration fluid: 663.   more information +  Full / Short version of the cataloguepage top

Phylogeny: 16S rRNA gene (D11345, D12781).
Genome sequence: BJNK00000000.
NCBI Assembly ID: GCA_006539645 (GenBank), GCF_006539645 (RefSeq).
BacDive ID: 1805.
NCBI Taxonomy ID: 375.

Publication(s) using this strain [A13111].
Patent publication(s) using this strain [WO2020/130095].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

10834 <-- K. Minamisawa <-- H. H. Keyser USDA 123.
Accessioned in 2000.
=USDA 123.
Rhizobium japonicum.
Medium: 254;  Temperature: 30°C; Rehydration fluid: 663.   more information +

Source: Root nodules of Glycine max.
Phylogeny: 16S rRNA gene (AF363151).
Genome sequence: AXVP00000000.
NCBI Assembly ID: GCA_000482525 (GenBank), GCF_000482525 (RefSeq).
BacDive ID: 161077.

 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

10833 <-- K. Minamisawa <-- H. H. Keyser USDA 110.
Accessioned in 2000.
=ACCC 15034 =BCRC 13528 =CCT 4249 =IAM 13628 =NBRC 14792 =NRRL B-4450 =NRRL B-4361 =SEMIA 5032 =TISTR 339 =USDA 110.
Bradyrhizobium japonicum.
Rhizobium japonicum.
Type strain [9808].
Medium: 254;  Temperature: 30°C; Rehydration fluid: 663.   more information +

Source: Root nodules of Glycine max, FL, USA.
Biochemistry/Physiology: [9808].
G+C (mol%): 64.1 (genome sequence) [8964].
Phylogeny: 16S rRNA gene (AB909430, AF363150, D13430).
Taxonomy: [9808].
Genome sequence: BA000040 [8964], CP011360.
NCBI Assembly ID: GCA_001642675 (GenBank), GCF_001642675 (RefSeq).
BacDive ID: 133983.
NCBI Taxonomy ID: 1355477.
Genomic DNA is available from RIKEN BRC-DNA Bank: JGD08463.

Publication(s) using this strain [A13115, A13144].
Patent publication(s) using this strain [WO2020/130095].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

10832 <-- K. Minamisawa <-- H. H. Keyser USDA 94.
Accessioned in 2000.
=USDA 94.
Bradyrhizobium japonicum.
Rhizobium japonicum.
Medium: 254;  Temperature: 30°C; Rehydration fluid: 663.   more information +

Source: Root nodules of Glycine max, NC, USA.
Phylogeny: 16S rRNA gene (AF363152, D13429).
Genome sequence: JAFC00000000.
NCBI Assembly ID: GCA_000519225 (GenBank), GCF_000519225 (RefSeq).
BacDive ID: 161076.

Publication(s) using this strain [A13115].
Patent publication(s) using this strain [WO2020/130095].
 Related information on delivery / use of the strain
Biosafety level 1
Terms and conditions Not applicable
Export control (1) No
Distribution control in Japan (2) No
Genetically modified microorganism No
Technical information -
Additional information -
 (1) in complying with the Foreign Exchange and Foreign Trade Control Law of Japan
 (2) in complying with the Plant Protection Law of Japan

 Delivery category
Domestic A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)
Overseas A (Freeze-dried or L-dried culture) or C (Actively growing culture on request)

Viability and purity assays of this product were performed at the time of production as part of quality control. The authenticity of the culture was confirmed by analyzing an appropriate gene sequence, e.g., the 16S rRNA gene for prokaryotes, the D1/D2 region of LSU rRNA gene, the ITS region of the nuclear rRNA operon, etc. for eukaryotes. The characteristics and/or functions of the strain appearing in the catalogue are based on information from the corresponding literature and JCM does not guarantee them.

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